Guide to the Human Genome
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Name: PLA2G4C Sequence: fasta or formatted (541aa) NCBI GI: 226693354
Description:

phospholipase A2, group IVC isoform 1 precursor

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [551aa] phospholipase A2, group IVC isoform 2 precursor
alt prot [527aa] phospholipase A2, group IVC isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         45           2
 C cysteine            1.3          7           2
 D aspartate           5.0         27           1
 E glutamate           8.1         44           2
 F phenylalanine       4.1         22           1
 G glycine             6.7         36           3
 H histidine           3.5         19           2
 I isoleucine          4.6         25           2
 K lysine              6.5         35           3
 L leucine            11.6         63           3
 M methionine          1.8         10           1
 N asparagine          2.8         15           1
 P proline             5.0         27           3
 Q glutamine           2.6         14           1
 R arginine            5.7         31           3
 S serine              6.7         36           2
 T threonine           5.9         32           2
 V valine              5.0         27           3
 W tryptophan          2.4         13           1
 Y tyrosine            2.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IVC isoform 1 precursor [Ho... 
PLA2G4C               0.978   phospholipase A2, group IVC isoform 2 precursor [Ho...
PLA2G4C               0.971   phospholipase A2, group IVC isoform 3 
PLA2G4F               0.158   phospholipase A2, group IVF 
PLA2G4D               0.143   phospholipase A2, group IVD 
PLA2G4A               0.132   cytosolic phospholipase A2, group IVA 
PLA2G4B               0.130   phospholipase A2, group IVB 
JMJD7-PLA2G4B         0.130   JMJD7-PLA2G4B protein 
PLA2G4E               0.120   phospholipase A2, group 4E 
PITPNM2               0.007   phosphatidylinositol transfer protein, membrane-asso...
RB1CC1                0.006   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.006   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
ZSCAN12               0.004   zinc finger and SCAN domain containing 12 
ZFYVE27               0.004   zinc finger, FYVE domain containing 27 isoform b [Ho...
EVC                   0.004   Ellis van Creveld syndrome protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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