Guide to the Human Genome
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Name: PLA2G4F Sequence: fasta or formatted (849aa) NCBI GI: 67972429
Description:

phospholipase A2, group IVF

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         57           2
 C cysteine            1.8         15           1
 D aspartate           4.7         40           2
 E glutamate           7.1         60           2
 F phenylalanine       4.1         35           1
 G glycine             7.2         61           3
 H histidine           2.0         17           1
 I isoleucine          2.5         21           1
 K lysine              3.2         27           1
 L leucine            14.0        119           3
 M methionine          1.5         13           2
 N asparagine          2.6         22           2
 P proline             6.6         56           2
 Q glutamine           6.0         51           2
 R arginine            5.8         49           2
 S serine              7.2         61           2
 T threonine           5.1         43           1
 V valine              6.7         57           2
 W tryptophan          1.6         14           1
 Y tyrosine            3.7         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IVF 
PLA2G4D               0.330   phospholipase A2, group IVD 
PLA2G4B               0.330   phospholipase A2, group IVB 
JMJD7-PLA2G4B         0.330   JMJD7-PLA2G4B protein 
PLA2G4E               0.324   phospholipase A2, group 4E 
PLA2G4A               0.162   cytosolic phospholipase A2, group IVA 
PLA2G4C               0.100   phospholipase A2, group IVC isoform 3 
PLA2G4C               0.100   phospholipase A2, group IVC isoform 1 precursor [Ho...
PLA2G4C               0.100   phospholipase A2, group IVC isoform 2 precursor [Ho...
MCTP2                 0.014   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.014   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.014   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
MCTP1                 0.012   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.012   multiple C2 domains, transmembrane 1 isoform L [Hom...
RPH3A                 0.010   rabphilin 3A homolog isoform 1 
RPH3A                 0.010   rabphilin 3A homolog isoform 2 
EP400                 0.009   E1A binding protein p400 
PCLO                  0.009   piccolo isoform 2 
PCLO                  0.009   piccolo isoform 1 
LOC100132214          0.008   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.008   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.008   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.008   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.008   RAS p21 protein activator 4 isoform 2 
RASA4                 0.008   RAS p21 protein activator 4 isoform 1 
ITSN2                 0.008   intersectin 2 isoform 3 
ITSN2                 0.008   intersectin 2 isoform 1 
NEDD4L                0.008   neural precursor cell expressed, developmentally dow...
NEDD4L                0.008   neural precursor cell expressed, developmentally do...
NEDD4L                0.008   neural precursor cell expressed, developmentally do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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