Guide to the Human Genome
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Name: ME1 Sequence: fasta or formatted (572aa) NCBI GI: 4505143
Description:

cytosolic malic enzyme 1

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         44           2
 C cysteine            1.7         10           1
 D aspartate           5.2         30           2
 E glutamate           7.3         42           2
 F phenylalanine       4.2         24           1
 G glycine             6.6         38           2
 H histidine           1.9         11           1
 I isoleucine          6.8         39           2
 K lysine              6.1         35           2
 L leucine            10.7         61           3
 M methionine          1.9         11           1
 N asparagine          4.7         27           2
 P proline             4.9         28           2
 Q glutamine           5.4         31           2
 R arginine            4.9         28           3
 S serine              4.4         25           2
 T threonine           4.9         28           2
 V valine              6.5         37           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytosolic malic enzyme 1 
ME3                   0.738   mitochondrial malic enzyme 3 
ME3                   0.738   mitochondrial malic enzyme 3 
ME3                   0.738   mitochondrial malic enzyme 3 
ME2                   0.562   malic enzyme 2, NAD(+)-dependent, mitochondrial [Homo...
ARFGEF1               0.008   brefeldin A-inhibited guanine nucleotide-exchange pr...
ANKRD5                0.005   ankyrin repeat domain protein 5 
ANKRD5                0.005   ankyrin repeat domain protein 5 
ROCK2                 0.004   Rho-associated, coiled-coil containing protein kinas...
LOC645314             0.004   PREDICTED: similar to hCG1642995 
LOC645314             0.004   PREDICTED: similar to hCG1642995 
LOC645314             0.004   PREDICTED: similar to DnaJ (Hsp40) homolog, subfami...
PTPN7                 0.004   protein tyrosine phosphatase, non-receptor type 7 is...
PTPN7                 0.004   protein tyrosine phosphatase, non-receptor type 7 is...
EXOC6                 0.004   SEC15-like 1 isoform a 
EXOC6                 0.004   SEC15-like 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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