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Search of human proteins with 16753205
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
(561 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens] 1096 0.0
gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens] 1081 0.0
gi|16753207 ubiquilin 2 [Homo sapiens] 827 0.0
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 627 e-180
gi|8567418 ubiquilin 3 [Homo sapiens] 342 4e-94
gi|145580580 ubiquilin-like [Homo sapiens] 189 8e-48
gi|41152107 ubiquitin-like 7 [Homo sapiens] 50 5e-06
gi|14249682 ubiquitin-like 7 [Homo sapiens] 50 5e-06
gi|161019170 mucin 5AC [Homo sapiens] 50 7e-06
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 50 7e-06
gi|67010025 Sp4 transcription factor [Homo sapiens] 48 2e-05
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 46 1e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 44 3e-04
gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform... 44 4e-04
gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform... 44 4e-04
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 4e-04
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 4e-04
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 44 4e-04
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 42 0.002
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 41 0.003
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 41 0.003
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom... 41 0.003
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ... 41 0.003
gi|67191208 ubiquitin C [Homo sapiens] 41 0.003
gi|60498992 forkhead box P4 isoform 3 [Homo sapiens] 41 0.003
gi|29789367 forkhead box P4 isoform 2 [Homo sapiens] 41 0.003
gi|60498989 forkhead box P4 isoform 1 [Homo sapiens] 41 0.003
gi|189011568 adenomatous polyposis coli [Homo sapiens] 40 0.004
gi|189011566 adenomatous polyposis coli [Homo sapiens] 40 0.004
>gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
Length = 561
Score = 1096 bits (2835), Expect = 0.0
Identities = 561/561 (100%), Positives = 561/561 (100%)
Query: 1 MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ 60
MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ
Sbjct: 1 MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ 60
Query: 61 FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT 120
FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT
Sbjct: 61 FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT 120
Query: 121 NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL 180
NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL
Sbjct: 121 NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL 180
Query: 181 SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE 240
SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE
Sbjct: 181 SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE 240
Query: 241 LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV 300
LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV
Sbjct: 241 LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV 300
Query: 301 SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA
Sbjct: 301 SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNP 420
PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNP
Sbjct: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNP 420
Query: 421 DTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPS 480
DTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPS
Sbjct: 421 DTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPS 480
Query: 481 ENTSPTAGTTEPGHQQFIQQMLQALAGVNPQLQNPEVRFQQQLEQLSAMGFLNREANLQA 540
ENTSPTAGTTEPGHQQFIQQMLQALAGVNPQLQNPEVRFQQQLEQLSAMGFLNREANLQA
Sbjct: 481 ENTSPTAGTTEPGHQQFIQQMLQALAGVNPQLQNPEVRFQQQLEQLSAMGFLNREANLQA 540
Query: 541 LIATGGDINAAIERLLGSQPS 561
LIATGGDINAAIERLLGSQPS
Sbjct: 541 LIATGGDINAAIERLLGSQPS 561
>gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]
Length = 589
Score = 1081 bits (2796), Expect = 0.0
Identities = 561/589 (95%), Positives = 561/589 (95%), Gaps = 28/589 (4%)
Query: 1 MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ 60
MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ
Sbjct: 1 MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ 60
Query: 61 FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT 120
FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT
Sbjct: 61 FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT 120
Query: 121 NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL 180
NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL
Sbjct: 121 NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL 180
Query: 181 SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE 240
SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE
Sbjct: 181 SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE 240
Query: 241 LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV 300
LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV
Sbjct: 241 LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV 300
Query: 301 SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA
Sbjct: 301 SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAA----- 415
PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAA
Sbjct: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLN 420
Query: 416 -----------------------QMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL 452
QMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL
Sbjct: 421 NPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL 480
Query: 453 IPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQALAGVNPQL 512
IPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQALAGVNPQL
Sbjct: 481 IPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQALAGVNPQL 540
Query: 513 QNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS 561
QNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS
Sbjct: 541 QNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS 589
>gi|16753207 ubiquilin 2 [Homo sapiens]
Length = 624
Score = 827 bits (2135), Expect = 0.0
Identities = 452/635 (71%), Positives = 499/635 (78%), Gaps = 85/635 (13%)
Query: 1 MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ 60
MAE+GES GPP A A+G+ AAA AEPKI+KVTVKTPKEKEEFAVPENSSVQQ
Sbjct: 1 MAENGESSGPPRPSRGPAAAQGS----AAAPAEPKIIKVTVKTPKEKEEFAVPENSSVQQ 56
Query: 61 FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQT 120
FKE ISKRFKS TDQLVLIFAGKILKDQDTL QHGIHDGLTVHLVIK+QNRPQ S Q +
Sbjct: 57 FKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPS 116
Query: 121 NTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL 180
N AG+N T++STP SNST S SNPFGLG LGGLAGLSSLGL++TNFSELQSQMQ+QL+
Sbjct: 117 NAAGTNTTSASTPRSNSTPISTNSNPFGLGSLGGLAGLSSLGLSSTNFSELQSQMQQQLM 176
Query: 181 SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE 240
++PEMM+QIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISH+LNNPDIMRQTLE
Sbjct: 177 ASPEMMIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLE 236
Query: 241 LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV 300
+ARNPAMMQEMMRNQD ALSNLESIPGGYNALRRMYTDIQEPML+AAQEQFGGNPFAS+
Sbjct: 237 IARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFASVG 296
Query: 301 SNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
S++SSGEG+QPSRTENRDPLPNPWAP + SSA++ T ++ G +G+++S +G + A
Sbjct: 297 SSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSGSGNSSSNATGNTVAA 356
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAA----- 415
N V AS+F+TPGMQSLLQQITENPQL+QNMLSAPYMRSMMQSLSQNPDLAA
Sbjct: 357 ANYV----ASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSLSQNPDLAAQMMLN 412
Query: 416 -----------------------QMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL 452
QMQNPDTLSAMSNPRAMQAL+QIQQGLQTLATEAPGL
Sbjct: 413 SPLFTANPQLQEQMRPQLPAFLQQMQNPDTLSAMSNPRAMQALMQIQQGLQTLATEAPGL 472
Query: 453 IPGFTPG---------------------------------LGALGSTG-----GSSGTNG 474
IP FTPG +G +G TG GS+G+ G
Sbjct: 473 IPSFTPGVGVGVLGTAIGPVGPVTPIGPIGPIVPFTPIGPIGPIGPTGPAAPPGSTGSGG 532
Query: 475 ------SNATPSENTSPTAGTTEPG-HQQFIQQMLQALAGVN-PQLQNPEVRFQQQLEQL 526
S+A PSE TSP T+E G +QQFIQQM+QALAG N PQL NPEVRFQQQLEQL
Sbjct: 533 PTGPTVSSAAPSETTSP---TSESGPNQQFIQQMVQALAGANAPQLPNPEVRFQQQLEQL 589
Query: 527 SAMGFLNREANLQALIATGGDINAAIERLLGSQPS 561
+AMGFLNREANLQALIATGGDINAAIERLLGSQPS
Sbjct: 590 NAMGFLNREANLQALIATGGDINAAIERLLGSQPS 624
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 627 bits (1617), Expect = e-180
Identities = 361/612 (58%), Positives = 424/612 (69%), Gaps = 90/612 (14%)
Query: 26 PAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKIL 85
P+ A + P ++VTVKTPK+KEE + + +SV++FKEEIS+RFK+ DQLVLIFAGKIL
Sbjct: 4 PSGAETRPP--IRVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKIL 61
Query: 86 KDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNT------AGSNVTTSS---TPNSN 136
KD DTL+QHGI DGLTVHLVIKT + QD +A ++ A + TT + TP
Sbjct: 62 KDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTPDPASAPSTTPASPATPAQP 121
Query: 137 STSGSATSNPFG-------------------------LGGLGGLAGLSSLGLNTTNFSEL 171
STSGSA+S+ L G GG+ GL SLGL + NF EL
Sbjct: 122 STSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSLGLGSANFMEL 181
Query: 172 QSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNN 231
Q QMQRQL+SNPEM+ QIMENP VQ M+SNPDLMR +IMANPQMQQL++RNPEISHMLNN
Sbjct: 182 QQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNN 241
Query: 232 PDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQF 291
P++MRQT+ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPM SAA+EQF
Sbjct: 242 PELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQF 301
Query: 292 GGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTAS 351
G NPF+SL N+ S SQP RTENR+PLPNPW+P S + SG T G S
Sbjct: 302 GNNPFSSLAGNSDS-SSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGG-------S 353
Query: 352 GTSGQSTTAPN----LVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSL 407
GTS T N +G+ MFN+P MQ+LLQQI+ENPQLMQN++SAPYMRSMMQ+L
Sbjct: 354 GTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTL 413
Query: 408 SQNPDLAA----------------------------QMQNPDTLSAMSNPRAMQALLQIQ 439
+QNPD AA QMQNP++LS ++NPRAMQALLQIQ
Sbjct: 414 AQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQ 473
Query: 440 QGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNA--TPSENTS--PTAGTTEP--- 492
QGLQTL TEAPGL+ P LG+ G + + + GSNA TP TS T T+ P
Sbjct: 474 QGLQTLQTEAPGLV----PSLGSFGISRTPAPSAGSNAGSTPEAPTSSPATPATSSPTGA 529
Query: 493 --GHQQFIQQMLQALAGV-NPQLQNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDIN 549
QQ +QQM+Q LAG N Q+Q PEVRFQQQLEQL++MGF+NREANLQALIATGGDIN
Sbjct: 530 SSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANLQALIATGGDIN 589
Query: 550 AAIERLLGSQPS 561
AAIERLLGSQ S
Sbjct: 590 AAIERLLGSQLS 601
>gi|8567418 ubiquilin 3 [Homo sapiens]
Length = 655
Score = 342 bits (878), Expect = 4e-94
Identities = 203/469 (43%), Positives = 272/469 (57%), Gaps = 33/469 (7%)
Query: 17 AAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQL 76
A G E + A +P ++KVTVKTPK+KE+F+V + ++QQ KEEIS+RFK+H DQL
Sbjct: 2 AKGGEALPQGSPAPVQDPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQL 61
Query: 77 VLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSN 136
VLIFAGKILKD D+L+Q G+ DGLTVHLVIK Q+R + + + S P +
Sbjct: 62 VLIFAGKILKDPDSLAQCGVRDGLTVHLVIKRQHRAMGNECPAASVPTQGPSPGSLPQPS 121
Query: 137 STSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQ 196
S + F LG L GLS LGL F + S + RQ +S PE + Q++++PF+
Sbjct: 122 SIYPADGPPAFSLGLL---TGLSRLGLAYRGFPDQPSSLMRQHVSVPEFVTQLIDDPFIP 178
Query: 197 SMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQD 256
+LSN L+RQL++ NP MQQLIQ NPEI H+LNNP+IMRQTLE RNPAMMQEM+R+QD
Sbjct: 179 GLLSNTGLVRQLVLDNPHMQQLIQHNPEIGHILNNPEIMRQTLEFLRNPAMMQEMIRSQD 238
Query: 257 RALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTEN 316
R LSNLESIPGGYN L MYTDI +PML+A QEQFGGNPFA+ ++ ++ SQPSR EN
Sbjct: 239 RVLSNLESIPGGYNVLCTMYTDIMDPMLNAVQEQFGGNPFATATTDNATTTTSQPSRMEN 298
Query: 317 RDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPG 376
DPLPNPW ST GG+ + G AP+ + +
Sbjct: 299 CDPLPNPW--------------TSTHGGS--GSRQGRQDGDQDAPD-IRNRFPNFLGIIR 341
Query: 377 MQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQN-PDTLSAMSNPRAMQAL 435
+ LQQ+ ENPQ + Y++ +LSQ+ + + P + + P + Q L
Sbjct: 342 LYDYLQQLHENPQSL-----GTYLQGTASALSQSQEPPPSVNRVPPSSPSSQEPGSGQPL 396
Query: 436 LQIQQGLQTLATEAPGLIPGFT--PGLGALGSTGGSSGTNGSNATPSEN 482
+ +++A + P F P + G G G S+ S N
Sbjct: 397 PE-----ESVAIKGRSSCPAFLRYPTENSTGQGGDQDGAGKSSTGHSTN 440
>gi|145580580 ubiquilin-like [Homo sapiens]
Length = 475
Score = 189 bits (479), Expect = 8e-48
Identities = 146/445 (32%), Positives = 221/445 (49%), Gaps = 52/445 (11%)
Query: 38 KVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIH 97
+V VKT +++F V ++ SV+QFKE + F+ DQLVL+F G +LKD DTLSQ GI
Sbjct: 32 RVIVKTAGNQKDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
Query: 98 DGLTVHLVIKTQ--NRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGL 155
DG T++LVIK++ +R HS + T +T ++S T L
Sbjct: 92 DGHTIYLVIKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPTGMNQAPVELAHF 151
Query: 156 AGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQM 215
G + ++T N +S+PE Q++ENP +Q +LSN + M Q I +
Sbjct: 152 VGSDAPKVHTQNLE----------VSHPECKAQMLENPSIQRLLSNMEFMWQFISEHLDT 201
Query: 216 QQLIQRNPEISH-MLNNPDIMRQTLELARNPAMMQEMMRNQDRALS-----------NLE 263
QQL+Q+NPE+S +L+N +I+ QTLELARN AM+QE+M+ Q + + LE
Sbjct: 202 QQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLE 261
Query: 264 SIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVS-----NTSSGEGSQPSRTENRD 318
++PGG NAL + Y DI + ML++ Q+ FGGNPF +L++ S P E +D
Sbjct: 262 TMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQD 321
Query: 319 PLPNPWAPQTSQSSS-------ASSGTASTVGGTTGSTAS--GTSGQS----TTAPNLVP 365
L A + +SS +++ T + V T+ + + T GQS T P +P
Sbjct: 322 QLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHICATRQPAWIP 381
Query: 366 GVGASMFN----------TPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAA 415
+ + T + S Q + + QL S+ MMQ L NP LAA
Sbjct: 382 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 441
Query: 416 QMQNPDTLSAMSNPRAMQALLQIQQ 440
Q+ ++ +S Q +QQ
Sbjct: 442 QIMLFTSMPQLSEQWRQQLPTFLQQ 466
>gi|41152107 ubiquitin-like 7 [Homo sapiens]
Length = 380
Score = 50.1 bits (118), Expect = 5e-06
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 462 ALGSTGGSS------GTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQAL-AGVNPQLQN 514
AL ST SS GT G ++ S +S T + F Q + AL A P LQ+
Sbjct: 277 ALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQS 336
Query: 515 PEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIE 553
++Q QL+QL MG + E +L+AL ATGGDI AA+E
Sbjct: 337 ---QWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALE 372
Score = 37.4 bits (85), Expect = 0.037
Identities = 74/365 (20%), Positives = 140/365 (38%), Gaps = 58/365 (15%)
Query: 78 LIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNS 137
LI+ G+ LKD TL +GI G TVH++ K+ P D + + + +
Sbjct: 63 LIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEP-DQKPEPVDKVAAMREFRVLHTALH 121
Query: 138 TSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQS 197
+S S F + L L + + T LS+ + + ++++ + S
Sbjct: 122 SSSSYREAVFKM--LSNKESLDQIIVATPG------------LSSDPIALGVLQDKDLFS 167
Query: 198 MLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDR 257
+ ++P+++ L+ A+P + I + H +A + M ++
Sbjct: 168 VFADPNMLDTLVPAHPALVNAIVL---VLH------------SVAGSAPMPGTDSSSRSM 212
Query: 258 ALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENR 317
S+ +PGG+ ++ LS ++ F N ++ S+T S + +
Sbjct: 213 PSSSYRDMPGGF-----LFEG-----LSDDEDDFHPNTRSTPSSSTPSSRPASLGYSGAA 262
Query: 318 DPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGM 377
P P T + + AST ++ + GT G S+ + GV + TP
Sbjct: 263 GP-----RPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQS---GTPIT 314
Query: 378 QSLLQQITENPQLMQNMLSA---PYMRSMMQ-SLSQNPDLAAQMQNPDTLSAMSNPRAMQ 433
L Q +Q+ L A P ++S Q L Q D+ Q + + +Q
Sbjct: 315 NDLFS------QALQHALQASGQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQ 368
Query: 434 ALLQI 438
A L++
Sbjct: 369 AALEL 373
>gi|14249682 ubiquitin-like 7 [Homo sapiens]
Length = 380
Score = 50.1 bits (118), Expect = 5e-06
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 462 ALGSTGGSS------GTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQAL-AGVNPQLQN 514
AL ST SS GT G ++ S +S T + F Q + AL A P LQ+
Sbjct: 277 ALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQS 336
Query: 515 PEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIE 553
++Q QL+QL MG + E +L+AL ATGGDI AA+E
Sbjct: 337 ---QWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALE 372
Score = 37.4 bits (85), Expect = 0.037
Identities = 74/365 (20%), Positives = 140/365 (38%), Gaps = 58/365 (15%)
Query: 78 LIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNS 137
LI+ G+ LKD TL +GI G TVH++ K+ P D + + + +
Sbjct: 63 LIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEP-DQKPEPVDKVAAMREFRVLHTALH 121
Query: 138 TSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQS 197
+S S F + L L + + T LS+ + + ++++ + S
Sbjct: 122 SSSSYREAVFKM--LSNKESLDQIIVATPG------------LSSDPIALGVLQDKDLFS 167
Query: 198 MLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDR 257
+ ++P+++ L+ A+P + I + H +A + M ++
Sbjct: 168 VFADPNMLDTLVPAHPALVNAIVL---VLH------------SVAGSAPMPGTDSSSRSM 212
Query: 258 ALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENR 317
S+ +PGG+ ++ LS ++ F N ++ S+T S + +
Sbjct: 213 PSSSYRDMPGGF-----LFEG-----LSDDEDDFHPNTRSTPSSSTPSSRPASLGYSGAA 262
Query: 318 DPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGM 377
P P T + + AST ++ + GT G S+ + GV + TP
Sbjct: 263 GP-----RPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQS---GTPIT 314
Query: 378 QSLLQQITENPQLMQNMLSA---PYMRSMMQ-SLSQNPDLAAQMQNPDTLSAMSNPRAMQ 433
L Q +Q+ L A P ++S Q L Q D+ Q + + +Q
Sbjct: 315 NDLFS------QALQHALQASGQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQ 368
Query: 434 ALLQI 438
A L++
Sbjct: 369 AALEL 373
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 49.7 bits (117), Expect = 7e-06
Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 7/197 (3%)
Query: 301 SNTSSGEGSQPSRTENRDPLPNPW-APQTSQSSSASSGTASTVGGTTGSTASGTSGQSTT 359
+ S+G + PS T P P +P T+ ++++S T+S+ T + TS + +
Sbjct: 4732 TTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKS 4791
Query: 360 APNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQN 419
V + +S T G +L +Q T M + + + S
Sbjct: 4792 TATSVTPIPSSTLGTTG--TLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRAT 4849
Query: 420 PDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPG----LGALGSTGGSSGTNGS 475
T + S P L ++ T A P P TPG L L +T ++ + GS
Sbjct: 4850 SSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGS 4909
Query: 476 NATPSENTSPTAGTTEP 492
ATPS T TEP
Sbjct: 4910 TATPSSTPGTTWILTEP 4926
Score = 40.8 bits (94), Expect = 0.003
Identities = 52/199 (26%), Positives = 71/199 (35%), Gaps = 32/199 (16%)
Query: 323 PWAPQTSQSSSASSG-----------TASTVGGTTGSTASGTSGQSTTAPNLVPGVGASM 371
P P TS +++ SS TA+T TTGSTA +S T P P V S
Sbjct: 3555 PSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPP---PKVLTST 3611
Query: 372 FNTPGMQSLLQQITENPQLMQNM--LSAPYMRSMMQSLSQNPD--------LAAQMQNPD 421
TP S + +P+ + L++ +S S + P L Q P
Sbjct: 3612 ATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPEQTTTPM 3671
Query: 422 TLSAMSNPRAMQALLQIQQGLQTLAT--------EAPGLIPGFTPGLGALGSTGGSSGTN 473
+ +P + L T AT P PG T L L + ++
Sbjct: 3672 ATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTELTTAATTTAAT 3731
Query: 474 GSNATPSENTSPTAGTTEP 492
G ATPS T TEP
Sbjct: 3732 GPTATPSSTPGTTWILTEP 3750
Score = 39.3 bits (90), Expect = 0.010
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 328 TSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITEN 387
T+ +++AS+G+ +T T G+T T +T + G A+ +T Q T
Sbjct: 4899 TTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASST--------QATAG 4950
Query: 388 PQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQ-------------- 433
+ + P + S + S +P A + P S + P A
Sbjct: 4951 TPHVSTTATTPTVTSSKATPSSSPGTATAL--PALRSTATTPTATSFTAIPSSSLGTTWT 5008
Query: 434 ALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTE 491
L Q T++T P P L +T ++G GS ATPS +T TA TT+
Sbjct: 5009 RLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPS-STPGTAHTTK 5065
Score = 38.1 bits (87), Expect = 0.022
Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 26/180 (14%)
Query: 323 PWAPQTSQSSSASSG-----------TASTVGGTTGSTASGTSGQSTTAPNLVPGVGASM 371
P P TS +++ SS T +T +TGSTA+ TS T P P V +
Sbjct: 2579 PSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPP---PKVLTTT 2635
Query: 372 FNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRA 431
TP + S + +P + P +R S + P + P + + R
Sbjct: 2636 ATTPTVTSSKATPSSSP---GTATALPALR----STATTPTATSVTPIPSSSLGTTWTR- 2687
Query: 432 MQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTE 491
L Q T++T P P L +T ++G GS ATPS +T TA TT+
Sbjct: 2688 ---LSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPS-STPGTAHTTK 2743
Score = 35.4 bits (80), Expect = 0.14
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 328 TSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITEN 387
T+ +++ + T S+ GTT ++ + T P +S T G +L
Sbjct: 3726 TTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTSTATT 3785
Query: 388 PQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNP-----RAMQALLQIQQGL 442
P ++ + + +L P L + P S + P A L Q
Sbjct: 3786 PTVISSRATPSSSPGTATAL---PALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPT 3842
Query: 443 QTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTE 491
T++T P P L +T ++ GS ATPS +T TA TT+
Sbjct: 3843 ATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPS-STPGTAHTTK 3890
Score = 34.7 bits (78), Expect = 0.24
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 34/198 (17%)
Query: 299 LVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQST 358
L + ++ E + + T + P + S +++ + T ST ++ +GT ST
Sbjct: 3077 LTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVST 3136
Query: 359 TAPN-LVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQM 417
TA V A+ F++PG + L P +RS + + A
Sbjct: 3137 TATTPTVTSSKATPFSSPGTATAL----------------PALRSTATTPTATSFTAIPS 3180
Query: 418 QNPDT----LSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTN 473
+ T LS + P A T++T P P L +T ++G
Sbjct: 3181 SSLGTTWTRLSQTTTPTA------------TMSTATPSSTPETVHTSTVLTTTATTTGAT 3228
Query: 474 GSNATPSENTSPTAGTTE 491
GS ATPS +T TA TT+
Sbjct: 3229 GSVATPS-STPGTAHTTK 3245
Score = 33.5 bits (75), Expect = 0.53
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 34/207 (16%)
Query: 304 SSGEGSQPSRTE---NRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
++G + PS T + +P + + S+S GTA T +T + T+ ST
Sbjct: 4374 ATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVT 4433
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNP 420
P+ VPG +TP + + T + ++ P + + P + P
Sbjct: 4434 PSSVPGT----THTPTVLT-----TTTTTVATGSMATPSSSTQTSGTTHTPPV------P 4478
Query: 421 DTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFT----PGLGALGSTGGSSGTNG-- 474
+T +A ++ R++ ++T T A G T P G + ++GT
Sbjct: 4479 NT-TATTHGRSLSP--SSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHS 4535
Query: 475 ----SNATPSENTS---PTAGTTEPGH 494
S+ PS T+ P+ GTT PGH
Sbjct: 4536 TPALSSPHPSSRTTESPPSPGTTTPGH 4562
Score = 32.7 bits (73), Expect = 0.91
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 20/207 (9%)
Query: 297 ASLVSNTSSGEGSQPSRTE---NRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGT 353
A+ + ++G + PS T + +P + + S+S GTA T +T + T
Sbjct: 2718 ATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPT 2777
Query: 354 SGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDL 413
+ ST P+ +PG T ++L T + ++ P + + P +
Sbjct: 2778 TRGSTVTPSSIPG-------TTHTATVL--TTTTTTVATGSMATPSSSTQTSGTTHTPPV 2828
Query: 414 AAQMQNPDTLS-AMSNPRAMQ-ALLQIQQG-LQTLATEAPGLIPGFTPGLGALGSTGGSS 470
M S S+P ++ A G L T P + T L A T S
Sbjct: 2829 PNTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHT--LAATTGTTQHS 2886
Query: 471 GTNGSNATPSENTS---PTAGTTEPGH 494
S+ PS T+ P+ GTT PGH
Sbjct: 2887 TPALSSPHPSSRTTESPPSPGTTTPGH 2913
Score = 32.7 bits (73), Expect = 0.91
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 333 SASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQ 392
S+S GTA T+ +T + T+ ST P+ +PG +TP + + T +
Sbjct: 3259 SSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGT----THTPTVLT-----TTTTTVAT 3309
Query: 393 NMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL 452
++ P + + P + P+T +A ++ R++ ++T T A
Sbjct: 3310 GSMATPSSSTQTSGTTHTPPV------PNT-TATTHGRSLSP--SSPHTVRTAWTSATSG 3360
Query: 453 IPGFT----PGLGALGSTGGSSGTNG------SNATPSENTS---PTAGTTEPGH 494
G T P G + ++GT S+ PS T+ P+ GTT PGH
Sbjct: 3361 TLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGH 3415
Score = 32.7 bits (73), Expect = 0.91
Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 11/199 (5%)
Query: 299 LVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQST 358
L + ++ E + + T + P + S +++ + T ST ++ +GT ST
Sbjct: 4224 LTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVST 4283
Query: 359 TAPN-LVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQM 417
TA V A+ F++PG + L + + + SL +Q
Sbjct: 4284 TATTPTVTSSKATPFSSPGTATALPALRST---ATTPTATSFTAIPSSSLGTTWTRLSQT 4340
Query: 418 QNPDTLSAMSNPRAMQALLQIQQGLQTLA--TEAPGLI--PGFTPGLGALGSTGGSSGTN 473
P + + P + L T A T A G + P TPG A + ++ T
Sbjct: 4341 TTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGT-AHTTKVPTTTTT 4399
Query: 474 GSNATPSENTSPTAGTTEP 492
G TPS +SP T P
Sbjct: 4400 GFTVTPS--SSPGTARTPP 4416
Score = 32.3 bits (72), Expect = 1.2
Identities = 47/200 (23%), Positives = 74/200 (37%), Gaps = 20/200 (10%)
Query: 304 SSGEGSQPSRTE---NRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
++G + PS T + +P + + S+S GTA T +T + T+ ST
Sbjct: 3872 ATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVT 3931
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDL--AAQMQ 418
P+ +PG T ++L T + ++ P + + P +
Sbjct: 3932 PSSIPG-------TTHTATVLTTTTTT--VATGSMATPSSSTQTSGTTHTPPVPNTTATT 3982
Query: 419 NPDTLSAMSNPRAMQALLQIQQG-LQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNA 477
+ +L S A G L T P + TP A ST S S+
Sbjct: 3983 HGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPA--ATTSTTQHSTPALSSP 4040
Query: 478 TPSENTS---PTAGTTEPGH 494
PS T+ P+ GTT PGH
Sbjct: 4041 HPSSRTTESPPSPGTTTPGH 4060
Score = 32.3 bits (72), Expect = 1.2
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQIT 385
P+T +S+ + TA+T G TGS A+ +S T VP + F T
Sbjct: 5029 PETVHTSTVLTATATTT-GATGSVATPSSTPGTAHTTKVPTTTTTGF------------T 5075
Query: 386 ENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTL 445
P P + M ++S ++ + T + ++ M T
Sbjct: 5076 ATPSSSPGTALTPPTTTPMSTMS-TIHTSSTPETTHTSTVLTTTATMTR--------ATN 5126
Query: 446 ATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
+T P G T L L +T ++ GS AT S T TEP
Sbjct: 5127 STATPSSTLGTTRILTELTTTATTTAATGSTATLSSTPGTTWILTEP 5173
Score = 31.6 bits (70), Expect = 2.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 444 TLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
T +T P PG T L L +T ++ + GS ATPS T TEP
Sbjct: 4205 TSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSSTPGTTWILTEP 4253
Score = 31.2 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 444 TLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
T +T P PG T L L +T ++ + GS ATPS T TEP
Sbjct: 3058 TSSTAMPSSTPGTTWILTELTTTATTTESTGSTATPSSTPGTTWILTEP 3106
Score = 30.4 bits (67), Expect = 4.5
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 28/195 (14%)
Query: 323 PWAPQTSQSSSASSGTAST---VGGTTGSTASGTSGQSTTAPNLVPGVGASMF--NTPGM 377
P P TS +++ SS +T TT +T + ++G ST P+ PG + +T
Sbjct: 4200 PSTPATSSTATPSSTPGTTWILTKLTTTATTTESTG-STATPSSTPGTTWILTEPSTTAT 4258
Query: 378 QSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAM-------SNPR 430
++ T Q P++ + + + A +P T +A+ + P
Sbjct: 4259 VTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPT 4318
Query: 431 AMQ--------------ALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSN 476
A L Q T++T P P L +T ++ GS
Sbjct: 4319 ATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSV 4378
Query: 477 ATPSENTSPTAGTTE 491
ATPS +T TA TT+
Sbjct: 4379 ATPS-STPGTAHTTK 4392
Score = 29.6 bits (65), Expect = 7.7
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 444 TLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
T +T P PG T L L +T ++ + GS ATPS T GT P
Sbjct: 4707 TSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSS----TPGTAPP 4751
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 49.7 bits (117), Expect = 7e-06
Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 7/197 (3%)
Query: 301 SNTSSGEGSQPSRTENRDPLPNPW-APQTSQSSSASSGTASTVGGTTGSTASGTSGQSTT 359
+ S+G + PS T P P +P T+ ++++S T+S+ T + TS + +
Sbjct: 4262 TTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKS 4321
Query: 360 APNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQN 419
V + +S T G +L +Q T M + + + S
Sbjct: 4322 TATSVTPIPSSTLGTTG--TLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRAT 4379
Query: 420 PDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPG----LGALGSTGGSSGTNGS 475
T + S P L ++ T A P P TPG L L +T ++ + GS
Sbjct: 4380 SSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGS 4439
Query: 476 NATPSENTSPTAGTTEP 492
ATPS T TEP
Sbjct: 4440 TATPSSTPGTTWILTEP 4456
Score = 40.8 bits (94), Expect = 0.003
Identities = 52/199 (26%), Positives = 71/199 (35%), Gaps = 32/199 (16%)
Query: 323 PWAPQTSQSSSASSG-----------TASTVGGTTGSTASGTSGQSTTAPNLVPGVGASM 371
P P TS +++ SS TA+T TTGSTA +S T P P V S
Sbjct: 2975 PSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPP---PKVLTST 3031
Query: 372 FNTPGMQSLLQQITENPQLMQNM--LSAPYMRSMMQSLSQNPD--------LAAQMQNPD 421
TP S + +P+ + L++ +S S + P L Q P
Sbjct: 3032 ATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPEQTTTPM 3091
Query: 422 TLSAMSNPRAMQALLQIQQGLQTLAT--------EAPGLIPGFTPGLGALGSTGGSSGTN 473
+ +P + L T AT P PG T L L + ++
Sbjct: 3092 ATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTELTTAATTTAAT 3151
Query: 474 GSNATPSENTSPTAGTTEP 492
G ATPS T TEP
Sbjct: 3152 GPTATPSSTPGTTWILTEP 3170
Score = 39.3 bits (90), Expect = 0.010
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 328 TSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITEN 387
T+ +++AS+G+ +T T G+T T +T + G A+ +T Q T
Sbjct: 4429 TTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASST--------QATAG 4480
Query: 388 PQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQ-------------- 433
+ + P + S + S +P A + P S + P A
Sbjct: 4481 TPHVSTTATTPTVTSSKATPSSSPGTATAL--PALRSTATTPTATSFTAIPSSSLGTTWT 4538
Query: 434 ALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTE 491
L Q T++T P P L +T ++G GS ATPS +T TA TT+
Sbjct: 4539 RLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPS-STPGTAHTTK 4595
Score = 38.1 bits (87), Expect = 0.022
Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 26/180 (14%)
Query: 323 PWAPQTSQSSSASSG-----------TASTVGGTTGSTASGTSGQSTTAPNLVPGVGASM 371
P P TS +++ SS T +T +TGSTA+ TS T P P V +
Sbjct: 1889 PSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPP---PKVLTTT 1945
Query: 372 FNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRA 431
TP + S + +P + P +R S + P + P + + R
Sbjct: 1946 ATTPTVTSSKATPSSSP---GTATALPALR----STATTPTATSVTPIPSSSLGTTWTR- 1997
Query: 432 MQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTE 491
L Q T++T P P L +T ++G GS ATPS +T TA TT+
Sbjct: 1998 ---LSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPS-STPGTAHTTK 2053
Score = 37.0 bits (84), Expect = 0.048
Identities = 50/207 (24%), Positives = 79/207 (38%), Gaps = 28/207 (13%)
Query: 304 SSGEGSQPSRTE---NRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
++G + PS T + +P + + S+S GTA T +T + T+ ST
Sbjct: 3849 ATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVT 3908
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNP 420
P+ VPG +TP + + T + ++ P S Q+ P L
Sbjct: 3909 PSSVPGT----THTPTVLT-----TTTTTVATGSMATP--SSSTQTSGTPPSLITTATTI 3957
Query: 421 DTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGST------GGSSGTNG 474
+ +NP + I L T AT TP ALG+T ++ T+G
Sbjct: 3958 TATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPS-SALGTTHTPPVPNTTATTHG 4016
Query: 475 SNATPSEN-------TSPTAGTTEPGH 494
+ +PS TS T+GT H
Sbjct: 4017 RSLSPSSPHTVRTAWTSATSGTLGTTH 4043
Score = 36.6 bits (83), Expect = 0.063
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 25/175 (14%)
Query: 333 SASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQ 392
S+S GTA T+ +T + T+ ST P+ +PG +TP + + T +
Sbjct: 2624 SSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGT----THTPTVLT-----TTTTTVAT 2674
Query: 393 NMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL 452
++ P S Q+ P L + +NP + I L T AT
Sbjct: 2675 GSMATP--SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAAT 2732
Query: 453 IPGFTPGLGALGST------GGSSGTNGSNATPSEN-------TSPTAGTTEPGH 494
TP ALG+T ++ T+G + +PS TS T+GT H
Sbjct: 2733 SSTVTPS-SALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTH 2786
Score = 35.4 bits (80), Expect = 0.14
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 328 TSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITEN 387
T+ +++ + T S+ GTT ++ + T P +S T G +L
Sbjct: 3146 TTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTSTATT 3205
Query: 388 PQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNP-----RAMQALLQIQQGL 442
P ++ + + +L P L + P S + P A L Q
Sbjct: 3206 PTVISSRATPSSSPGTATAL---PALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPT 3262
Query: 443 QTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTE 491
T++T P P L +T ++ GS ATPS +T TA TT+
Sbjct: 3263 ATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPS-STPGTAHTTK 3310
Score = 34.7 bits (78), Expect = 0.24
Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 34/198 (17%)
Query: 299 LVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQST 358
L + ++ E + + T + P + S +++ + T ST ++ +GT ST
Sbjct: 2442 LTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVST 2501
Query: 359 TAPN-LVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQM 417
TA V A+ F++PG + L P +RS + + A
Sbjct: 2502 TATTPTVTSSKATPFSSPGTATAL----------------PALRSTATTPTATSFTAIPS 2545
Query: 418 QNPDT----LSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTN 473
+ T LS + P A T++T P P L +T ++G
Sbjct: 2546 SSLGTTWTRLSQTTTPTA------------TMSTATPSSTPETVHTSTVLTTTATTTGAT 2593
Query: 474 GSNATPSENTSPTAGTTE 491
GS ATPS +T TA TT+
Sbjct: 2594 GSVATPS-STPGTAHTTK 2610
Score = 33.5 bits (75), Expect = 0.53
Identities = 49/189 (25%), Positives = 71/189 (37%), Gaps = 27/189 (14%)
Query: 328 TSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPG------VGASMFNTPGMQSLL 381
T SS+ +SGT ++ TT +T + T STT P+ PG V S TP S
Sbjct: 4669 TPSSSTQTSGTPPSLT-TTATTITATG--STTNPSSTPGTTPITPVLTSTATTPAATSSK 4725
Query: 382 QQITENPQLMQNM--LSAPYMRSMMQSLSQNPD--------LAAQMQNP----DTLSAMS 427
+ +P+ + L++ +S S + P + AQ P T+ S
Sbjct: 4726 ATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSS 4785
Query: 428 NPRAMQALLQI----QQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENT 483
P + T +T P G T L L +T ++ GS AT S
Sbjct: 4786 TPETTHTSTVLTTTATMTRATNSTATPSSTLGTTRILTELTTTATTTAATGSTATLSSTP 4845
Query: 484 SPTAGTTEP 492
T TEP
Sbjct: 4846 GTTWILTEP 4854
Score = 32.7 bits (73), Expect = 0.91
Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 11/199 (5%)
Query: 299 LVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQST 358
L + ++ E + + T + P + S +++ + T ST ++ +GT ST
Sbjct: 3699 LTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVST 3758
Query: 359 TAPN-LVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQM 417
TA V A+ F++PG + L + + + SL +Q
Sbjct: 3759 TATTPTVTSSKATPFSSPGTATALPALRST---ATTPTATSFTAIPSSSLGTTWTRLSQT 3815
Query: 418 QNPDTLSAMSNPRAMQALLQIQQGLQTLA--TEAPGLI--PGFTPGLGALGSTGGSSGTN 473
P + + P + L T A T A G + P TPG A + ++ T
Sbjct: 3816 TTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGT-AHTTKVPTTTTT 3874
Query: 474 GSNATPSENTSPTAGTTEP 492
G TPS +SP T P
Sbjct: 3875 GFTVTPS--SSPGTARTPP 3891
Score = 32.3 bits (72), Expect = 1.2
Identities = 44/197 (22%), Positives = 72/197 (36%), Gaps = 15/197 (7%)
Query: 297 ASLVSNTSSGEGSQPSRTE---NRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGT 353
A+ + ++G + PS T + +P + + S+S GTA T +T + T
Sbjct: 2028 ATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPT 2087
Query: 354 SGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDL 413
+ ST P+ +PG T ++L T + ++ P S Q+ P L
Sbjct: 2088 TRGSTVTPSSIPG-------TTHTATVL--TTTTTTVATGSMATP--SSSTQTSGTPPSL 2136
Query: 414 AAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTN 473
+ +NP + I L T AT TP ALG+T N
Sbjct: 2137 TTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPS-SALGTTHTPPVPN 2195
Query: 474 GSNATPSENTSPTAGTT 490
T + P++ T
Sbjct: 2196 TMATTHGRSLPPSSPHT 2212
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 15/190 (7%)
Query: 304 SSGEGSQPSRTE---NRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA 360
++G + PS T + +P + + S+S GTA T +T + T+ ST
Sbjct: 3292 ATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVT 3351
Query: 361 PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNP 420
P+ +PG T ++L T + ++ P S Q+ P L
Sbjct: 3352 PSSIPG-------TTHTATVL--TTTTTTVATGSMATP--SSSTQTSGTPPSLTTTATTI 3400
Query: 421 DTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPS 480
+ +NP + I L T AT TP ALG+T N + T
Sbjct: 3401 TATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPS-SALGTTHTPPVPNTTATTHG 3459
Query: 481 ENTSPTAGTT 490
+ P++ T
Sbjct: 3460 RSLPPSSPHT 3469
Score = 31.6 bits (70), Expect = 2.0
Identities = 42/170 (24%), Positives = 61/170 (35%), Gaps = 15/170 (8%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQIT 385
P +S +S + + +T T +T S T+ ST +P V + TP S +T
Sbjct: 2680 PSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATS--STVT 2737
Query: 386 ENPQL-MQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQT 444
+ L + P + S +P ++ T SA S + + G
Sbjct: 2738 PSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWT-SATSGTLGTTHITEPSTGTSH 2796
Query: 445 LATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGH 494
G TP AL S SS T S P+ GTT PGH
Sbjct: 2797 TPAATTGTTQHSTP---ALSSPHPSSRTTES--------PPSPGTTTPGH 2835
Score = 31.6 bits (70), Expect = 2.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 444 TLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
T +T P PG T L L +T ++ + GS ATPS T TEP
Sbjct: 3680 TSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSSTPGTTWILTEP 3728
Score = 31.2 bits (69), Expect = 2.6
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 21/173 (12%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQIT 385
P +S +S + + +T T +T S T+ ST +P V + TP T
Sbjct: 2123 PSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAA-------T 2175
Query: 386 ENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQG-LQT 444
N + L + + +++ + +P T+ A G L T
Sbjct: 2176 SNTVTPSSALGTTHTPPVPNTMATTHGRSLPPSSPHTVRT--------AWTSATSGILGT 2227
Query: 445 LATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTS---PTAGTTEPGH 494
P + T L A T S S+ PS T+ P+ GTT PGH
Sbjct: 2228 THITEPSTVTSHT--LAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGH 2278
Score = 31.2 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 444 TLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
T +T P PG T L L +T ++ + GS ATPS T TEP
Sbjct: 2423 TSSTAMPSSTPGTTWILTELTTTATTTESTGSTATPSSTPGTTWILTEP 2471
Score = 30.8 bits (68), Expect = 3.4
Identities = 42/173 (24%), Positives = 63/173 (36%), Gaps = 21/173 (12%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQIT 385
P +S +S + + +T T +T S T+ ST +P V + TP S T
Sbjct: 3380 PSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSS----T 3435
Query: 386 ENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQG-LQT 444
P + L + + + + + +P T+ A G L T
Sbjct: 3436 VTPS---SALGTTHTPPVPNTTATTHGRSLPPSSPHTVRT--------AWTSATSGILGT 3484
Query: 445 LATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTS---PTAGTTEPGH 494
P + TP A ST S S+ PS T+ P+ GTT PGH
Sbjct: 3485 THITEPSTVTSHTPA--ATTSTTQHSTPALSSPHPSSRTTESPPSPGTTTPGH 3535
Score = 30.8 bits (68), Expect = 3.4
Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 37/227 (16%)
Query: 301 SNTSSGEGSQPSRTENRDPLPNPW-APQTSQSSSASSGTASTVGGTTGSTASGTSGQSTT 359
+ T++G PS + P W + T+ ++S S+ T S+V GTT + T+ +T
Sbjct: 3870 TTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPTVLTTTTTTV 3929
Query: 360 APNLVPGVGASMFNTPGMQSLLQQITE--------NPQLMQNMLSAPYMRSMMQSLSQNP 411
A + +S + SL+ T NP P ++ + + P
Sbjct: 3930 ATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPSSTPGTTPIP---PVLTTTATTP 3986
Query: 412 DLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLI-PGFTPGL-GALGSTGGS 469
+ P + ++ + G ++L+ +P + +T G LG+T +
Sbjct: 3987 AATSSTVTPSSALGTTHTPPVPNTTATTHG-RSLSPSSPHTVRTAWTSATSGTLGTTHIT 4045
Query: 470 SGTNGSNATPSENTS----------------------PTAGTTEPGH 494
+ G++ TP+ T P+ GTT PGH
Sbjct: 4046 EPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPGH 4092
Score = 30.4 bits (67), Expect = 4.5
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 28/195 (14%)
Query: 323 PWAPQTSQSSSASSGTAST---VGGTTGSTASGTSGQSTTAPNLVPGVGASMF--NTPGM 377
P P TS +++ SS +T TT +T + ++G ST P+ PG + +T
Sbjct: 3675 PSTPATSSTATPSSTPGTTWILTKLTTTATTTESTG-STATPSSTPGTTWILTEPSTTAT 3733
Query: 378 QSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAM-------SNPR 430
++ T Q P++ + + + A +P T +A+ + P
Sbjct: 3734 VTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPT 3793
Query: 431 AMQ--------------ALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSN 476
A L Q T++T P P L +T ++ GS
Sbjct: 3794 ATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSV 3853
Query: 477 ATPSENTSPTAGTTE 491
ATPS +T TA TT+
Sbjct: 3854 ATPS-STPGTAHTTK 3867
Score = 29.6 bits (65), Expect = 7.7
Identities = 48/204 (23%), Positives = 73/204 (35%), Gaps = 25/204 (12%)
Query: 285 SAAQEQFGGNPFASLVSNTSSGEGS--QPSRTENRDPLPNPWAPQTSQSSSASSGTASTV 342
S++ + G P + + T + GS PS T P+P P + +++ + T+STV
Sbjct: 3381 SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIP----PVLTTTATTPAATSSTV 3436
Query: 343 GGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQI-TENPQLMQNMLSAPYMR 401
T S G + T P VP A+ S + T +L ++
Sbjct: 3437 ------TPSSALGTTHTPP--VPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHIT 3488
Query: 402 SMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPG-LIPGFTPGL 460
S P A + A+S+P T + +PG PG T G
Sbjct: 3489 EPSTVTSHTP-AATTSTTQHSTPALSSPH--------PSSRTTESPPSPGTTTPGHTRGT 3539
Query: 461 GALGSTGGSSGTNGSNATPSENTS 484
+T S T S PS TS
Sbjct: 3540 SRTTATATPSKTRTSTLLPSSPTS 3563
Score = 29.6 bits (65), Expect = 7.7
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 444 TLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEP 492
T +T P PG T L L +T ++ + GS ATPS T GT P
Sbjct: 4237 TSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSS----TPGTAPP 4281
>gi|67010025 Sp4 transcription factor [Homo sapiens]
Length = 784
Score = 48.1 bits (113), Expect = 2e-05
Identities = 87/392 (22%), Positives = 140/392 (35%), Gaps = 50/392 (12%)
Query: 105 VIKTQNRPQDHSAQQTNTAG------------------SNVTTSSTPNSNSTSGSATSNP 146
+++ QN+PQ T AG S +SS+ +S+S +GSA+
Sbjct: 80 LVQLQNQPQQLELVTTQLAGNAWQLVASTPPASKENNVSQPASSSSSSSSSNNGSASPTK 139
Query: 147 FGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMR 206
G + + + S +Q Q+ QL + +QI NP S L +
Sbjct: 140 TKSGNSSTPGQFQVIQVQNPSGS-VQYQVIPQLQTVEGQQIQI--NPTSSSSLQDLQGQI 196
Query: 207 QLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAM-----MQEMMRNQDRALSN 261
QLI A L N S + ++ QT+ + P + +Q + Q + ++
Sbjct: 197 QLISAGNNQAILTAANRTASGNILAQNLANQTVPVQIRPGVSIPLQLQTLPGTQAQVVTT 256
Query: 262 LESIPGGYNALRRMYTDIQ---------EPMLSAAQEQFGGNPFASLVSNTSSGEGSQP- 311
L GG + ++ +P +A GN S +NT++ + P
Sbjct: 257 LPINIGGVTLALPVINNVAAGGGTGQVGQPAATADSGTSNGNQLVSTPTNTTTSASTMPE 316
Query: 312 SRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQS-TTAPNLVPGVGAS 370
S + + TS + SS T+ S++ T +S T A +S
Sbjct: 317 SPSSSTTCTTTASTSLTSSDTLVSSADTGQYASTSASSSERTIEESQTPAATESEAQSSS 376
Query: 371 MFNTPGMQ-------SLLQ-QITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDT 422
GMQ SL Q QI P L Q + P Q + P + Q+Q+ T
Sbjct: 377 QLQPNGMQNAQDQSNSLQQVQIVGQPILQQIQIQQP----QQQIIQAIPPQSFQLQSGQT 432
Query: 423 LSAMSNPRAMQALLQIQQGLQTLATEAPGLIP 454
+ + LQ Q L AP L P
Sbjct: 433 IQTIQQQPLQNVQLQAVNPTQVL-IRAPTLTP 463
Score = 35.8 bits (81), Expect = 0.11
Identities = 61/242 (25%), Positives = 93/242 (38%), Gaps = 41/242 (16%)
Query: 280 QEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTA 339
Q L Q GN + LV++T P+ EN P A +S SSS+++G+A
Sbjct: 86 QPQQLELVTTQLAGNAW-QLVASTP------PASKENNVSQP---ASSSSSSSSSNNGSA 135
Query: 340 STVGGTTGSTAS------------GTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITEN 387
S +G++++ S Q P L G + P S LQ +
Sbjct: 136 SPTKTKSGNSSTPGQFQVIQVQNPSGSVQYQVIPQLQTVEGQQIQINPTSSSSLQDLQGQ 195
Query: 388 PQLM-----QNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQAL------- 435
QL+ Q +L+A + L+QN LA Q +S P +Q L
Sbjct: 196 IQLISAGNNQAILTAANRTASGNILAQN--LANQTVPVQIRPGVSIPLQLQTLPGTQAQV 253
Query: 436 ---LQIQQGLQTLATEAPGLIP--GFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTT 490
L I G TLA + G T +G +T S +NG+ + + T+ +T
Sbjct: 254 VTTLPINIGGVTLALPVINNVAAGGGTGQVGQPAATADSGTSNGNQLVSTPTNTTTSAST 313
Query: 491 EP 492
P
Sbjct: 314 MP 315
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 45.8 bits (107), Expect = 1e-04
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 14/237 (5%)
Query: 28 AAASAEPKIMKVTVKT-PKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILK 86
+ A EP ++V VKT + F V +V++FKE I+ +++ LI+ G++L+
Sbjct: 8 STAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQ 67
Query: 87 DQDTLSQHGIHDGLTVHLVIKTQNRPQDH----SAQQTNTAGSNVTTSSTPNSNSTSGSA 142
D L ++ + G +HLV + PQ H ++ T +A + S P + S
Sbjct: 68 DDKKLQEYNV-GGKVIHLVERAP--PQTHLPSGASSGTGSASATHGGGSPPGTRGPGASV 124
Query: 143 TSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPF--VQSMLS 200
+ G L S G ++ Q + S P + + + ++ +Q++LS
Sbjct: 125 HDRNANSYVMVGTFNLPSDGSAVDVHINME---QAPIQSEPRVRLVMAQHMIRDIQTLLS 181
Query: 201 NPDLMRQLIMANPQMQQLIQRNPEISHMLNNP-DIMRQTLELARNPAMMQEMMRNQD 256
+ + L Q Q P+ + P + QT E + A +E M ++
Sbjct: 182 RMETLPYLQCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEE 238
Score = 32.7 bits (73), Expect = 0.91
Identities = 44/186 (23%), Positives = 61/186 (32%), Gaps = 30/186 (16%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA--PNLVPGVGASMFNTPGMQSLL-- 381
PQT S ASSGT S G + GT G + N V FN P S +
Sbjct: 90 PQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDV 149
Query: 382 ---------------------QQITENPQLMQNMLSAPYMR----SMMQSLSQNPDLAAQ 416
I + L+ M + PY++ Q P A
Sbjct: 150 HINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAV 209
Query: 417 MQNPDTLSAM-SNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGS 475
P LS+ S P +A + + + AP P TPG G T +
Sbjct: 210 TPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPN 269
Query: 476 NATPSE 481
+ +P+E
Sbjct: 270 HPSPAE 275
Score = 32.7 bits (73), Expect = 0.91
Identities = 54/230 (23%), Positives = 83/230 (36%), Gaps = 24/230 (10%)
Query: 282 PMLSAAQEQFGGNPFASLVSNTSSGEGS---QPSRTENRDP-LPNPWAPQTSQSSSASSG 337
P +S + G ASL S G QP P + P AP T+ +S+ ++
Sbjct: 520 PPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTN 579
Query: 338 TASTVGGTTGSTASGTSGQSTTAPNLV-------------PGVGASMFNTPGMQSLLQQI 384
TA+T G G A + +L PG G S +P + + +
Sbjct: 580 TATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGV 639
Query: 385 TENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQT 444
Q M + L A P A + Q + S L GL++
Sbjct: 640 PAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGL----GLES 695
Query: 445 LATE-APGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPG 493
L+ E ++ G L LGS G +G++ S A + S ++ EPG
Sbjct: 696 LSPEFFTSVVQGVLSSL--LGSLGARAGSSESIAAFIQRLSGSSNIFEPG 743
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 44.3 bits (103), Expect = 3e-04
Identities = 120/591 (20%), Positives = 203/591 (34%), Gaps = 128/591 (21%)
Query: 9 GPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQFKEEISKR 68
GP + A G + G ++ + +++ + P+ + P +V Q ++
Sbjct: 3760 GPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQ-QQHPGAL 3818
Query: 69 FKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVT 128
+ VL+ ++L L+Q G GL H ++ Q + Q QQ +
Sbjct: 3819 GPQGPHRQVLMTQSRVLSSPQ-LAQQG--QGLMGHRLVTAQQQQQQQQHQQQGSMAGLSH 3875
Query: 129 TSSTPNSNSTSGSATSNPFG----LGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 184
+ S+S ++ P G L L L + Q Q+Q+Q L +
Sbjct: 3876 LQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQ 3935
Query: 185 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNP----EISHMLNNPDIMRQTLE 240
Q+ + Q L +Q Q QQ Q+ S L +P +Q +
Sbjct: 3936 QQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQ-QQQQQQ 3994
Query: 241 LARNPAMMQEMMRNQDRALSNLESIPGGYNA---LRRMYTDIQEPMLSAAQEQ----FGG 293
+A P M + +++ S PG L + +P +S+ + G
Sbjct: 3995 VALGPGMPAKPLQHF--------SSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQG 4046
Query: 294 NPFA------------SLVSNTSSGEGS----------QPSRTENRDPLPNPWAPQTSQS 331
P A V + SG+ QPS + + PL P Q S
Sbjct: 4047 GPLAIGTTPESMATEPGEVKPSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVS 4106
Query: 332 SSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLM 391
++G GG+ G SG+S ++++ P+L+ S+ + PG +
Sbjct: 4107 LLHTAG-----GGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQPG------------SMT 4149
Query: 392 QNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPG 451
QN+L Q P L MQN + P +LQ QGL
Sbjct: 4150 QNLLG-----------PQQPMLERPMQN----NTGPQPPKPGPVLQSGQGL--------- 4185
Query: 452 LIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQALAGVNPQ 511
PG+G + PT G ++ LQ + NPQ
Sbjct: 4186 ------PGVGIM---------------------PTVGQ--------LRAQLQGVLAKNPQ 4210
Query: 512 LQNPEVRFQQQLEQLSAMGFLNREANLQAL--IATGGDINAAIERLLGSQP 560
L++ + QQQL+ L L + ++ G + ++ LLG QP
Sbjct: 4211 LRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLGCQP 4261
Score = 34.7 bits (78), Expect = 0.24
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 311 PSRTENRDPL------PNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQ------ST 358
PSR ++RDP P P P+ + + + + T+ GG + +G +G+ S
Sbjct: 2454 PSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVPSG 2513
Query: 359 TAPNLV--PGVGASMFNTPGMQSLLQQITENPQL 390
PN V PG GA + M+ Q P L
Sbjct: 2514 QPPNFVRSPGTGAFVGTPSPMRFTFPQAVGEPSL 2547
>gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform a
[Homo sapiens]
Length = 2436
Score = 43.9 bits (102), Expect = 4e-04
Identities = 94/403 (23%), Positives = 144/403 (35%), Gaps = 73/403 (18%)
Query: 193 PFVQSMLSNPDLMRQ----LIMANPQMQQLIQR-----------NPEISHMLNNPDIMRQ 237
P +QS+ PD R L AN + QL++R +P + + + +RQ
Sbjct: 69 PVMQSLC--PDGQRDEFGFLQYANSTVTQLLERLDRVVEEGNLFDPARPSLGSELEALRQ 126
Query: 238 TLE-LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGN-- 294
LE L+ P + + +L+S+ L R T S AQ
Sbjct: 127 HLEALSAGPGTSGSHLDRSTVSSFSLDSVARNPQELWRFLTQNLSLPNSTAQALLAARVD 186
Query: 295 ----------PFASLVSNTSSGEGSQPSRTENRDPL---------PNPWAPQTSQSSSAS 335
P ++L S + +G +P +PL P T S
Sbjct: 187 PPEVYHLLFGPSSALDSQSGLHKGQEPWSRLGGNPLFRMEELLLAPALLEQLTCTPGSGE 246
Query: 336 SGTASTV-----GGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQI-TENPQ 389
G TV G G + SGQ+ G+ A + N + + QQ+ + P
Sbjct: 247 LGRILTVPESQKGALQGYRDAVCSGQAAARARRFSGLSAELRNQLDVAKVSQQLGLDAPN 306
Query: 390 LMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEA 449
+ AP R + L D +Q+ D LSA++ L + QG T
Sbjct: 307 GSDSSPQAPPPRRLQALLGDLLDAQKVLQDVDVLSALA--------LLLPQGACT----- 353
Query: 450 PGLIPGFTPGLGALGSTGGSSGTN-----GSNATPSENTSPTAGTTEPGH-QQFIQQMLQ 503
G TPG A G+ G ++GT G NAT E A P Q +Q
Sbjct: 354 -----GRTPGPPASGAGGAANGTGAGAVMGPNATAEEGAPSAAALATPDTLQGQCSAFVQ 408
Query: 504 ALAGVNPQLQNPEVRFQQQL---EQLSAMGFLNRE-ANLQALI 542
AG+ P L + + +S++GF ++E NL L+
Sbjct: 409 LWAGLQPILCGNNRTIEPEALRRGNMSSLGFTSKEQRNLGLLV 451
>gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform b
[Homo sapiens]
Length = 2466
Score = 43.9 bits (102), Expect = 4e-04
Identities = 94/403 (23%), Positives = 144/403 (35%), Gaps = 73/403 (18%)
Query: 193 PFVQSMLSNPDLMRQ----LIMANPQMQQLIQR-----------NPEISHMLNNPDIMRQ 237
P +QS+ PD R L AN + QL++R +P + + + +RQ
Sbjct: 99 PVMQSLC--PDGQRDEFGFLQYANSTVTQLLERLDRVVEEGNLFDPARPSLGSELEALRQ 156
Query: 238 TLE-LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGN-- 294
LE L+ P + + +L+S+ L R T S AQ
Sbjct: 157 HLEALSAGPGTSGSHLDRSTVSSFSLDSVARNPQELWRFLTQNLSLPNSTAQALLAARVD 216
Query: 295 ----------PFASLVSNTSSGEGSQPSRTENRDPL---------PNPWAPQTSQSSSAS 335
P ++L S + +G +P +PL P T S
Sbjct: 217 PPEVYHLLFGPSSALDSQSGLHKGQEPWSRLGGNPLFRMEELLLAPALLEQLTCTPGSGE 276
Query: 336 SGTASTV-----GGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQI-TENPQ 389
G TV G G + SGQ+ G+ A + N + + QQ+ + P
Sbjct: 277 LGRILTVPESQKGALQGYRDAVCSGQAAARARRFSGLSAELRNQLDVAKVSQQLGLDAPN 336
Query: 390 LMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEA 449
+ AP R + L D +Q+ D LSA++ L + QG T
Sbjct: 337 GSDSSPQAPPPRRLQALLGDLLDAQKVLQDVDVLSALA--------LLLPQGACT----- 383
Query: 450 PGLIPGFTPGLGALGSTGGSSGTN-----GSNATPSENTSPTAGTTEPGH-QQFIQQMLQ 503
G TPG A G+ G ++GT G NAT E A P Q +Q
Sbjct: 384 -----GRTPGPPASGAGGAANGTGAGAVMGPNATAEEGAPSAAALATPDTLQGQCSAFVQ 438
Query: 504 ALAGVNPQLQNPEVRFQQQL---EQLSAMGFLNRE-ANLQALI 542
AG+ P L + + +S++GF ++E NL L+
Sbjct: 439 LWAGLQPILCGNNRTIEPEALRRGNMSSLGFTSKEQRNLGLLV 481
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 28 AAASAEPKIMKVTVKT-PKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILK 86
+ A EP ++V VKT + F V +V++FKE I+ +++ LI+ G++L+
Sbjct: 8 STAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQ 67
Query: 87 DQDTLSQHGIHDGLTVHLVIKTQNRPQDH--SAQQTNTAGSNVT 128
D L ++ + G +HLV + PQ H S + T ++ T
Sbjct: 68 DDKKLQEYNV-GGKVIHLVERAP--PQTHLPSGASSGTGSASAT 108
Score = 32.7 bits (73), Expect = 0.91
Identities = 54/230 (23%), Positives = 83/230 (36%), Gaps = 24/230 (10%)
Query: 282 PMLSAAQEQFGGNPFASLVSNTSSGEGS---QPSRTENRDP-LPNPWAPQTSQSSSASSG 337
P +S + G ASL S G QP P + P AP T+ +S+ ++
Sbjct: 514 PPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTN 573
Query: 338 TASTVGGTTGSTASGTSGQSTTAPNLV-------------PGVGASMFNTPGMQSLLQQI 384
TA+T G G A + +L PG G S +P + + +
Sbjct: 574 TATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGV 633
Query: 385 TENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQT 444
Q M + L A P A + Q + S L GL++
Sbjct: 634 PAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGL----GLES 689
Query: 445 LATE-APGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPG 493
L+ E ++ G L LGS G +G++ S A + S ++ EPG
Sbjct: 690 LSPEFFTSVVQGVLSSL--LGSLGARAGSSESIAAFIQRLSGSSNIFEPG 737
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/180 (23%), Positives = 60/180 (33%), Gaps = 24/180 (13%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA--PNLVPGVGASMFNTPGMQSLLQ- 382
PQT S ASSGT S G + GT G + N V FN P S +
Sbjct: 90 PQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDV 149
Query: 383 -------QITENPQL-----------MQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTL- 423
I P++ +Q +LS R Q P P+ +
Sbjct: 150 HINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVA 209
Query: 424 --SAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSE 481
S S P +A + + + AP P TPG G T ++ +P+E
Sbjct: 210 LSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAE 269
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 28 AAASAEPKIMKVTVKT-PKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILK 86
+ A EP ++V VKT + F V +V++FKE I+ +++ LI+ G++L+
Sbjct: 8 STAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQ 67
Query: 87 DQDTLSQHGIHDGLTVHLVIKTQNRPQDH--SAQQTNTAGSNVT 128
D L ++ + G +HLV + PQ H S + T ++ T
Sbjct: 68 DDKKLQEYNV-GGKVIHLVERAP--PQTHLPSGASSGTGSASAT 108
Score = 32.7 bits (73), Expect = 0.91
Identities = 54/230 (23%), Positives = 83/230 (36%), Gaps = 24/230 (10%)
Query: 282 PMLSAAQEQFGGNPFASLVSNTSSGEGS---QPSRTENRDP-LPNPWAPQTSQSSSASSG 337
P +S + G ASL S G QP P + P AP T+ +S+ ++
Sbjct: 514 PPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTN 573
Query: 338 TASTVGGTTGSTASGTSGQSTTAPNLV-------------PGVGASMFNTPGMQSLLQQI 384
TA+T G G A + +L PG G S +P + + +
Sbjct: 574 TATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGV 633
Query: 385 TENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQT 444
Q M + L A P A + Q + S L GL++
Sbjct: 634 PAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGL----GLES 689
Query: 445 LATE-APGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPG 493
L+ E ++ G L LGS G +G++ S A + S ++ EPG
Sbjct: 690 LSPEFFTSVVQGVLSSL--LGSLGARAGSSESIAAFIQRLSGSSNIFEPG 737
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/180 (23%), Positives = 60/180 (33%), Gaps = 24/180 (13%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA--PNLVPGVGASMFNTPGMQSLLQ- 382
PQT S ASSGT S G + GT G + N V FN P S +
Sbjct: 90 PQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDV 149
Query: 383 -------QITENPQL-----------MQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTL- 423
I P++ +Q +LS R Q P P+ +
Sbjct: 150 HINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVA 209
Query: 424 --SAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSE 481
S S P +A + + + AP P TPG G T ++ +P+E
Sbjct: 210 LSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAE 269
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 28 AAASAEPKIMKVTVKT-PKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILK 86
+ A EP ++V VKT + F V +V++FKE I+ +++ LI+ G++L+
Sbjct: 8 STAVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQ 67
Query: 87 DQDTLSQHGIHDGLTVHLVIKTQNRPQDH--SAQQTNTAGSNVT 128
D L ++ + G +HLV + PQ H S + T ++ T
Sbjct: 68 DDKKLQEYNV-GGKVIHLVERAP--PQTHLPSGASSGTGSASAT 108
Score = 32.7 bits (73), Expect = 0.91
Identities = 54/230 (23%), Positives = 83/230 (36%), Gaps = 24/230 (10%)
Query: 282 PMLSAAQEQFGGNPFASLVSNTSSGEGS---QPSRTENRDP-LPNPWAPQTSQSSSASSG 337
P +S + G ASL S G QP P + P AP T+ +S+ ++
Sbjct: 514 PPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAGTTN 573
Query: 338 TASTVGGTTGSTASGTSGQSTTAPNLV-------------PGVGASMFNTPGMQSLLQQI 384
TA+T G G A + +L PG G S +P + + +
Sbjct: 574 TATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGV 633
Query: 385 TENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQT 444
Q M + L A P A + Q + S L GL++
Sbjct: 634 PAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGL----GLES 689
Query: 445 LATE-APGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPG 493
L+ E ++ G L LGS G +G++ S A + S ++ EPG
Sbjct: 690 LSPEFFTSVVQGVLSSL--LGSLGARAGSSESIAAFIQRLSGSSNIFEPG 737
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/180 (23%), Positives = 60/180 (33%), Gaps = 24/180 (13%)
Query: 326 PQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTA--PNLVPGVGASMFNTPGMQSLLQ- 382
PQT S ASSGT S G + GT G + N V FN P S +
Sbjct: 90 PQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDV 149
Query: 383 -------QITENPQL-----------MQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTL- 423
I P++ +Q +LS R Q P P+ +
Sbjct: 150 HINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVA 209
Query: 424 --SAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSE 481
S S P +A + + + AP P TPG G T ++ +P+E
Sbjct: 210 LSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAE 269
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 41.6 bits (96), Expect = 0.002
Identities = 78/298 (26%), Positives = 113/298 (37%), Gaps = 37/298 (12%)
Query: 116 SAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGG-LGGLAGLSSLGLNTTNFSELQSQ 174
+AQQ +A + V P N PF + G LGG GL L L T N + +Q
Sbjct: 98 TAQQLASAVAGVMPGGPPALNQP----ILIPFNMAGQLGGQQGLV-LTLPTANLTNIQGL 152
Query: 175 MQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEIS-HMLNNPD 233
+ +M ++N S L++ QL + Q QQ Q P + H P
Sbjct: 153 VAAAAAGG--IMTLPLQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQ 210
Query: 234 IMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGG 293
Q+ + P Q+ + P + L++ Q S +Q Q
Sbjct: 211 APSQSQQQPLQPTPPQQPPPASQQP-------PAPTSQLQQAPQPQQHQPHSHSQNQNQP 263
Query: 294 NPFASLVS-----NTSSGEGSQPSRTENRDPLP---NPWAPQTSQSSSASSGTAST---- 341
+P S + S G G PS +PL NP A Q + +++A S AS+
Sbjct: 264 SPTQQSSSPPQKPSQSPGHGL-PSPLTPPNPLQLVNNPLASQAAAAAAAMSSIASSQAFG 322
Query: 342 -----VGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSL-LQQITENPQLMQN 393
+ G TG + GQ L+P G S G Q L +Q IT PQL+ N
Sbjct: 323 NALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSSQAASGTQGLQVQPIT--PQLLTN 378
Score = 33.5 bits (75), Expect = 0.53
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
Query: 429 PRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGA--------LGSTGGSSGTNGSNATPS 480
P Q LL QQ LA+ G++PG P L G GG G P+
Sbjct: 90 PVGPQPLLTAQQ----LASAVAGVMPGGPPALNQPILIPFNMAGQLGGQQGL--VLTLPT 143
Query: 481 ENTSPTAGTTEP----GHQQFIQQMLQALAGVNPQLQNPEVRFQQQLEQ 525
N + G G Q LQA + +N QLQ +++ QQQ +Q
Sbjct: 144 ANLTNIQGLVAAAAAGGIMTLPLQNLQATSSLNSQLQQLQLQLQQQQQQ 192
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 41.2 bits (95), Expect = 0.003
Identities = 59/229 (25%), Positives = 89/229 (38%), Gaps = 34/229 (14%)
Query: 282 PMLSAAQEQFGGN-------PFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSA 334
P +S A GG P A++ +T GS + +P A TS SS
Sbjct: 1614 PRVSGATPAVGGGSTPGEAGPGATVSGSTGVSAGSITA---------SPGASATSSESSK 1664
Query: 335 SSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNM 394
S T +VGG TG+T+S ++T++ + G S+ +T G S +IT +
Sbjct: 1665 SGTTGPSVGGKTGATSS----EATSSEGMSGVTGQSLGSTAGSDS---EITAKTSFTGSS 1717
Query: 395 LSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIP 454
R S + N T A + AL + ++ AT + G
Sbjct: 1718 PPGKLTRPSPGSPGHFSGGTTEWGNVATTGA-AGENTSGALGSTEGSVE--ATTSAG--S 1772
Query: 455 GFTPGLGALGSTG-GSSGTNGS-----NATPSENTSPTAGTTEPGHQQF 497
G T G G TG G++ +G+ ATP S T G + G+ F
Sbjct: 1773 GNTAGTSGTGDTGPGNTAVSGTPVVSPGATPGAPGSSTPGEADIGNTSF 1821
Score = 30.4 bits (67), Expect = 4.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 329 SQSSSASSGTASTVGG----TTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQI 384
S+ + A+S TA T+ G T G+ TSG T+ G NTPG S +
Sbjct: 1857 SKHTDAASATAVTISGSKPGTPGTPGGATSGGKITSGWSSSGTSTGSSNTPGEISKALKG 1916
Query: 385 TENPQLMQNMLSAPY 399
+N +N+ Y
Sbjct: 1917 HKNGSQCRNLFIKAY 1931
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 41.2 bits (95), Expect = 0.003
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 285 SAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGG 344
+AA GG P A+ S +G Q + T R P P P AP +S SS +S G
Sbjct: 10 TAAGGATGGGPQAA---RRSGVQGGQRNSTSARAPPPPPLAPSSSSSSGSS--------G 58
Query: 345 TTGSTASGTSGQSTTAPNLVPGVGA 369
++G SG++GQ T L G A
Sbjct: 59 SSGGGGSGSAGQPTLGSMLAVGSAA 83
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 41.2 bits (95), Expect = 0.003
Identities = 59/229 (25%), Positives = 89/229 (38%), Gaps = 34/229 (14%)
Query: 282 PMLSAAQEQFGGN-------PFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSA 334
P +S A GG P A++ +T GS + +P A TS SS
Sbjct: 1798 PRVSGATPAVGGGSTPGEAGPGATVSGSTGVSAGSITA---------SPGASATSSESSK 1848
Query: 335 SSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNM 394
S T +VGG TG+T+S ++T++ + G S+ +T G S +IT +
Sbjct: 1849 SGTTGPSVGGKTGATSS----EATSSEGMSGVTGQSLGSTAGSDS---EITAKTSFTGSS 1901
Query: 395 LSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIP 454
R S + N T A + AL + ++ AT + G
Sbjct: 1902 PPGKLTRPSPGSPGHFSGGTTEWGNVATTGA-AGENTSGALGSTEGSVE--ATTSAG--S 1956
Query: 455 GFTPGLGALGSTG-GSSGTNGS-----NATPSENTSPTAGTTEPGHQQF 497
G T G G TG G++ +G+ ATP S T G + G+ F
Sbjct: 1957 GNTAGTSGTGDTGPGNTAVSGTPVVSPGATPGAPGSSTPGEADIGNTSF 2005
Score = 30.4 bits (67), Expect = 4.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 329 SQSSSASSGTASTVGG----TTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQI 384
S+ + A+S TA T+ G T G+ TSG T+ G NTPG S +
Sbjct: 2041 SKHTDAASATAVTISGSKPGTPGTPGGATSGGKITSGWSSSGTSTGSSNTPGEISKALKG 2100
Query: 385 TENPQLMQNMLSAPY 399
+N +N+ Y
Sbjct: 2101 HKNGSQCRNLFIKAY 2115
>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 96 IHDGLTVHLVIKTQNRPQDHSAQQTNTAGSN 126
I T+HLV++ + + + T N
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 96 IHDGLTVHLVIKTQNRPQDHSAQQTNTAGSN 126
I T+HLV++ + + + T N
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKSYTTPKKN 91
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 41.2 bits (95), Expect = 0.003
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + +DQ LIFAGK L+D TLS +
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYN 212
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 213 IQKESTLHLVLRLRGGMQ 230
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 61 IQKESTLHLVLRLRGGMQ 78
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 137 IQKESTLHLVLRLRGGMQ 154
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 289 IQKESTLHLVLRLRGGMQ 306
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 365 IQKESTLHLVLRLRGGMQ 382
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 441 IQKESTLHLVLRLRGGMQ 458
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 517 IQKESTLHLVLRLRGGMQ 534
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 96 IHDGLTVHLVIKTQNRPQ 113
I T+HLV++ + Q
Sbjct: 593 IQKESTLHLVLRLRGGMQ 610
Score = 40.0 bits (92), Expect = 0.006
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 37 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHG 95
M++ VKT K V + +++ K +I + DQ LIFAGK L+D TLS +
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 96 IHDGLTVHLVIK 107
I T+HLV++
Sbjct: 669 IQKESTLHLVLR 680
>gi|60498992 forkhead box P4 isoform 3 [Homo sapiens]
Length = 678
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 325 APQTSQSSSASSGTAS-TVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQ 383
AP + SG A + GG TG+TASGT + TT + + + Q LQ
Sbjct: 13 APSGQNGVGSLSGQADGSSGGATGTTASGTGREVTTGADSNGEMSPAELLHFQQQQALQV 72
Query: 384 ITENPQLMQNMLSAPYMRSMMQSLS--QNP----DLAAQMQNPDTLSAMSNPRAMQALLQ 437
+ + LS+P QS S Q P ++ QM P + + +P +QALLQ
Sbjct: 73 ARQFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLTPQQMQQILSPPQLQALLQ 132
Query: 438 IQQGL 442
QQ L
Sbjct: 133 QQQAL 137
>gi|29789367 forkhead box P4 isoform 2 [Homo sapiens]
Length = 667
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 325 APQTSQSSSASSGTAS-TVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQ 383
AP + SG A + GG TG+TASGT + TT + + + Q LQ
Sbjct: 13 APSGQNGVGSLSGQADGSSGGATGTTASGTGREVTTGADSNGEMSPAELLHFQQQQALQV 72
Query: 384 ITENPQLMQNMLSAPYMRSMMQSLS--QNP----DLAAQMQNPDTLSAMSNPRAMQALLQ 437
+ + LS+P QS S Q P ++ QM P + + +P +QALLQ
Sbjct: 73 ARQFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLTPQQMQQILSPPQLQALLQ 132
Query: 438 IQQGL 442
QQ L
Sbjct: 133 QQQAL 137
>gi|60498989 forkhead box P4 isoform 1 [Homo sapiens]
Length = 680
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 325 APQTSQSSSASSGTAS-TVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQ 383
AP + SG A + GG TG+TASGT + TT + + + Q LQ
Sbjct: 13 APSGQNGVGSLSGQADGSSGGATGTTASGTGREVTTGADSNGEMSPAELLHFQQQQALQV 72
Query: 384 ITENPQLMQNMLSAPYMRSMMQSLS--QNP----DLAAQMQNPDTLSAMSNPRAMQALLQ 437
+ + LS+P QS S Q P ++ QM P + + +P +QALLQ
Sbjct: 73 ARQFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLTPQQMQQILSPPQLQALLQ 132
Query: 438 IQQGL 442
QQ L
Sbjct: 133 QQQAL 137
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 40.4 bits (93), Expect = 0.004
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 306 GEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQ------STT 359
G PSR+ +RD P+ A Q S G S G G + Q +T
Sbjct: 2294 GSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPST 2353
Query: 360 APNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQ 409
A G G + +PG Q Q +T+ L +N S P S + L+Q
Sbjct: 2354 ASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASKGLNQ 2403
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 40.4 bits (93), Expect = 0.004
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 306 GEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQ------STT 359
G PSR+ +RD P+ A Q S G S G G + Q +T
Sbjct: 2294 GSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPST 2353
Query: 360 APNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQ 409
A G G + +PG Q Q +T+ L +N S P S + L+Q
Sbjct: 2354 ASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASKGLNQ 2403
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.123 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,546,265
Number of Sequences: 37866
Number of extensions: 1019359
Number of successful extensions: 9375
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 294
Number of HSP's that attempted gapping in prelim test: 7147
Number of HSP's gapped (non-prelim): 2088
length of query: 561
length of database: 18,247,518
effective HSP length: 107
effective length of query: 454
effective length of database: 14,195,856
effective search space: 6444918624
effective search space used: 6444918624
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.