Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169165130
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169165130 PREDICTED: hypothetical protein [Homo sapiens]
(1002 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169165130 PREDICTED: hypothetical protein [Homo sapiens] 2043 0.0
gi|169166139 PREDICTED: similar to predicted protein [Homo sapiens] 2016 0.0
gi|167736355 mucin 4 isoform a [Homo sapiens] 62 2e-09
gi|116292174 fidgetin-like 2 [Homo sapiens] 40 0.011
gi|225690497 tight junction associated protein 1 isoform b [Homo... 39 0.032
gi|225690495 tight junction associated protein 1 isoform b [Homo... 39 0.032
gi|225690493 tight junction associated protein 1 isoform b [Homo... 39 0.032
gi|225690491 tight junction associated protein 1 isoform b [Homo... 39 0.032
gi|225690489 tight junction associated protein 1 isoform a [Homo... 39 0.032
gi|225690487 tight junction associated protein 1 isoform a [Homo... 39 0.032
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 38 0.042
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 38 0.042
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 38 0.054
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 37 0.071
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 37 0.071
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens] 37 0.093
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 36 0.16
gi|195947369 junction-mediating and regulatory protein [Homo sap... 36 0.21
gi|12707580 paired-like homeobox 2b [Homo sapiens] 35 0.27
gi|87299628 biorientation of chromosomes in cell division 1-like... 35 0.27
gi|222831660 family with sequence similarity 171, member A2 [Hom... 35 0.35
gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens] 35 0.46
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.46
gi|110832843 TBP-associated factor 4 [Homo sapiens] 34 0.60
gi|52485606 formin-like 2 [Homo sapiens] 34 0.60
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 34 0.60
gi|21361825 G protein-coupled receptor 137 [Homo sapiens] 34 0.79
gi|239747120 PREDICTED: hypothetical protein XP_002343918 [Homo ... 33 1.0
gi|239747111 PREDICTED: hypothetical protein XP_002343913 [Homo ... 33 1.0
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 33 1.0
>gi|169165130 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1002
Score = 2043 bits (5292), Expect = 0.0
Identities = 1002/1002 (100%), Positives = 1002/1002 (100%)
Query: 1 MRTAAQAPRSTQQVSANDGTHAPAQQATAVYLQVGVDGGDLRGAAGRHPGPDDLNGRVRR 60
MRTAAQAPRSTQQVSANDGTHAPAQQATAVYLQVGVDGGDLRGAAGRHPGPDDLNGRVRR
Sbjct: 1 MRTAAQAPRSTQQVSANDGTHAPAQQATAVYLQVGVDGGDLRGAAGRHPGPDDLNGRVRR 60
Query: 61 GVLQGRISGARLPVTWQPGGTAACLQVLSPGLPVSGLRPEDCLTERQHSPTLLRGAAGWE 120
GVLQGRISGARLPVTWQPGGTAACLQVLSPGLPVSGLRPEDCLTERQHSPTLLRGAAGWE
Sbjct: 61 GVLQGRISGARLPVTWQPGGTAACLQVLSPGLPVSGLRPEDCLTERQHSPTLLRGAAGWE 120
Query: 121 GHLLMRPRPCEASGSHSTECSFTDFTNNREQPSSPESCSPGAAIQPRCSWATCVLKFTLP 180
GHLLMRPRPCEASGSHSTECSFTDFTNNREQPSSPESCSPGAAIQPRCSWATCVLKFTLP
Sbjct: 121 GHLLMRPRPCEASGSHSTECSFTDFTNNREQPSSPESCSPGAAIQPRCSWATCVLKFTLP 180
Query: 181 SEDMQYPESSPRWPSLTCSRLASSLRCGPRMVAEAFGTATHRAQHGPRLSGRARANTLAL 240
SEDMQYPESSPRWPSLTCSRLASSLRCGPRMVAEAFGTATHRAQHGPRLSGRARANTLAL
Sbjct: 181 SEDMQYPESSPRWPSLTCSRLASSLRCGPRMVAEAFGTATHRAQHGPRLSGRARANTLAL 240
Query: 241 SCRLLFLSRASRSATDTKIPHGSWKPDLVRSDSCVGRTGAEMTLSSLYASACRQQCLFWT 300
SCRLLFLSRASRSATDTKIPHGSWKPDLVRSDSCVGRTGAEMTLSSLYASACRQQCLFWT
Sbjct: 241 SCRLLFLSRASRSATDTKIPHGSWKPDLVRSDSCVGRTGAEMTLSSLYASACRQQCLFWT 300
Query: 301 RAPKDKAPSSGGFYNLHRAEPVQVWYKHRPVNQRWHQRELCAGQTAMSSVFVPELAPTAT 360
RAPKDKAPSSGGFYNLHRAEPVQVWYKHRPVNQRWHQRELCAGQTAMSSVFVPELAPTAT
Sbjct: 301 RAPKDKAPSSGGFYNLHRAEPVQVWYKHRPVNQRWHQRELCAGQTAMSSVFVPELAPTAT 360
Query: 361 SPLTAPPQSISTGEDARKGRKGLAVSISVTDRASEIRCCTCLPKGLAVSIGVTDRASEIH 420
SPLTAPPQSISTGEDARKGRKGLAVSISVTDRASEIRCCTCLPKGLAVSIGVTDRASEIH
Sbjct: 361 SPLTAPPQSISTGEDARKGRKGLAVSISVTDRASEIRCCTCLPKGLAVSIGVTDRASEIH 420
Query: 421 CRTCLLKGLAVSIGVPDRASETRCRTCLPKGLAVSIGVTDRAPEIIRCRTCLPEGLAVSI 480
CRTCLLKGLAVSIGVPDRASETRCRTCLPKGLAVSIGVTDRAPEIIRCRTCLPEGLAVSI
Sbjct: 421 CRTCLLKGLAVSIGVPDRASETRCRTCLPKGLAVSIGVTDRAPEIIRCRTCLPEGLAVSI 480
Query: 481 GVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPKGLAVSIGVTDRAPEIIRC 540
GVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPKGLAVSIGVTDRAPEIIRC
Sbjct: 481 GVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPKGLAVSIGVTDRAPEIIRC 540
Query: 541 LCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIGVTDRAPEIIRCRTCFPKGLA 600
LCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIGVTDRAPEIIRCRTCFPKGLA
Sbjct: 541 LCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIGVTDRAPEIIRCRTCFPKGLA 600
Query: 601 VSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSIGVTDRA 660
VSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSIGVTDRA
Sbjct: 601 VSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSIGVTDRA 660
Query: 661 PEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSVGVTDGASEIRCRTCLLEG 720
PEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSVGVTDGASEIRCRTCLLEG
Sbjct: 661 PEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSVGVTDGASEIRCRTCLLEG 720
Query: 721 LAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRCRTCLLEGLAVSVGITDRASE 780
LAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRCRTCLLEGLAVSVGITDRASE
Sbjct: 721 LAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRCRTCLLEGLAVSVGITDRASE 780
Query: 781 IIRCCTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSIGVTDRASEIRCHTCLPKGLA 840
IIRCCTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSIGVTDRASEIRCHTCLPKGLA
Sbjct: 781 IIRCCTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSIGVTDRASEIRCHTCLPKGLA 840
Query: 841 VSLSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQLPCAWDPERRSHFSLQSNVPL 900
VSLSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQLPCAWDPERRSHFSLQSNVPL
Sbjct: 841 VSLSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQLPCAWDPERRSHFSLQSNVPL 900
Query: 901 DPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQAEG 960
DPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQAEG
Sbjct: 901 DPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQAEG 960
Query: 961 DADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQHE 1002
DADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQHE
Sbjct: 961 DADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQHE 1002
>gi|169166139 PREDICTED: similar to predicted protein [Homo sapiens]
Length = 1022
Score = 2016 bits (5223), Expect = 0.0
Identities = 997/1022 (97%), Positives = 999/1022 (97%), Gaps = 20/1022 (1%)
Query: 1 MRTAAQAPRSTQQVSANDGTHAPAQQATAVYLQVGVDGGDLRGAAGRHPGPDDLNGRVRR 60
MRTAAQAPRSTQQVSANDGTHAPAQQATAVYLQVGVDGGDLRGAAGRHPGPDDLNGRVRR
Sbjct: 1 MRTAAQAPRSTQQVSANDGTHAPAQQATAVYLQVGVDGGDLRGAAGRHPGPDDLNGRVRR 60
Query: 61 GVLQGRISGARLPVTWQPGGTAACLQVLSPGLPVSGLRPEDCLTERQHSPTLLRGAAGWE 120
GVLQGRISGARLPVTWQPGGTAACLQVLSPGLPVSGLRPEDCLTERQHSPTLLRGAAGWE
Sbjct: 61 GVLQGRISGARLPVTWQPGGTAACLQVLSPGLPVSGLRPEDCLTERQHSPTLLRGAAGWE 120
Query: 121 GHLLMRPRPCEASGSHSTECSFTDFTNNREQPSSPESCSPGAAIQPRCSWAT-------- 172
GHLLMRPRPCEASGSHSTECSFTDFTNNREQPSSPESCSPGAAIQPRCSWA+
Sbjct: 121 GHLLMRPRPCEASGSHSTECSFTDFTNNREQPSSPESCSPGAAIQPRCSWASAFARGGFS 180
Query: 173 ------------CVLKFTLPSEDMQYPESSPRWPSLTCSRLASSLRCGPRMVAEAFGTAT 220
CVLKFTLPSEDMQYPESSPRWPSLTCSRLASSLRCGPRMVAEAFGTAT
Sbjct: 181 CVLSSADGLSLACVLKFTLPSEDMQYPESSPRWPSLTCSRLASSLRCGPRMVAEAFGTAT 240
Query: 221 HRAQHGPRLSGRARANTLALSCRLLFLSRASRSATDTKIPHGSWKPDLVRSDSCVGRTGA 280
HRAQHGPRLSGRARANTLALSCRLLFLSRASRSATDTKIPHGSWKPDLVRSDSCVGRTGA
Sbjct: 241 HRAQHGPRLSGRARANTLALSCRLLFLSRASRSATDTKIPHGSWKPDLVRSDSCVGRTGA 300
Query: 281 EMTLSSLYASACRQQCLFWTRAPKDKAPSSGGFYNLHRAEPVQVWYKHRPVNQRWHQREL 340
EMTLSSLYASACRQQCLFWTRAPKDKAPSSGGFYNLHRAEPVQVWYKHRPVNQRWHQREL
Sbjct: 301 EMTLSSLYASACRQQCLFWTRAPKDKAPSSGGFYNLHRAEPVQVWYKHRPVNQRWHQREL 360
Query: 341 CAGQTAMSSVFVPELAPTATSPLTAPPQSISTGEDARKGRKGLAVSISVTDRASEIRCCT 400
CAGQTAMSSVFVPELAPTATSPLTAPPQSISTGEDARKGRKGLAVSISVTDRASEIRCCT
Sbjct: 361 CAGQTAMSSVFVPELAPTATSPLTAPPQSISTGEDARKGRKGLAVSISVTDRASEIRCCT 420
Query: 401 CLPKGLAVSIGVTDRASEIHCRTCLLKGLAVSIGVPDRASETRCRTCLPKGLAVSIGVTD 460
CLPKGLAVSIGVTDRASEIHCRTCLLKGLAVSIGVPDRASETRCRTCLPKGLAVSIGVTD
Sbjct: 421 CLPKGLAVSIGVTDRASEIHCRTCLLKGLAVSIGVPDRASETRCRTCLPKGLAVSIGVTD 480
Query: 461 RAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCL 520
RAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLP+GLAVSIGVTDRAPEIIRCRTCL
Sbjct: 481 RAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPKGLAVSIGVTDRAPEIIRCRTCL 540
Query: 521 PKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIG 580
KGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIG
Sbjct: 541 LKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIG 600
Query: 581 VTDRAPEIIRCRTCFPKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRAPEMI 640
VTDRAPEIIRC TCFPKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRAPEMI
Sbjct: 601 VTDRAPEIIRCCTCFPKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTDRAPEMI 660
Query: 641 RCRTCLPKGLAVSIGVTDRAPEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAV 700
RCRTCLPKGLAVSIGVTDRAPEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAV
Sbjct: 661 RCRTCLPKGLAVSIGVTDRAPEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAV 720
Query: 701 SVGVTDGASEIRCRTCLLEGLAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRC 760
SVGVTDGASEIRCRTCLLEGLAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRC
Sbjct: 721 SVGVTDGASEIRCRTCLLEGLAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRC 780
Query: 761 RTCLLEGLAVSVGITDRASEIIRCCTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSI 820
RTCLLEGLAVSVGITDRASEIIRC TCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSI
Sbjct: 781 RTCLLEGLAVSVGITDRASEIIRCRTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSI 840
Query: 821 GVTDRASEIRCHTCLPKGLAVSLSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQL 880
GVTDRASEIRCHTCLPKGLAVSLSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQL
Sbjct: 841 GVTDRASEIRCHTCLPKGLAVSLSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQL 900
Query: 881 PCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVA 940
PCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVA
Sbjct: 901 PCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVA 960
Query: 941 PLQRVGGDPAGGGADPQAEGDADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQ 1000
PLQRVGGDPAGGGADPQAEGDADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQ
Sbjct: 961 PLQRVGGDPAGGGADPQAEGDADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQ 1020
Query: 1001 HE 1002
HE
Sbjct: 1021 HE 1022
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 62.4 bits (150), Expect = 2e-09
Identities = 153/614 (24%), Positives = 216/614 (35%), Gaps = 97/614 (15%)
Query: 362 PLTAPPQSISTGE-------DARKGRKGLAVSISVTDRASEIRCCTCLPKGLAVSIGVTD 414
P+T+P S STG+ DA G S+ VT +S G S+ VTD
Sbjct: 1810 PVTSP-SSASTGDTTPLPVTDASSASTGDTTSLPVTIPSSA-------SSGHTTSLPVTD 1861
Query: 415 RASEIHCRTCLLKGLAVSIGVPDRAS-ETRCRTCLPKGLAVSIGVTDRAPEIIRCRTCLP 473
+S + G A S+ V D +S T T LP S D P + + +
Sbjct: 1862 ASS-------VSTGHATSLLVTDASSVSTGDTTPLPVTDTNSASTGDTTPLHVTDASSVS 1914
Query: 474 EGLAVSIGVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPKGLAVSIGVTDR 533
G A S+ VT + T LP S P + + +P G A S+ VTD
Sbjct: 1915 TGHATSLPVTSLSSASTGDTTPLPVTSPSSASSGHTTPLPVTDASSVPTGHATSLPVTD- 1973
Query: 534 APEIIRCLCCRTCLQKGLAVSIGVTDRVPEIIRCRTCLPKGLAVSIGVTDRAPEIIRCRT 593
+ + G A + VTD T LP S+ P + +
Sbjct: 1974 ----------ASSVSTGHATPLPVTDASSVSTGHATPLPVTDTSSVSTGQATPLPVTSLS 2023
Query: 594 CFPKGLAVSIGVTDRA--------PEIIRCLCC-----RTCLQKGLAVSIGVTDRAPEMI 640
G + VTD + P + L T L S P ++
Sbjct: 2024 SASTGDTTPLPVTDTSSASTGQDTPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLV 2083
Query: 641 RCRTCLPKGLAVSIGVTDRAPEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAV 700
+ + G A S+ VTD + T L A S+ D P + + G
Sbjct: 2084 TDASSVSTGHATSLLVTDASSVSTGHATALHVTDASSLSTGDTTPLPVTSPSSASTGDTT 2143
Query: 701 SVGVTDGASEIRCRTCLLEGLAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRC 760
+ VTD +S + G A S+ +TD +S G A S+ VTD +S
Sbjct: 2144 PLPVTDTSS-------VSTGHATSLPVTDTSS--------ASTGHATSLPVTDTSS---- 2184
Query: 761 RTCLLEGLAVSVGITDRASEIIRCCTCLP--------KGLAVSVGITDRASEIIRCRTCL 812
G A + +TD +S T LP G A+ + +TD +S T L
Sbjct: 2185 ---ASTGHATPLPVTDTSSASTGQATPLPVTSPSSASTGHAIPLLVTDTSSASTGQATPL 2241
Query: 813 P--------KGLAVSIGVTDRASEIRCH-TCLPKGLAVSLSVTDRAS-EICCRTCLPKGL 862
P G + VTD +S H T LP S+S D + + G
Sbjct: 2242 PVTSLSSASTGDTTPLPVTDASSVSTGHATSLPVTSLSSVSTGDTTPLPVTSPSSASTGH 2301
Query: 863 AVSIGVTD--RASEIHCPQLPCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFR 920
A + VTD AS H LP S S PL P+T PS +S PL
Sbjct: 2302 ATPLHVTDASSASTGHATPLPVT----SLSSASTGDTTPL-PVTSPSSASTGHATPLHVT 2356
Query: 921 EGAA---GDWRPFP 931
+ ++ GD P P
Sbjct: 2357 DASSVSTGDTTPLP 2370
Score = 57.0 bits (136), Expect = 9e-08
Identities = 151/629 (24%), Positives = 210/629 (33%), Gaps = 80/629 (12%)
Query: 345 TAMSSVFVPELAPTATSPLTAPPQSISTGE-------DARKGRKGLAVSISVTDRASEIR 397
T SSVF ATS P S S+G DA G A S+ VTD +S
Sbjct: 2692 TDASSVFTGH----ATSLPVTIPSSASSGHTTPLPVTDASSVSTGHATSLPVTDASS--- 2744
Query: 398 CCTCLPKGLAVSIGVTDRASEI--HCRTCLLKGLA-VSIG------VPDRAS-ETRCRTC 447
+ G A + VTD +S H L L+ VS G V D +S T T
Sbjct: 2745 ----VSTGHATPLPVTDASSVSTGHATPLPLTSLSSVSTGDTTPLPVTDTSSASTGQATP 2800
Query: 448 LPKGLAVSIGVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPE--------G 499
LP S+ D P + + G A S+ VTD + T LP+ G
Sbjct: 2801 LPVTSLSSVSTGDTTPLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTG 2860
Query: 500 LAVSIGVTDRAPEIIRCRTCLPKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTD 559
A + VTD + I T LP SI P + + G A + VTD
Sbjct: 2861 HATLLPVTDTSSASIGHATSLPVTDTSSISTGHATPLHV---TSPSSASTGHATPLPVTD 2917
Query: 560 RV--------PEIIRCRTCLPKGLAVSIGVTDRAPEIIRCRTCFPKGLAVSIGVTDRAPE 611
P + + G A + VTD + T P S+ D P
Sbjct: 2918 TSSASTGHANPLHVTSPSSASTGHATPLPVTDTSSASTGHATPLPVTSLSSVSTGDTTPL 2977
Query: 612 IIRCLCCRTCLQKGLAVSIGVTDRAPEMIRCRTCLPKGLAVSIGVTDRAPEIVCCRTCLQ 671
+ + G + VTD + T LP S D P V +
Sbjct: 2978 PV---TSPSSASTGHTTPLPVTDTSSASTGQATALPVTSTSSASTGDTTPLPVTDTSSAS 3034
Query: 672 KGLAVSIGVT--------DRAPEMIRCRTCLPKGLAVSVGVTDGASEIRCRTCLLEGLAV 723
G A + VT D P + + G A + VTD +S + L ++
Sbjct: 3035 TGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDASSASTGQATPLPVTSL 3094
Query: 724 -SVGITDRASEIIRCRTCLPKGLAVSVSVTDGASEIRCRTCLLEGLAVSVGITDRASEII 782
SV D + + G A S+ VTD +S G S+ +TD +S
Sbjct: 3095 SSVSTGDTTPLPVTSPSSASTGHATSLPVTDTSS-------ASTGDTTSLPVTDTSSAYT 3147
Query: 783 RCCTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSIGVTDRASEIRCHTCLPKGLAVS 842
T LP S D ++ + + G A + VTD +S H A
Sbjct: 3148 GDTTSLPVTDTSSSSTGDTTPLLVTETSSVSTGHATPLLVTDASSASTGH-------ATP 3200
Query: 843 LSVTDRASEICCRTCLPKGLAVSIGVTDRASEIHCPQLPCAWDPERRSHFSLQSNVPLDP 902
L VT +S G + VTD +S P + + +P+
Sbjct: 3201 LHVTSPSS-------ASTGDTTPVPVTDTSSVSTGHATPLPVTGLSSASTGDTTRLPVTD 3253
Query: 903 ITEPSPSSPFPPPPLGFREGAAGDWRPFP 931
I+ S P P + GD P P
Sbjct: 3254 ISSASTGQATPLPVTNTSSVSTGDTMPLP 3282
Score = 41.6 bits (96), Expect = 0.004
Identities = 137/584 (23%), Positives = 188/584 (32%), Gaps = 77/584 (13%)
Query: 359 ATSPLTAPPQSISTGE-------DARKGRKGLAVSISVTDRAS-EIRCCTCLPKGLAVSI 410
ATS S STG D G A + VTD +S I T LP SI
Sbjct: 2830 ATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTSSASIGHATSLPVTDTSSI 2889
Query: 411 GVTDRASEIHCRT--CLLKGLAVSIGVPDRASETRCR---------TCLPKGLAVSIGVT 459
T A+ +H + G A + V D +S + + G A + VT
Sbjct: 2890 S-TGHATPLHVTSPSSASTGHATPLPVTDTSSASTGHANPLHVTSPSSASTGHATPLPVT 2948
Query: 460 DRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTCLPEGLAVSIGVTDRAPEIIRCRTC 519
D + T LP S+ D P + + G + VTD + T
Sbjct: 2949 DTSSASTGHATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGQATA 3008
Query: 520 LPKGLAVSIGVTDRAP-EIIRCLCCRTCLQKGLAV----SIGVTDRVPEIIRCRTCLPKG 574
LP S D P + T L V S+ D P + + G
Sbjct: 3009 LPVTSTSSASTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTG 3068
Query: 575 LAVSIGVTDRAPEIIRCRTCFPKGLAVSIGVTDRAPEIIRCLCCRTCLQKGLAVSIGVTD 634
A + VTD + T P S+ D P + + G A S+ VTD
Sbjct: 3069 HATPLLVTDASSASTGQATPLPVTSLSSVSTGDTTPLPV---TSPSSASTGHATSLPVTD 3125
Query: 635 RAPEMIRCRTCLPKGLAVSIGVTDRAPEIVCCRTCLQKGLAVSIGVTDRAPEMIRCRTCL 694
+ T LP VTD + T L S D P ++ + +
Sbjct: 3126 TSSASTGDTTSLP--------VTDTSSAYTGDTTSLPVTDTSSSSTGDTTPLLVTETSSV 3177
Query: 695 PKGLAVSVGVTDGASEIRCRTCLLEGLAVSVGITDRASEIIRCRTCLPKGLAVSVSVTDG 754
G A + VTD +S G A + +T +S G V VTD
Sbjct: 3178 STGHATPLLVTDASS-------ASTGHATPLHVTSPSS--------ASTGDTTPVPVTDT 3222
Query: 755 ASEIRCRTCLLEGLAVSVGITDRASEIIRCCTCLPKGLAVSVGITDRASEIIRCRTCLPK 814
+S + G A + +T +S T LP +TD +S T LP
Sbjct: 3223 SS-------VSTGHATPLPVTGLSSASTGDTTRLP--------VTDISSASTGQATPLPV 3267
Query: 815 GLAVSIGVTDRAS-EIRCHTCLPKGLAVSLSVTDRASEICCRTCLPKGLAVSIGVTDRAS 873
S+ D + + G A L VT +S V + T AS
Sbjct: 3268 TNTSSVSTGDTMPLPVTSPSSASTGHATPLPVTSTSS-----ASTGHATPVPVTSTSSAS 3322
Query: 874 EIHCPQLPCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPL 917
H LP S S PL P+T PS +S PL
Sbjct: 3323 TGHTTPLPVT----DTSSASTGDTTPL-PVTSPSSASTGHTTPL 3361
Score = 30.4 bits (67), Expect = 8.7
Identities = 60/224 (26%), Positives = 80/224 (35%), Gaps = 36/224 (16%)
Query: 720 GLAVSVGITDRASEIIRCRTCLPKGLAVSVS--------VTDGASE---------IRCRT 762
G + +TD +S T LP SVS VTD +SE + +
Sbjct: 988 GHTTPLHVTDASSVSTGHATPLPVTSPSSVSTGHTTPLPVTDTSSESTGHVTPLPVTSFS 1047
Query: 763 CLLEGLAVSVGITDRASEIIRCCTCLPKGLAVSVGITDRASEIIRCRTCLPKGLAVSIGV 822
G + + +TD +S T LP S D + + G A S+ V
Sbjct: 1048 SASTGDSTPLPVTDTSSASTGHVTPLPVTSLSSASTGDTTPLPVTDTSSASTGHATSLPV 1107
Query: 823 TDRASEIRCHTC-LP--------KGLAVSLSVTDRASEICCRTCLPKGLAVSIGVTDRAS 873
TD +S HT LP G A SL VTD +S + G + VTD +S
Sbjct: 1108 TDTSSVSTGHTTPLPVTDTSSASTGHATSLPVTDTSS-------VSTGHTTPLHVTDASS 1160
Query: 874 EIHCPQLPCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPL 917
P S S PL P+T PS +S PL
Sbjct: 1161 ASTGQATPL--PVTSLSSVSTGDTTPL-PVTSPSSASTGHATPL 1201
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 40.0 bits (92), Expect = 0.011
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 910 SPFPPPPLG------FREGAAGDWRPFPRPTAPRPVAPL-QRVGGDPAGGGADPQAEGDA 962
SP+ P LG F GA GD P+P P P P+A L + + G +GGG A G +
Sbjct: 73 SPYERPALGGYSDASFLNGAKGDPEPWPGPEPPYPLASLHEGLPGTKSGGGGGSGALGGS 132
Query: 963 DAVAG 967
+AG
Sbjct: 133 PVLAG 137
>gi|225690497 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 38.5 bits (88), Expect = 0.032
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 891 HFSLQSNVPLDPITEPSPSSPFPPP-----PLGFREGAAGD---------WRPFPRPTAP 936
H + VP DP + P+P SP P P LG G+ + P+P P+ P
Sbjct: 253 HVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPP 312
Query: 937 RPVAPLQRV 945
P+ P +RV
Sbjct: 313 HPLYPGRRV 321
>gi|225690495 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 38.5 bits (88), Expect = 0.032
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 891 HFSLQSNVPLDPITEPSPSSPFPPP-----PLGFREGAAGD---------WRPFPRPTAP 936
H + VP DP + P+P SP P P LG G+ + P+P P+ P
Sbjct: 253 HVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPP 312
Query: 937 RPVAPLQRV 945
P+ P +RV
Sbjct: 313 HPLYPGRRV 321
>gi|225690493 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 38.5 bits (88), Expect = 0.032
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 891 HFSLQSNVPLDPITEPSPSSPFPPP-----PLGFREGAAGD---------WRPFPRPTAP 936
H + VP DP + P+P SP P P LG G+ + P+P P+ P
Sbjct: 253 HVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPP 312
Query: 937 RPVAPLQRV 945
P+ P +RV
Sbjct: 313 HPLYPGRRV 321
>gi|225690491 tight junction associated protein 1 isoform b [Homo
sapiens]
Length = 547
Score = 38.5 bits (88), Expect = 0.032
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 891 HFSLQSNVPLDPITEPSPSSPFPPP-----PLGFREGAAGD---------WRPFPRPTAP 936
H + VP DP + P+P SP P P LG G+ + P+P P+ P
Sbjct: 253 HVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPP 312
Query: 937 RPVAPLQRV 945
P+ P +RV
Sbjct: 313 HPLYPGRRV 321
>gi|225690489 tight junction associated protein 1 isoform a [Homo
sapiens]
Length = 557
Score = 38.5 bits (88), Expect = 0.032
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 891 HFSLQSNVPLDPITEPSPSSPFPPP-----PLGFREGAAGD---------WRPFPRPTAP 936
H + VP DP + P+P SP P P LG G+ + P+P P+ P
Sbjct: 263 HVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPP 322
Query: 937 RPVAPLQRV 945
P+ P +RV
Sbjct: 323 HPLYPGRRV 331
>gi|225690487 tight junction associated protein 1 isoform a [Homo
sapiens]
Length = 557
Score = 38.5 bits (88), Expect = 0.032
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 891 HFSLQSNVPLDPITEPSPSSPFPPP-----PLGFREGAAGD---------WRPFPRPTAP 936
H + VP DP + P+P SP P P LG G+ + P+P P+ P
Sbjct: 263 HVDMSEGVPGDPASPPAPGSPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPP 322
Query: 937 RPVAPLQRV 945
P+ P +RV
Sbjct: 323 HPLYPGRRV 331
>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
sapiens]
Length = 468
Score = 38.1 bits (87), Expect = 0.042
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 876 HCPQLPCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTA 935
H P+LP A RR +P P+ E SP P P G R+G+ D RP P P
Sbjct: 199 HRPRLPSAESLSRRP-------LPALPVPEAPSPSPVPSPAPG-RKGSIQD-RPLPPPPP 249
Query: 936 PRPVAPLQRVGGDPAGGGADPQAEGDADAVAGEAAVQESLVLMLK 980
P +V GDP G + G + G +E + LK
Sbjct: 250 RLPGYGGPKVEGDPEGREMEDDPAGHHNEYEGIPMAEEYDYVHLK 294
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 38.1 bits (87), Expect = 0.042
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 876 HCPQLPCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTA 935
H P+LP A RR +P P+ E SP P P G R+G+ D RP P P
Sbjct: 292 HRPRLPSAESLSRRP-------LPALPVPEAPSPSPVPSPAPG-RKGSIQD-RPLPPPPP 342
Query: 936 PRPVAPLQRVGGDPAGGGADPQAEGDADAVAGEAAVQESLVLMLK 980
P +V GDP G + G + G +E + LK
Sbjct: 343 RLPGYGGPKVEGDPEGREMEDDPAGHHNEYEGIPMAEEYDYVHLK 387
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 37.7 bits (86), Expect = 0.054
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 878 PQLPCAWDPERRSHFSLQSNVP---------LDPITEPSPSSPFPPPPLGFREGAAGDWR 928
P LP P SLQ + P L P + P P+ P P P G +
Sbjct: 679 PGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPT 738
Query: 929 PFPRPTAPRPVAPLQRV 945
P P+ AP+PV PLQ V
Sbjct: 739 PLPQVLAPQPVVPLQPV 755
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 37.4 bits (85), Expect = 0.071
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 11/73 (15%)
Query: 886 PERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRV 945
P R S + + P P SP PPPP P P P P P AP
Sbjct: 69 PGRVSRLLERFDPPAAPRRRGSPERARPPPP-----------PPPPAPPRPPPAAPSPPA 117
Query: 946 GGDPAGGGADPQA 958
P GGGA P A
Sbjct: 118 APGPRGGGASPGA 130
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 37.4 bits (85), Expect = 0.071
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 11/73 (15%)
Query: 886 PERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRV 945
P R S + + P P SP PPPP P P P P P AP
Sbjct: 69 PGRVSRLLERFDPPAAPRRRGSPERARPPPP-----------PPPPAPPRPPPAAPSPPA 117
Query: 946 GGDPAGGGADPQA 958
P GGGA P A
Sbjct: 118 APGPRGGGASPGA 130
>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
Length = 214
Score = 37.0 bits (84), Expect = 0.093
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 900 LDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAG 951
++P EP PS PPPPL R P P P APRP +P + P G
Sbjct: 1 MEPAREP-PSRARPPPPLAAR--------PAPAPAAPRPRSPAEAEARGPEG 43
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 36.2 bits (82), Expect = 0.16
Identities = 43/152 (28%), Positives = 57/152 (37%), Gaps = 16/152 (10%)
Query: 783 RCCTCLPKGLAVSVGITDRASEIIRCRTCLP-----KGLAVSIGVTDRASEIRCHTCLPK 837
R CTC P G S+ CR C P G V+ T+ S++ C C P
Sbjct: 116 RICTCRP-------GWYCALSKQEGCRLCAPLRKCRPGFGVARPGTE-TSDVVCKPCAPG 167
Query: 838 GLAVSLSVTD--RASEICCRTCLPKGLAVSIGVTDRASEIHCPQLPCAWDPERRSHFSLQ 895
+ + S TD R +IC +P G A V S P+ S S
Sbjct: 168 TFSNTTSSTDICRPHQICNVVAIP-GNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQH 226
Query: 896 SNVPLDPITEPSPSSPFPPPPLGFREGAAGDW 927
+ +P T PS S P P EG+ GD+
Sbjct: 227 TQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDF 258
>gi|195947369 junction-mediating and regulatory protein [Homo sapiens]
Length = 988
Score = 35.8 bits (81), Expect = 0.21
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 897 NVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADP 956
+V ++P+ P P +P PPPP P P P P P+ + G P
Sbjct: 797 SVTINPLPSPLPPTPPPPPP--------------PPPPPPPPPLPVAKDSGPETLEKDLP 842
Query: 957 QAEGDADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQ 1000
+ EG+ + ++A S L S +S+R+++ LQR+
Sbjct: 843 RKEGNEKRIP-KSASAPSAHLFDSSQLVSARKKLRKTAEGLQRR 885
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 35.4 bits (80), Expect = 0.27
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 901 DPITEPSPS-SPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQAE 959
DP + P +P P P G G G P P A P P GG+P GGA A
Sbjct: 191 DPDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGP----GGEPGKGGAAAAAA 246
Query: 960 GDADAVAGEAA 970
A A A AA
Sbjct: 247 AAAAAAAAAAA 257
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 35.4 bits (80), Expect = 0.27
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 21/81 (25%)
Query: 901 DPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQAEG 960
+P +P P +P PPPP +P P+P P P G P GGA G
Sbjct: 4 NPQPQPPPPAPPPPPP-----------QPQPQPPPPPP-----GPGAGPGAGGA-----G 42
Query: 961 DADAVAGEAAVQESLVLMLKS 981
A A AG+ + +V LKS
Sbjct: 43 GAGAGAGDPQLVAMIVNHLKS 63
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 35.0 bits (79), Expect = 0.35
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 913 PPPPLGFREGAAGDWRPFPRPTAPRPVAP-LQRVGGDPAGGGADPQAEGDADAVAGEAAV 971
P PP G G A R FP+P RP P GG+ GGG + G A V+G +
Sbjct: 562 PAPPEGTAPGPA---RAFPQPDPQRPQMPGHSGPGGEGGGGGGEGWGAGRAAPVSGSVTI 618
>gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens]
Length = 1158
Score = 34.7 bits (78), Expect = 0.46
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 896 SNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAP 936
+++PL +PSP++P PPPP R A + P PRP P
Sbjct: 1091 NSLPLSHQLDPSPATPPPPPPTSLR--LATVYTPPPRPPPP 1129
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 34.7 bits (78), Expect = 0.46
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 908 PSSPFPPPPLGFREGAAGDWRPFPRPTAPRP 938
P P PPPP+ G GDW+P P P P P
Sbjct: 82 PPPPLPPPPV-MPGGGYGDWQPPPPPMPPPP 111
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 34.3 bits (77), Expect = 0.60
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 899 PLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQA 958
P P ++P PPP R G G RP P P P PL G P P
Sbjct: 75 PAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGP----PSPRRPLVPAGPAPPAAKLRPPP 130
Query: 959 EGDADAVA 966
EG A + A
Sbjct: 131 EGSAGSCA 138
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 34.3 bits (77), Expect = 0.60
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 878 PQLPCAWD-PERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAP 936
P LP + D PE + + +P P P P P PPPP G A + P P P
Sbjct: 531 PPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPP 590
Query: 937 RPVAP 941
P AP
Sbjct: 591 LPSAP 595
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 34.3 bits (77), Expect = 0.60
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 903 ITEPSPSSPFPPPPLGFREGAAGDWRPF-----PRPTAPR-PVAPLQRVGGDPAGGGADP 956
+ EP P P PPPP G G P P TAP P PL++ + GG P
Sbjct: 1342 VAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYRENVGGPGAP 1401
Query: 957 QAEGDADAVAGEAA 970
+ A G A
Sbjct: 1402 EGTPAGRARGGSPA 1415
Score = 31.2 bits (69), Expect = 5.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 906 PSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAG 951
P P++P PPPP F+ P P P+P A L+R P+G
Sbjct: 930 PEPAAPPPPPPRTFQMVTT------PFPALPQPKALLERFHQVPSG 969
>gi|21361825 G protein-coupled receptor 137 [Homo sapiens]
Length = 417
Score = 33.9 bits (76), Expect = 0.79
Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 13/86 (15%)
Query: 870 DRASEIHCPQLPCAWDPERRSHFSLQSNVPLDPITEPSPSSPFPPPPLGFREGAAGDWRP 929
DRA HC C+W+ R Q ++ P PP P + P
Sbjct: 323 DRAG--HCEDEGCSWEHSRGESTRCQDQAATTTVSTPPHRRDPPPSPTEY---------P 371
Query: 930 FPRPTAPRPVAP--LQRVGGDPAGGG 953
P P PRP+ L + DP G G
Sbjct: 372 GPSPPHPRPLCQVCLPLLAQDPGGRG 397
>gi|239747120 PREDICTED: hypothetical protein XP_002343918 [Homo
sapiens]
Length = 139
Score = 33.5 bits (75), Expect = 1.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 299 WTRAPKDKAPSSGGFYNLHRAEPVQVW--YKHRPVNQR---WHQR 338
WT+AP+D APS G + R +P+ W P + R WHQR
Sbjct: 49 WTKAPEDPAPSGPGLWQ-QRTQPLASWTMAPEDPASLRHGLWHQR 92
>gi|239747111 PREDICTED: hypothetical protein XP_002343913 [Homo
sapiens]
Length = 139
Score = 33.5 bits (75), Expect = 1.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 299 WTRAPKDKAPSSGGFYNLHRAEPVQVW--YKHRPVNQR---WHQR 338
WT+AP+D APS G + R +P+ W P + R WHQR
Sbjct: 49 WTKAPEDPAPSGPGLWQ-QRTQPLASWTMAPEDPASLRHGLWHQR 92
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 33.5 bits (75), Expect = 1.0
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 14/99 (14%)
Query: 902 PITEPSPSSPFPPPPLGFREGAAGDWRPFPRPTAPRPVAPLQRVGGDPAGGGADPQAEGD 961
P TEP P +P PP P R G AG+W P P R GG P P A D
Sbjct: 399 PETEPGPPAPKPPLPPPHR-GPAGNWGP-PGDYPDR--------GGPP----CKPPAPED 444
Query: 962 ADAVAGEAAVQESLVLMLKSYRISSRRRMAVQQLTLQRQ 1000
D + Q S + L R RR +++ +R+
Sbjct: 445 EDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERR 483
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,818,332
Number of Sequences: 37866
Number of extensions: 2414670
Number of successful extensions: 10036
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 9020
Number of HSP's gapped (non-prelim): 554
length of query: 1002
length of database: 18,247,518
effective HSP length: 112
effective length of query: 890
effective length of database: 14,006,526
effective search space: 12465808140
effective search space used: 12465808140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.