Search of human proteins with 169161027

Search of human proteins with 169161027

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169161027 PREDICTED: hypothetical protein [Homo sapiens]
         (219 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169161027 PREDICTED: hypothetical protein [Homo sapiens]           460   e-130
gi|113403778 PREDICTED: hypothetical protein [Homo sapiens]           459   e-129
gi|113411962 PREDICTED: hypothetical protein [Homo sapiens]           441   e-124
gi|226693407 TBC1 domain family, member 3H [Homo sapiens]              37   0.010
gi|14149985 TBC1 domain family, member 3F [Homo sapiens]               37   0.010
gi|239756926 PREDICTED: similar to TBC1 domain family, member 3 ...    37   0.010
gi|183583565 TBC1 domain family, member 3 [Homo sapiens]               37   0.010
gi|183583567 TBC1 domain family, member 3E [Homo sapiens]              37   0.010
gi|149999613 TBC1 domain family, member 3B [Homo sapiens]              37   0.010
gi|183583563 TBC1 domain family, member 3D [Homo sapiens]              37   0.010
gi|20070376 solute carrier family 38, member 10 isoform b [Homo ...    37   0.010
gi|90577185 TBC1 domain family member 3C [Homo sapiens]                37   0.010
gi|157502205 TBC1 domain family, member 3G [Homo sapiens]              37   0.010
gi|197927160 solute carrier family 4, sodium bicarbonate cotrans...    36   0.029
gi|4507025 solute carrier family 4, sodium bicarbonate cotranspo...    36   0.029
gi|148596928 solute carrier family 4, sodium bicarbonate cotrans...    36   0.029
gi|4503519 eukaryotic translation initiation factor 3, subunit 5...    36   0.029
gi|110227615 echinoderm microtubule associated protein like 3 [H...    35   0.038
gi|239745480 PREDICTED: hypothetical protein XP_002343504 [Homo ...    35   0.065
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    35   0.065
gi|222537747 hypothetical protein LOC342979 [Homo sapiens]             34   0.085
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]    33   0.14 
gi|89264696 angiopoietin-like 4 protein isoform b precursor [Hom...    32   0.42 
gi|21536398 angiopoietin-like 4 protein isoform a precursor [Hom...    32   0.42 
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    32   0.42 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    32   0.42 
gi|26638655 potassium voltage-gated channel KQT-like protein 4 i...    32   0.55 
gi|26638653 potassium voltage-gated channel KQT-like protein 4 i...    32   0.55 
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]           32   0.55 
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]           32   0.55 

>gi|169161027 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score =  460 bits (1184), Expect = e-130
 Identities = 219/219 (100%), Positives = 219/219 (100%)

Query: 1   MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDD 60
           MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDD
Sbjct: 1   MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDD 60

Query: 61  EFIPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQG 120
           EFIPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQG
Sbjct: 61  EFIPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQG 120

Query: 121 GHRLLQWVKAAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSA 180
           GHRLLQWVKAAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSA
Sbjct: 121 GHRLLQWVKAAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSA 180

Query: 181 VLLAPESPNAQASNVTGATHRSNLSGFPRPCSVVLPGGP 219
           VLLAPESPNAQASNVTGATHRSNLSGFPRPCSVVLPGGP
Sbjct: 181 VLLAPESPNAQASNVTGATHRSNLSGFPRPCSVVLPGGP 219


>gi|113403778 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score =  459 bits (1180), Expect = e-129
 Identities = 218/219 (99%), Positives = 218/219 (99%)

Query: 1   MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDD 60
           MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDD
Sbjct: 1   MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDD 60

Query: 61  EFIPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQG 120
           EFIPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQG
Sbjct: 61  EFIPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQG 120

Query: 121 GHRLLQWVKAAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSA 180
           GHRLLQWVKAAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSA
Sbjct: 121 GHRLLQWVKAAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSA 180

Query: 181 VLLAPESPNAQASNVTGATHRSNLSGFPRPCSVVLPGGP 219
           VLLAPESPN QASNVTGATHRSNLSGFPRPCSVVLPGGP
Sbjct: 181 VLLAPESPNTQASNVTGATHRSNLSGFPRPCSVVLPGGP 219


>gi|113411962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 254

 Score =  441 bits (1134), Expect = e-124
 Identities = 218/254 (85%), Positives = 218/254 (85%), Gaps = 35/254 (13%)

Query: 1   MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVP------------ 48
           MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVP            
Sbjct: 1   MDIKRSFRGHLFNLLGAHGRRCTVTLWFPLHPPPSFVLSLSAAGSNVPALDLPPHGRTTA 60

Query: 49  -----------------------GLFKGLKAKGDDEFIPQVLVVRPGEYQTLLPARGPTS 85
                                  GLFKGLKAKGDDEFIPQVLVVRPGEYQTLLPARGPTS
Sbjct: 61  QLSPRGSTAQKVRQRPCQLPSLPGLFKGLKAKGDDEFIPQVLVVRPGEYQTLLPARGPTS 120

Query: 86  DPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAHRAF 145
           DPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAHRAF
Sbjct: 121 DPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAHRAF 180

Query: 146 SFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAPESPNAQASNVTGATHRSNLS 205
           SFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAPESPN QASNVTGATHRSNLS
Sbjct: 181 SFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAPESPNTQASNVTGATHRSNLS 240

Query: 206 GFPRPCSVVLPGGP 219
           GFPRPCSVVLPGGP
Sbjct: 241 GFPRPCSVVLPGGP 254


>gi|226693407 TBC1 domain family, member 3H [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|14149985 TBC1 domain family, member 3F [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|239756926 PREDICTED: similar to TBC1 domain family, member 3
           [Homo sapiens]
          Length = 424

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 233 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPWPIWSASPPRAPRSST--- 289

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 290 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 327


>gi|183583565 TBC1 domain family, member 3 [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|183583567 TBC1 domain family, member 3E [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|149999613 TBC1 domain family, member 3B [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|183583563 TBC1 domain family, member 3D [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|20070376 solute carrier family 38, member 10 isoform b [Homo
           sapiens]
          Length = 780

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 45/155 (29%), Positives = 53/155 (34%), Gaps = 28/155 (18%)

Query: 30  LHPPPSFVLSLSAAGSNVPGLFKGLKAKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHH 89
           LHP P  VLS    G  V G   G KAKG            PG       A G T  P  
Sbjct: 603 LHPRPQAVLSEQQNGLAVGG---GEKAKGGPP---------PGN------AAGDTGQPAE 644

Query: 90  H-------PCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAH 142
                   P P   P    G            +A G      L+   +A +   + PG+ 
Sbjct: 645 DSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEGKASALQPPASGPGSG 704

Query: 143 RAFSFPWGPRQLGLG---RPPGSFWKLLQQARGRA 174
                PWG  Q+ LG   RPP SF    +Q   RA
Sbjct: 705 SPLPQPWGDAQVILGSPARPPFSFQPPAEQTPRRA 739



 Score = 27.7 bits (60), Expect = 8.0
 Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 10/80 (12%)

Query: 70  RPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSED-GSGSSSAARKATGQGGHRLLQWV 128
           RPG+ Q L  A     DP   P   G P      ED G G          +G H   Q V
Sbjct: 560 RPGQAQALEEAGDLPEDPQKVPEADGQPAVQPAKEDLGPGD---------RGLHPRPQAV 610

Query: 129 KAAQRTGRTIPGAHRAFSFP 148
            + Q+ G  + G  +A   P
Sbjct: 611 LSEQQNGLAVGGGEKAKGGP 630


>gi|90577185 TBC1 domain family member 3C [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|157502205 TBC1 domain family, member 3G [Homo sapiens]
          Length = 549

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 32  PPPSFVLSLSAAGSNVPGLFKGLK-AKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPHHH 90
           PPP+     S+A   VP    G    KGD +  P      P    +  P R P S     
Sbjct: 358 PPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSST--- 414

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATG-QGGHRLLQW 127
           PCPGGA   +T      G  S A    G QG  R LQW
Sbjct: 415 PCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQW 452


>gi|197927160 solute carrier family 4, sodium bicarbonate
           cotransporter, member 4 isoform 3 [Homo sapiens]
          Length = 1094

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 58  GDDEFIPQVLVVRPGEYQTLL----PARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAA 113
           G DEF+ +V+V+ PGE+   +    P   P+SD   +   GG  V+  G     G     
Sbjct: 369 GIDEFLDEVIVLPPGEWDPAIRIEPPKSLPSSDKRKNMYSGGENVQMNGDTPHDGGH--- 425

Query: 114 RKATGQGGHRLLQWVKAAQRTGRTIPG 140
               G GGH   +     QRTGR   G
Sbjct: 426 ----GGGGHGDCE---ELQRTGRFCGG 445


>gi|4507025 solute carrier family 4, sodium bicarbonate
           cotransporter, member 4 isoform 2 [Homo sapiens]
          Length = 1035

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 58  GDDEFIPQVLVVRPGEYQTLL----PARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAA 113
           G DEF+ +V+V+ PGE+   +    P   P+SD   +   GG  V+  G     G     
Sbjct: 325 GIDEFLDEVIVLPPGEWDPAIRIEPPKSLPSSDKRKNMYSGGENVQMNGDTPHDGGH--- 381

Query: 114 RKATGQGGHRLLQWVKAAQRTGRTIPG 140
               G GGH   +     QRTGR   G
Sbjct: 382 ----GGGGHGDCE---ELQRTGRFCGG 401


>gi|148596928 solute carrier family 4, sodium bicarbonate
           cotransporter, member 4 isoform 1 [Homo sapiens]
          Length = 1079

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 58  GDDEFIPQVLVVRPGEYQTLL----PARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAA 113
           G DEF+ +V+V+ PGE+   +    P   P+SD   +   GG  V+  G     G     
Sbjct: 369 GIDEFLDEVIVLPPGEWDPAIRIEPPKSLPSSDKRKNMYSGGENVQMNGDTPHDGGH--- 425

Query: 114 RKATGQGGHRLLQWVKAAQRTGRTIPG 140
               G GGH   +     QRTGR   G
Sbjct: 426 ----GGGGHGDCE---ELQRTGRFCGG 445


>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
           epsilon, 47kDa [Homo sapiens]
          Length = 357

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 28/87 (32%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 64  PQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQGGHR 123
           P V V  P    T +PA  P S P   P P  APV    +   S   +AA  AT   G  
Sbjct: 4   PAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPV-PAAAPASSSDPAAAAAATAAPGQT 62

Query: 124 LLQWVKAAQRTGRTIPGAHRAFSFPWG 150
                  AQ     +PG      FP G
Sbjct: 63  PASAQAPAQTPAPALPGPALPGPFPGG 89


>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
           sapiens]
          Length = 896

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 12/194 (6%)

Query: 30  LHPPPSFVLSLSAAGSNVPGLFKGLKAKGDDEFIPQVLVVRPGEYQT---LLPARGPTSD 86
           L  PPS   SL  +G+  P         G        LV R  + +T   L  + GP   
Sbjct: 46  LQVPPS---SLQGSGTPAPPGDSLAAPPGLPPTCTPSLVSRGTQTETEVELKSSPGPPGL 102

Query: 87  PHHHPCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAHRAFS 146
            +  P P GA    +G++   G SS++  A   G   +L+ ++  QR       +  + S
Sbjct: 103 SNGPPAPQGASEEPSGTQSEGGGSSSS-GAGSPGPPGILRPLQPPQRADTPRRNSSSSSS 161

Query: 147 FPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAPESPNAQAS--NVTGATHRSNL 204
               PRQ  L R   S   LL ++      G    L +P  P ++ S  N+ G + +  L
Sbjct: 162 PSERPRQ-KLSRKAISSANLLVRSGSTESRGGKDPLSSPGGPGSRRSNYNLEGISVKMFL 220

Query: 205 SGFPRPCSVVLPGG 218
            G  RP ++ +P G
Sbjct: 221 RG--RPITMYIPSG 232


>gi|239745480 PREDICTED: hypothetical protein XP_002343504 [Homo
           sapiens]
          Length = 243

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 52/198 (26%), Positives = 68/198 (34%), Gaps = 37/198 (18%)

Query: 29  PLHPPPSFVLSLSAAGSNVPGLFKGLKAKGDDEFIPQVLVVRPGEYQTLLPARGPTSDPH 88
           PL P   F  S+S + S+ PG        GD                 LLP  G  S P 
Sbjct: 33  PLLPTCCFSFSISTSPSSAPGH----SWHGDPS-------------SELLPFSGAPSSPS 75

Query: 89  HHP--CPGGAPVRNTGSEDGS----------GSSSAARKATGQGGHRLL-------QWVK 129
            HP  CP    +    +   S          G+++A  +  G    RLL       +   
Sbjct: 76  RHPGQCPWAPRLLRAWATRVSAALLTAQFTPGAAAAGPQGPGSTWRRLLASRFRCSKKSA 135

Query: 130 AAQRTGRTIPGAHRAFSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAP-ESP 188
             Q T   +     A       R LG GRPP S  + L     R GEG ++   AP  SP
Sbjct: 136 VQQLTPLLLRSPQVAIFLAGAGRALGSGRPPCSGRRRLSVPAARGGEGATSRHWAPAASP 195

Query: 189 NAQASNVTGATHRSNLSG 206
            A  +    A  R   +G
Sbjct: 196 AAGGAGKKDARKRKAPAG 213


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
            sapiens]
          Length = 1336

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 79   PARGPTSDPHHHPC--PGGAPVRNTGSEDGSGSSS--AARKATGQGGHRLLQWVKAAQRT 134
            PAR P SDP   P   PG      TG   G   ++    R A     +  L+   +    
Sbjct: 1058 PARWPRSDPESQPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAPPPCPYLDLEPSPSDSED 1117

Query: 135  GRTIPGAHRAFSFPWG------PRQLGLGRPPGSFWKLLQQARGRAG 175
              ++ GA      PW       P    LG PPG +W + +    RAG
Sbjct: 1118 SESLGGASLGGLEPWWFADFPYPYAERLGPPPGRYWSVDKLGGWRAG 1164


>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
          Length = 673

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 70  RPGEYQTLLPARGPTSDPHHHPCPGGAPVRN------TGSEDGSG 108
           +P E Q LL   GP+++P  HP P  AP R       T  E+ SG
Sbjct: 617 QPAECQPLLQGEGPSANPSAHPVPTYAPARQPEPSAPTEGEEASG 661


>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
          Length = 694

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 29  PLHPPPSFVLSLSAAGSN----VPGLFKGLKAKGDDEFIPQVLVVRPGEYQTL--LPARG 82
           P HP  S   ++++ GSN    +P        K     IP    V PGE+ +   L AR 
Sbjct: 202 PFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLIPTSPQV-PGEWPSPEELGARA 260

Query: 83  PTSDPHHHPCPGGAPVRNTGSE--DGSGSSSAARKATGQGGHRLLQWVKA 130
             + P H P    + V ++GSE  +  GSS    +  G G   +  W+K+
Sbjct: 261 AFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKS 310


>gi|89264696 angiopoietin-like 4 protein isoform b precursor [Homo
           sapiens]
          Length = 368

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 145 FSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNS--AVLLAPESPNAQ 191
           F+ PW   + G G P G FW  L++     G+ NS  AV L     NA+
Sbjct: 199 FNRPWEAYKAGFGDPHGEFWLGLEKVHSITGDRNSRLAVQLRDWDGNAE 247


>gi|21536398 angiopoietin-like 4 protein isoform a precursor [Homo
           sapiens]
          Length = 406

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 145 FSFPWGPRQLGLGRPPGSFWKLLQQARGRAGEGNS--AVLLAPESPNAQ 191
           F+ PW   + G G P G FW  L++     G+ NS  AV L     NA+
Sbjct: 237 FNRPWEAYKAGFGDPHGEFWLGLEKVHSITGDRNSRLAVQLRDWDGNAE 285


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
          Length = 2462

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 29/156 (18%)

Query: 63   IPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNT-GSEDGSGSSSAARKATGQGG 121
            +P  L   PG    +L  R P SD +  P   GAP R +  SE G  S    + +   GG
Sbjct: 2150 LPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKTSVLGGG 2209

Query: 122  HRLLQWVKAAQRTGRTIPGAHRAFSFP--------WGPRQLG------LGRPPGSFWKLL 167
               ++ V   +  G T PG  R+  +P          P ++G        +PP  F KL 
Sbjct: 2210 EDGIEPVSPPE--GMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFFSKLT 2267

Query: 168  QQARGRAGEGNSAVLLAPESPNAQASNVTGATHRSN 203
                    E NSA++ + +    Q  N    TH  N
Sbjct: 2268 --------ESNSAMVKSKK----QEINKKLNTHNRN 2291


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
          Length = 2524

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 29/156 (18%)

Query: 63   IPQVLVVRPGEYQTLLPARGPTSDPHHHPCPGGAPVRNT-GSEDGSGSSSAARKATGQGG 121
            +P  L   PG    +L  R P SD +  P   GAP R +  SE G  S    + +   GG
Sbjct: 2166 LPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKTSVLGGG 2225

Query: 122  HRLLQWVKAAQRTGRTIPGAHRAFSFP--------WGPRQLG------LGRPPGSFWKLL 167
               ++ V   +  G T PG  R+  +P          P ++G        +PP  F KL 
Sbjct: 2226 EDGIEPVSPPE--GMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFFSKLT 2283

Query: 168  QQARGRAGEGNSAVLLAPESPNAQASNVTGATHRSN 203
                    E NSA++ + +    Q  N    TH  N
Sbjct: 2284 --------ESNSAMVKSKK----QEINKKLNTHNRN 2307


>gi|26638655 potassium voltage-gated channel KQT-like protein 4
           isoform b [Homo sapiens]
          Length = 641

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 12/67 (17%)

Query: 151 PRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAPESPNAQASNVTGATHRSNLSGFPRP 210
           PR+LGLG PPG            A       L A +S   +A    G+  R  L G P P
Sbjct: 6   PRRLGLGPPPGD-----------APRAELVALTAVQSEQGEAGG-GGSPRRLGLLGSPLP 53

Query: 211 CSVVLPG 217
               LPG
Sbjct: 54  PGAPLPG 60



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQ-WV 128
           P P GAP+   GS  GSGS+   R +     +R LQ WV
Sbjct: 51  PLPPGAPLPGPGS--GSGSACGQRSSAAHKRYRRLQNWV 87


>gi|26638653 potassium voltage-gated channel KQT-like protein 4
           isoform a [Homo sapiens]
          Length = 695

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 12/67 (17%)

Query: 151 PRQLGLGRPPGSFWKLLQQARGRAGEGNSAVLLAPESPNAQASNVTGATHRSNLSGFPRP 210
           PR+LGLG PPG            A       L A +S   +A    G+  R  L G P P
Sbjct: 6   PRRLGLGPPPGD-----------APRAELVALTAVQSEQGEAGG-GGSPRRLGLLGSPLP 53

Query: 211 CSVVLPG 217
               LPG
Sbjct: 54  PGAPLPG 60



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 91  PCPGGAPVRNTGSEDGSGSSSAARKATGQGGHRLLQ-WV 128
           P P GAP+   GS  GSGS+   R +     +R LQ WV
Sbjct: 51  PLPPGAPLPGPGS--GSGSACGQRSSAAHKRYRRLQNWV 87


>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
          Length = 409

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 34/132 (25%), Positives = 48/132 (36%), Gaps = 21/132 (15%)

Query: 37  VLSLSAAGSNVPGLFKGLKA-KGDDEFIPQVLVVRPGEYQTLLPARGP-----TSDPHHH 90
           VLS +     +    +G++  K    F+  + ++R  E     PAR        + P   
Sbjct: 241 VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES 300

Query: 91  PCPGGA---PVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAHRAFSF 147
             P  A   P +   SE G G+  AA  A+            A +   R  P A    S 
Sbjct: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAAS------------ATKEAARGAPAAGEGESA 348

Query: 148 PWGPRQLGLGRP 159
           P GP  LG  RP
Sbjct: 349 PAGPEGLGQARP 360


>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
          Length = 409

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 34/132 (25%), Positives = 48/132 (36%), Gaps = 21/132 (15%)

Query: 37  VLSLSAAGSNVPGLFKGLKA-KGDDEFIPQVLVVRPGEYQTLLPARGP-----TSDPHHH 90
           VLS +     +    +G++  K    F+  + ++R  E     PAR        + P   
Sbjct: 241 VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES 300

Query: 91  PCPGGA---PVRNTGSEDGSGSSSAARKATGQGGHRLLQWVKAAQRTGRTIPGAHRAFSF 147
             P  A   P +   SE G G+  AA  A+            A +   R  P A    S 
Sbjct: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAAS------------ATKEAARGAPAAGEGESA 348

Query: 148 PWGPRQLGLGRP 159
           P GP  LG  RP
Sbjct: 349 PAGPEGLGQARP 360


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.137    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,305,105
Number of Sequences: 37866
Number of extensions: 620618
Number of successful extensions: 2567
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 2504
Number of HSP's gapped (non-prelim): 162
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.