Guide to the Human Genome
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Name: LOC645314 Sequence: fasta or formatted (181aa) NCBI GI: 169164468
Description:

PREDICTED: similar to hCG1642995

Not currently referenced in the text

Other entries for this name:
alt prot {181aa} PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 17
alt prot {181aa} PREDICTED: similar to hCG1642995
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         13           2
 C cysteine            0.6          1           1
 D aspartate           3.3          6           1
 E glutamate          12.7         23           3
 F phenylalanine       1.1          2           1
 G glycine             3.9          7           1
 H histidine           2.8          5           1
 I isoleucine          4.4          8           1
 K lysine              5.5         10           2
 L leucine            10.5         19           2
 M methionine          2.2          4           1
 N asparagine          1.7          3           1
 P proline             3.9          7           1
 Q glutamine           7.7         14           2
 R arginine            6.6         12           1
 S serine              9.9         18           2
 T threonine           3.9          7           1
 V valine              7.2         13           2
 W tryptophan          2.8          5           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1642995 
LOC645314             0.994   PREDICTED: similar to hCG1642995 
LOC645314             0.994   PREDICTED: similar to DnaJ (Hsp40) homolog, subfami...
DNAJC17               0.469   DnaJ (Hsp40) homolog, subfamily C, member 17 
WDR87                 0.036   NYD-SP11 protein 
CEP164                0.036   centrosomal protein 164kDa 
TRIM8                 0.030   tripartite motif-containing 8 
CNTROB                0.027   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.027   centrobin, centrosomal BRCA2 interacting protein iso...
LAMA5                 0.024   laminin alpha 5 
DNAJC14               0.024   dopamine receptor interacting protein 
DNAJB4                0.024   DnaJ (Hsp40) homolog, subfamily B, member 4 
UPF3A                 0.021   UPF3 regulator of nonsense transcripts homolog A iso...
UPF3A                 0.021   UPF3 regulator of nonsense transcripts homolog A iso...
LOC283685             0.018   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.018   trichohyalin 
LRRCC1                0.018   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.018   sodium channel associated protein 2 isoform a [Homo...
GIGYF2                0.018   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.018   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.018   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.018   GRB10 interacting GYF protein 2 isoform b 
LOC283685             0.018   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EVPL                  0.018   envoplakin 
ESPN                  0.018   espin 
LRRIQ1                0.018   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.018   leucine-rich repeats and IQ motif containing 1 isof...
ME1                   0.015   cytosolic malic enzyme 1 
DSP                   0.015   desmoplakin isoform I 
CTTNBP2NL             0.015   CTTNBP2 N-terminal like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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