Guide to the Human Genome
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Name: ZNF417 Sequence: fasta or formatted (575aa) NCBI GI: 112983683
Description:

zinc finger protein 417

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         25           4
 C cysteine            6.4         37           1
 D aspartate           2.3         13           2
 E glutamate           7.8         45           2
 F phenylalanine       4.5         26           1
 G glycine             8.3         48           1
 H histidine           7.0         40           2
 I isoleucine          2.3         13           1
 K lysine              8.5         49           2
 L leucine             5.6         32           2
 M methionine          0.7          4           1
 N asparagine          2.4         14           1
 P proline             3.7         21           2
 Q glutamine           6.1         35           2
 R arginine            8.0         46           2
 S serine              8.7         50           3
 T threonine           4.9         28           1
 V valine              4.5         26           1
 W tryptophan          0.3          2           1
 Y tyrosine            3.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 417 
ZNF587                0.980   zinc finger protein 587 
LOC100293516          0.629   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.629   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.629   PREDICTED: hypothetical protein XP_002343703 
ZNF418                0.615   zinc finger protein 418 
ZNF814                0.576   zinc finger protein 814 
ZNF256                0.529   zinc finger protein 256 
ZNF776                0.510   zinc finger protein 776 
ZNF530                0.480   zinc finger protein 530 
ZNF211                0.478   zinc finger protein 211 isoform 1 
ZNF211                0.477   zinc finger protein 211 isoform 2 
ZNF304                0.470   zinc finger protein 304 
ZNF17                 0.458   zinc finger protein 17 
ZNF132                0.447   zinc finger protein 132 
ZNF416                0.442   zinc finger protein 416 
ZNF551                0.436   zinc finger protein 551 
ZNF549                0.420   zinc finger protein 549 
ZNF792                0.407   zinc finger protein 792 
ZNF420                0.401   zinc finger protein 420 
ZNF30                 0.394   zinc finger protein 30 isoform b 
ZNF30                 0.392   zinc finger protein 30 isoform a 
ZNF30                 0.392   zinc finger protein 30 isoform a 
ZNF548                0.390   zinc finger protein 548 
ZNF749                0.388   zinc finger protein 749 
ZNF135                0.380   zinc finger protein 135 
ZNF568                0.380   zinc finger protein 568 
LOC100287429          0.379   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.379   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.379   PREDICTED: hypothetical protein XP_002343927 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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