Guide to the Human Genome
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Name: LOC729669 Sequence: fasta or formatted (157aa) NCBI GI: 169163737
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {157aa} PREDICTED: hypothetical protein
alt prot {157aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         17           2
 C cysteine            2.5          4           2
 D aspartate           1.3          2           1
 E glutamate           8.3         13           1
 F phenylalanine       1.3          2           1
 G glycine            10.8         17           2
 H histidine           1.3          2           1
 I isoleucine          4.5          7           1
 K lysine              2.5          4           1
 L leucine             8.3         13           3
 M methionine          1.3          2           1
 N asparagine          1.9          3           2
 P proline            11.5         18           2
 Q glutamine           3.2          5           1
 R arginine            6.4         10           2
 S serine             10.8         17           2
 T threonine           3.8          6           2
 V valine              7.0         11           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC729669             0.997   PREDICTED: hypothetical protein 
LOC729669             0.997   PREDICTED: hypothetical protein 
GATA4                 0.034   GATA binding protein 4 
TTC9B                 0.034   tetratricopeptide repeat domain 9B 
LOC100133142          0.034   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.034   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100292688          0.034   PREDICTED: hypothetical protein 
COL5A1                0.031   alpha 1 type V collagen preproprotein 
VWA1                  0.031   von Willebrand factor A domain containing 1 isoform ...
VWA1                  0.031   von Willebrand factor A domain containing 1 isoform ...
C2orf71               0.027   hypothetical protein LOC388939 
MARCO                 0.027   macrophage receptor with collagenous structure 
LMTK3                 0.027   lemur tyrosine kinase 3 
SFPQ                  0.027   splicing factor proline/glutamine rich (polypyrimidin...
TAF6L                 0.027   TAF6-like RNA polymerase II 
CDK5R2                0.027   cyclin-dependent kinase 5, regulatory subunit 2 [Homo...
FLJ37078              0.027   hypothetical protein LOC222183 
FAM83H                0.024   FAM83H 
SHANK3                0.024   SH3 and multiple ankyrin repeat domains 3 
MYLK3                 0.024   myosin light chain kinase 3 
TAF4                  0.024   TBP-associated factor 4 
FOXD1                 0.024   forkhead box D1 
AEBP2                 0.024   AE binding protein 2 isoform b 
AEBP2                 0.024   AE binding protein 2 isoform a 
KLF2                  0.024   Kruppel-like factor 
ZNF414                0.024   zinc finger protein 414 isoform 1 
ZNF414                0.024   zinc finger protein 414 isoform 2 
OSBPL10               0.024   oxysterol-binding protein-like protein 10 
COL4A3                0.020   alpha 3 type IV collagen isoform 5 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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