Guide to the Human Genome
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Name: LOC645685 Sequence: fasta or formatted (219aa) NCBI GI: 113403778
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {254aa} PREDICTED: hypothetical protein
alt prot {219aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         19           2
 C cysteine            1.4          3           1
 D aspartate           2.3          5           2
 E glutamate           2.3          5           1
 F phenylalanine       4.6         10           1
 G glycine            13.7         30           2
 H histidine           4.1          9           3
 I isoleucine          1.4          3           1
 K lysine              3.2          7           1
 L leucine            10.0         22           2
 M methionine          0.5          1           1
 N asparagine          3.2          7           1
 P proline            11.0         24           3
 Q glutamine           4.1          9           2
 R arginine            8.2         18           2
 S serine              8.7         19           3
 T threonine           5.0         11           1
 V valine              5.5         12           2
 W tryptophan          1.8          4           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC645685             0.995   PREDICTED: hypothetical protein 
LOC645685             0.959   PREDICTED: hypothetical protein 
TBC1D3H               0.028   TBC1 domain family, member 3H 
TBC1D3F               0.028   TBC1 domain family, member 3F 
LOC100134348          0.028   PREDICTED: similar to TBC1 domain family, member 3 ...
TBC1D3                0.028   TBC1 domain family, member 3 
TBC1D3E               0.028   TBC1 domain family, member 3E 
TBC1D3B               0.028   TBC1 domain family, member 3B 
TBC1D3D               0.028   TBC1 domain family, member 3D 
SLC38A10              0.028   solute carrier family 38, member 10 isoform b 
TBC1D3C               0.028   TBC1 domain family member 3C 
TBC1D3G               0.028   TBC1 domain family, member 3G 
SLC4A4                0.025   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.025   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.025   solute carrier family 4, sodium bicarbonate cotrans...
EIF3F                 0.025   eukaryotic translation initiation factor 3, subunit 5...
EML3                  0.023   echinoderm microtubule associated protein like 3 [H...
GRIN2D                0.023   N-methyl-D-aspartate receptor subunit 2D precursor ...
PALM3                 0.021   hypothetical protein LOC342979 
SAMD4B                0.018   sterile alpha motif domain containing 4B 
LOC100288583          0.018   PREDICTED: hypothetical protein XP_002343504 
NCOR2                 0.016   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.016   nuclear receptor co-repressor 2 isoform 1 
LOC649238             0.016   PREDICTED: similar to hCG1645335 
LOC649238             0.016   PREDICTED: similar to hCG1645335 
SLC4A7                0.016   solute carrier family 4, sodium bicarbonate cotrans...
ANGPTL4               0.014   angiopoietin-like 4 protein isoform b precursor [Hom...
ANGPTL4               0.014   angiopoietin-like 4 protein isoform a precursor [Hom...
DIDO1                 0.014   death inducer-obliterator 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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