Search of human proteins with 169164621

Search of human proteins with 169164621

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169164621 PREDICTED: hypothetical protein [Homo sapiens]
         (163 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169163848 PREDICTED: hypothetical protein [Homo sapiens]           347   3e-96
gi|169164621 PREDICTED: hypothetical protein [Homo sapiens]           347   3e-96
gi|169163099 PREDICTED: hypothetical protein [Homo sapiens]           347   3e-96
gi|6912752 zinc finger protein 281 [Homo sapiens]                      39   0.002
gi|239757070 PREDICTED: hypothetical protein [Homo sapiens]            34   0.049
gi|239751580 PREDICTED: hypothetical protein [Homo sapiens]            34   0.049
gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo ...    34   0.049
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]            34   0.064
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]            34   0.064
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]            34   0.064
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo...    32   0.19 
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]            32   0.24 
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]            32   0.24 
gi|169204353 PREDICTED: hypothetical protein [Homo sapiens]            32   0.24 
gi|52138513 SIN3 homolog B, transcription regulator [Homo sapiens]     32   0.32 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            31   0.41 
gi|109255251 loricrin [Homo sapiens]                                   31   0.41 
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]          31   0.54 
gi|61676082 shadow of prion protein [Homo sapiens]                     31   0.54 
gi|31542255 hypothetical protein LOC140706 [Homo sapiens]              31   0.54 
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ...    30   0.71 
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]            30   0.71 
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ...    30   0.71 
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ...    30   0.71 
gi|188595687 gamma filamin isoform b [Homo sapiens]                    30   0.92 
gi|116805322 gamma filamin isoform a [Homo sapiens]                    30   0.92 
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ...    30   0.92 
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ...    30   0.92 
gi|21687188 hypothetical protein LOC146325 [Homo sapiens]              30   0.92 
gi|7661690 coiled-coil domain containing 9 [Homo sapiens]              30   0.92 

>gi|169163848 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  347 bits (890), Expect = 3e-96
 Identities = 163/163 (100%), Positives = 163/163 (100%)

Query: 1   MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60
           MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE
Sbjct: 1   MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60

Query: 61  GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC 120
           GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC
Sbjct: 61  GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC 120

Query: 121 GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC 163
           GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC
Sbjct: 121 GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC 163


>gi|169164621 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  347 bits (890), Expect = 3e-96
 Identities = 163/163 (100%), Positives = 163/163 (100%)

Query: 1   MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60
           MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE
Sbjct: 1   MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60

Query: 61  GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC 120
           GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC
Sbjct: 61  GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC 120

Query: 121 GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC 163
           GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC
Sbjct: 121 GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC 163


>gi|169163099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 163

 Score =  347 bits (890), Expect = 3e-96
 Identities = 163/163 (100%), Positives = 163/163 (100%)

Query: 1   MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60
           MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE
Sbjct: 1   MLHAGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60

Query: 61  GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC 120
           GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC
Sbjct: 61  GGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIKC 120

Query: 121 GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC 163
           GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC
Sbjct: 121 GFKCCPEEAGFLSVCGMEGPCRGTKRHPENSEDPEAPLKQIPC 163


>gi|6912752 zinc finger protein 281 [Homo sapiens]
          Length = 895

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 40  GPGGRGLAGGKGKLKRGWEREGGSGRTGRRVHFH---KKAEIAVGSRISRPCSPSPIPGF 96
           G GG G +GG G    G    GG G +GRR        +  +    R+       P+  F
Sbjct: 10  GGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQGMVMFNHRL------PPVTSF 63

Query: 97  LQEAGSRAQSPKCVLWS 113
            + AGS A  P+CVL S
Sbjct: 64  TRPAGSAAPPPQCVLSS 80


>gi|239757070 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 34.3 bits (77), Expect = 0.049
 Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 16/113 (14%)

Query: 4   AGRRGGGEPAA--WVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREG 61
           +GR G     A  W +AR E+RA        L   G R   GRG  G + +  R   R G
Sbjct: 58  SGRAGAAGQGAQGWAAARRESRAAG----GRLECLGLRAGAGRG-GGEEEEPARAPPRRG 112

Query: 62  GS--GRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLW 112
           G+  GR GR  H H+       +R+S      P+P         A+SP+ + W
Sbjct: 113 GASRGRVGRHRHRHRH---HCQNRLSGVAGCLPLP----RPRDGARSPQPLPW 158


>gi|239751580 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 34.3 bits (77), Expect = 0.049
 Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 16/113 (14%)

Query: 4   AGRRGGGEPAA--WVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREG 61
           +GR G     A  W +AR E+RA        L   G R   GRG  G + +  R   R G
Sbjct: 58  SGRAGAAGQGAQGWAAARRESRAAG----GRLECLGLRAGAGRG-GGEEEEPARAPPRRG 112

Query: 62  GS--GRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLW 112
           G+  GR GR  H H+       +R+S      P+P         A+SP+ + W
Sbjct: 113 GASRGRVGRHRHRHRH---HCQNRLSGVAGCLPLP----RPRDGARSPQPLPW 158


>gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo
           sapiens]
          Length = 195

 Score = 34.3 bits (77), Expect = 0.049
 Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 16/113 (14%)

Query: 4   AGRRGGGEPAA--WVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREG 61
           +GR G     A  W +AR E+RA        L   G R   GRG  G + +  R   R G
Sbjct: 58  SGRAGAAGQGAQGWAAARRESRAAG----GRLECLGLRAGAGRG-GGEEEEPARAPPRRG 112

Query: 62  GS--GRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLW 112
           G+  GR GR  H H+       +R+S      P+P         A+SP+ + W
Sbjct: 113 GASRGRVGRHRHRHRH---HCQNRLSGVAGCLPLP----RPRDGARSPQPLPW 158


>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 33.9 bits (76), Expect = 0.064
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 19/112 (16%)

Query: 5   GRRGGGEPAAWVSARAETRAQ-----SECVPTSLAAAGTRGPGGRGLAGG--------KG 51
           GRRG  E       RA+T A+     + C        G +  GG G AG         +G
Sbjct: 2   GRRGFAE-----LGRAQTTARGRYNRNRCTLRITQRWGRQAWGGGGEAGAHQRICGTRRG 56

Query: 52  KLKRGWEREGGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSR 103
           +  +   R+G +GR G           A G+ + R  SP P+PG     G+R
Sbjct: 57  ETHKSRSRDGSTGRGGPNARSPHPLGPA-GAGVPRSLSPRPVPGSEPSTGTR 107



 Score = 31.2 bits (69), Expect = 0.41
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 36/144 (25%)

Query: 5   GRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGSG 64
           G+ G G    W  A   T ++  C PT   A G+R P  RG  G        W  EGG G
Sbjct: 157 GQEGAG--TGWGDA---TLSRRNCTPTPPYAGGSREP-ARGKEG-------VWTPEGGDG 203

Query: 65  -----RTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIK 119
                R  R     ++   + G+ +    + + +PGFL +    + +P  V W       
Sbjct: 204 DPEGNRRLRPPPLSRRCFRSGGAAVF--TTTARLPGFLPDCWGVSLAPHHVRW------- 254

Query: 120 CGFKCCPEEAGFLSVCGMEGPCRG 143
                C E    + VC  EGP  G
Sbjct: 255 -----CAE----VRVCAGEGPLLG 269


>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 33.9 bits (76), Expect = 0.064
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 19/112 (16%)

Query: 5   GRRGGGEPAAWVSARAETRAQ-----SECVPTSLAAAGTRGPGGRGLAGG--------KG 51
           GRRG  E       RA+T A+     + C        G +  GG G AG         +G
Sbjct: 2   GRRGFAE-----LGRAQTTARGRYNRNRCTLRITQRWGRQAWGGGGEAGAHQRICGTRRG 56

Query: 52  KLKRGWEREGGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSR 103
           +  +   R+G +GR G           A G+ + R  SP P+PG     G+R
Sbjct: 57  ETHKSRSRDGSTGRGGPNARSPHPLGPA-GAGVPRSLSPRPVPGSEPSTGTR 107



 Score = 31.2 bits (69), Expect = 0.41
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 36/144 (25%)

Query: 5   GRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGSG 64
           G+ G G    W  A   T ++  C PT   A G+R P  RG  G        W  EGG G
Sbjct: 157 GQEGAG--TGWGDA---TLSRRNCTPTPPYAGGSREP-ARGKEG-------VWTPEGGDG 203

Query: 65  -----RTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIK 119
                R  R     ++   + G+ +    + + +PGFL +    + +P  V W       
Sbjct: 204 DPEGNRRLRPPPLSRRCFRSGGAAVF--TTTARLPGFLPDCWGVSLAPHHVRW------- 254

Query: 120 CGFKCCPEEAGFLSVCGMEGPCRG 143
                C E    + VC  EGP  G
Sbjct: 255 -----CAE----VRVCAGEGPLLG 269


>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 33.9 bits (76), Expect = 0.064
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 19/112 (16%)

Query: 5   GRRGGGEPAAWVSARAETRAQ-----SECVPTSLAAAGTRGPGGRGLAGG--------KG 51
           GRRG  E       RA+T A+     + C        G +  GG G AG         +G
Sbjct: 2   GRRGFAE-----LGRAQTTARGRYNRNRCTLRITQRWGRQAWGGGGEAGAHQRICGTRRG 56

Query: 52  KLKRGWEREGGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSR 103
           +  +   R+G +GR G           A G+ + R  SP P+PG     G+R
Sbjct: 57  ETHKSRSRDGSTGRGGPNARSPHPLGPA-GAGVPRSLSPRPVPGSEPSTGTR 107



 Score = 31.2 bits (69), Expect = 0.41
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 36/144 (25%)

Query: 5   GRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGSG 64
           G+ G G    W  A   T ++  C PT   A G+R P  RG  G        W  EGG G
Sbjct: 157 GQEGAG--TGWGDA---TLSRRNCTPTPPYAGGSREP-ARGKEG-------VWTPEGGDG 203

Query: 65  -----RTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCVLWSLMMLIK 119
                R  R     ++   + G+ +    + + +PGFL +    + +P  V W       
Sbjct: 204 DPEGNRRLRPPPLSRRCFRSGGAAVF--TTTARLPGFLPDCWGVSLAPHHVRW------- 254

Query: 120 CGFKCCPEEAGFLSVCGMEGPCRG 143
                C E    + VC  EGP  G
Sbjct: 255 -----CAE----VRVCAGEGPLLG 269


>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
            sapiens]
          Length = 1802

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 16/31 (51%), Positives = 17/31 (54%)

Query: 38   TRGPGGRGLAGGKGKLKRGWEREGGSGRTGR 68
            TRG GGRG  G  G+  RG    GG GR  R
Sbjct: 1667 TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSR 1697


>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 19/119 (15%)

Query: 12  PAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLK--RGWEREGGSGRTGRR 69
           P AW   R+ T   +   P   A  G R      +A   G L+  R W R   +   G  
Sbjct: 488 PGAWRGYRSTTG--TAIAPNLGALGGNRSAARTDIAPTPGALRGYRSWTRRAIAPTPGTL 545

Query: 70  VHFHKKAEIAV--------GSRISRPCSPSPIPGFLQEAGSRAQ-------SPKCVLWS 113
             +  ++   +        G +     S +P PG L+  GSRA+        P C +WS
Sbjct: 546 SSYRSRSRRTIASTPATLRGEKSRAHTSLAPTPGALRGDGSRARRAIVPTTCPLCEIWS 604


>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 19/119 (15%)

Query: 12  PAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLK--RGWEREGGSGRTGRR 69
           P AW   R+ T   +   P   A  G R      +A   G L+  R W R   +   G  
Sbjct: 488 PGAWRGYRSTTG--TAIAPNLGALGGNRSAARTDIAPTPGALRGYRSWTRRAIAPTPGTL 545

Query: 70  VHFHKKAEIAV--------GSRISRPCSPSPIPGFLQEAGSRAQ-------SPKCVLWS 113
             +  ++   +        G +     S +P PG L+  GSRA+        P C +WS
Sbjct: 546 SSYRSRSRRTIASTPATLRGEKSRAHTSLAPTPGALRGDGSRARRAIVPTTCPLCEIWS 604


>gi|169204353 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 214

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 12/105 (11%)

Query: 29  VPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGG---SGRTGRRVHFHKKAEIAVGSRIS 85
           +P+  A  G      R   GG  +  RGW R G      R G     H + +       S
Sbjct: 42  LPSDDAQPGKALRPQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQAC-----S 96

Query: 86  RPCSPSPIPGFLQEAGSRAQSPKCVLW--SLMMLIKCGFKC--CP 126
           RPCSPSP     +         +C  W    M+ + C   C  CP
Sbjct: 97  RPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCP 141


>gi|52138513 SIN3 homolog B, transcription regulator [Homo
          sapiens]
          Length = 1162

 Score = 31.6 bits (70), Expect = 0.32
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 36 AGTRGPGGRGLAGGKGKLKRGWEREGGSGRTGRRVHFHKKAEIAVGSRISRPCSPSPIPG 95
          +G  GP GRGL+G +      W R G +G     VH           +I     P+   G
Sbjct: 11 SGAGGPAGRGLSGAR------WGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNG 64

Query: 96 FLQ 98
          FL+
Sbjct: 65 FLE 67


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 27/111 (24%)

Query: 4   AGRRGGGEP--AAWVSARAETRAQSECVPTSLAAAGTR--GPGGRGL------AGGKGKL 53
           AGR G G P  AA      E  A+S     S AAAG +  G G + L      AGGK   
Sbjct: 13  AGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKAR 72

Query: 54  KRG-------------WEREGGSGRTGRRVHFHKKAEIA----VGSRISRP 87
            RG             W++  G+G    R    +KA  A    +G R  +P
Sbjct: 73  LRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKP 123



 Score = 30.4 bits (67), Expect = 0.71
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 4   AGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGS 63
           AG +  G  A   +A A  ++Q    P   AAAG +         GK   +RG +  G  
Sbjct: 148 AGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKS------RSGKKPRRRGAKSRGDE 201

Query: 64  GRTGRRVHFHKKAEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPK 108
            + GR+     +     G R  +   P P  G  +      + P+
Sbjct: 202 DKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQ 246


>gi|109255251 loricrin [Homo sapiens]
          Length = 312

 Score = 31.2 bits (69), Expect = 0.41
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 5   GRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGSG 64
           G   GG  + +VS++  T  Q+ C P      G+ G GG   +GG G    G    GG G
Sbjct: 198 GGSSGGSGSGYVSSQQVT--QTSCAPQPSYGGGSSGGGG---SGGSGCFSSG----GGGG 248

Query: 65  RTG 67
            +G
Sbjct: 249 SSG 251


>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
          Length = 331

 Score = 30.8 bits (68), Expect = 0.54
 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 7   RGGGEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGSGRT 66
           RG  EP     A  + R+     P   AA G  G GG G  GG G    G    GG+G  
Sbjct: 35  RGAKEPTGCTEAGRDDRSS----PAVRAAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGG 90

Query: 67  GRRVHFHKKAEIAVGSRISRPCSP 90
              V   ++ ++    R   P SP
Sbjct: 91  RSPV---RELDMGAAERSREPGSP 111


>gi|61676082 shadow of prion protein [Homo sapiens]
          Length = 151

 Score = 30.8 bits (68), Expect = 0.54
 Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 9/67 (13%)

Query: 5  GRRGGGEPAAWVSARAETR----AQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWERE 60
          G RGG   A+ V  R   R      S  V  + AAAG       GLA G      GW R 
Sbjct: 38 GVRGGARGASRVRVRPAQRYGAPGSSLRVAAAGAAAGAAAGAAAGLAAGS-----GWRRA 92

Query: 61 GGSGRTG 67
           G G  G
Sbjct: 93 AGPGERG 99


>gi|31542255 hypothetical protein LOC140706 [Homo sapiens]
          Length = 433

 Score = 30.8 bits (68), Expect = 0.54
 Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 8/89 (8%)

Query: 6   RRGGGEPAAWVSARAETRAQSECVPT-SLAAAGTRGPGGRGLAGGKGKLKRGWE-REGGS 63
           R GGG   +    RA  RA        + + +  R  GG G  GG GK    WE R+ GS
Sbjct: 215 RAGGGGGGSLERQRAGARASGSWERRQTFSGSWERRHGGGGGGGGAGKPGGSWERRQAGS 274

Query: 64  GRTGRRVHFHKKAEIAVGSRISRPCSPSP 92
           G  G     H       G     P  PSP
Sbjct: 275 GGGGSWERRHP------GPNPLDPQDPSP 297


>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
           sapiens]
          Length = 252

 Score = 30.4 bits (67), Expect = 0.71
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 4   AGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRG-PGGRGLAGGKGKLK 54
           AG+RG G  A  +  R +  A+    P   +    +G  G RGL GG+G L+
Sbjct: 177 AGQRGLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLR 228


>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 650

 Score = 30.4 bits (67), Expect = 0.71
 Identities = 36/149 (24%), Positives = 49/149 (32%), Gaps = 30/149 (20%)

Query: 4   AGRRGGGEPAAWVSARAETRAQSEC-VPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGG 62
           AG  GGGE AA  ++    R+     + +    + TR   G     G    +R W R GG
Sbjct: 155 AGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGG 214

Query: 63  SGRTGRRVHFHKK------------AEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCV 110
               G+R    KK            A  A  +   RP +PS +         R ++P   
Sbjct: 215 LRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAP--- 271

Query: 111 LWSLMMLIKCGFKCCPEEAGFLSVCGMEG 139
                         CP  AG     G  G
Sbjct: 272 --------------CPHRAGGADGVGSHG 286


>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
           sapiens]
          Length = 725

 Score = 30.4 bits (67), Expect = 0.71
 Identities = 36/149 (24%), Positives = 49/149 (32%), Gaps = 30/149 (20%)

Query: 4   AGRRGGGEPAAWVSARAETRAQSEC-VPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGG 62
           AG  GGGE AA  ++    R+     + +    + TR   G     G    +R W R GG
Sbjct: 155 AGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGG 214

Query: 63  SGRTGRRVHFHKK------------AEIAVGSRISRPCSPSPIPGFLQEAGSRAQSPKCV 110
               G+R    KK            A  A  +   RP +PS +         R ++P   
Sbjct: 215 LRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAP--- 271

Query: 111 LWSLMMLIKCGFKCCPEEAGFLSVCGMEG 139
                         CP  AG     G  G
Sbjct: 272 --------------CPHRAGGADGVGSHG 286



 Score = 26.9 bits (58), Expect = 7.8
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 10  GEPAAWVSARAETRAQSECVPTSLAAAGTRGPGGRG--LAGGK-GKLKRGWEREGGSGRT 66
           G PA  +S  A     +  VP SLA A +    G G   AGG+  +  RG +R G  GR 
Sbjct: 657 GPPA--LSNTAVQTGPAGVVPHSLATAPSSSSMGEGPGAAGGRFTQAARGMQRAGPGGRD 714

Query: 67  G 67
           G
Sbjct: 715 G 715


>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
           sapiens]
          Length = 252

 Score = 30.4 bits (67), Expect = 0.71
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 4   AGRRGGGEPAAWVSARAETRAQSECVPTSLAAAGTRG-PGGRGLAGGKGKLK 54
           AG+RG G  A  +  R +  A+    P   +    +G  G RGL GG+G L+
Sbjct: 177 AGQRGLGSGALGLGRREKLAARPAATPRRASRPPWQGCRGARGLGGGRGPLR 228


>gi|188595687 gamma filamin isoform b [Homo sapiens]
          Length = 2692

 Score = 30.0 bits (66), Expect = 0.92
 Identities = 31/86 (36%), Positives = 35/86 (40%), Gaps = 19/86 (22%)

Query: 38   TRGPGGRG-----LAGGKGKLKRG----------WEREGGSGRTGRRVHFHKKAEIAVGS 82
            T GP G G      AGG G L+RG          W RE G+G     V    KAEIA   
Sbjct: 2272 TVGPLGEGGAHKVRAGGTG-LERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAFED 2330

Query: 83   RISRPCSPSPIPGFLQEAGSRAQSPK 108
            R    C  S +   +QE G    S K
Sbjct: 2331 RKDGSCGVSYV---VQEPGDYEVSIK 2353


>gi|116805322 gamma filamin isoform a [Homo sapiens]
          Length = 2725

 Score = 30.0 bits (66), Expect = 0.92
 Identities = 31/86 (36%), Positives = 35/86 (40%), Gaps = 19/86 (22%)

Query: 38   TRGPGGRG-----LAGGKGKLKRG----------WEREGGSGRTGRRVHFHKKAEIAVGS 82
            T GP G G      AGG G L+RG          W RE G+G     V    KAEIA   
Sbjct: 2305 TVGPLGEGGAHKVRAGGTG-LERGVAGVPAEFSIWTREAGAGGLSIAVEGPSKAEIAFED 2363

Query: 83   RISRPCSPSPIPGFLQEAGSRAQSPK 108
            R    C  S +   +QE G    S K
Sbjct: 2364 RKDGSCGVSYV---VQEPGDYEVSIK 2386


>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
           sapiens]
          Length = 264

 Score = 30.0 bits (66), Expect = 0.92
 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 23  RAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREG-GSGRTGRRVH-----FHKKA 76
           R  S C   SL+    R  GG G A GKG+    W R G G  R+G  +H         A
Sbjct: 3   RTSSGC--PSLSMQNIRSQGGPGQASGKGRCV--WRRAGAGIVRSGPGLHGALGPDTGGA 58

Query: 77  EIAVGSRISRPCSPS-PIPGFLQEAG 101
           ++ V  R + P  PS P+ G  +E G
Sbjct: 59  KLRVRPRRTPPRDPSLPVLGGAKEPG 84


>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
           sapiens]
          Length = 264

 Score = 30.0 bits (66), Expect = 0.92
 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 23  RAQSECVPTSLAAAGTRGPGGRGLAGGKGKLKRGWEREG-GSGRTGRRVH-----FHKKA 76
           R  S C   SL+    R  GG G A GKG+    W R G G  R+G  +H         A
Sbjct: 3   RTSSGC--PSLSMQNIRSQGGPGQASGKGRCV--WRRAGAGIVRSGPGLHGALGPDTGGA 58

Query: 77  EIAVGSRISRPCSPS-PIPGFLQEAG 101
           ++ V  R + P  PS P+ G  +E G
Sbjct: 59  KLRVRPRRTPPRDPSLPVLGGAKEPG 84


>gi|21687188 hypothetical protein LOC146325 [Homo sapiens]
          Length = 571

 Score = 30.0 bits (66), Expect = 0.92
 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 30  PTSLAAAGTRGPGGRGLAGGKGKLKRGWEREGGSGRTGRRVHFHKKAEIAVGSRISRPCS 89
           P  +A A  +GPG  GL      L   W+   G G   R V     A  + G   S PC 
Sbjct: 141 PPPVARATRKGPGPSGL------LPESWKP--GMGGDPRGVGAGDMA--SAGPEGSVPCY 190

Query: 90  PSPIPGFLQEAGS 102
           P P PG   EA S
Sbjct: 191 PPPAPGEFPEAHS 203


>gi|7661690 coiled-coil domain containing 9 [Homo sapiens]
          Length = 531

 Score = 30.0 bits (66), Expect = 0.92
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 34  AAAGTRGPGGRGLAGGKGKLKRGWE-------REGGSGRTGRR 69
           A+ G R P  +G   G G+  R WE       R GG+G  GRR
Sbjct: 89  ASKGGRTPPQQGGRAGMGRASRSWEGSPGEQPRGGGAGGRGRR 131


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,198,364
Number of Sequences: 37866
Number of extensions: 439908
Number of successful extensions: 2257
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 2154
Number of HSP's gapped (non-prelim): 219
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.