Search of human proteins with 110611231

Search of human proteins with 110611231

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110611231 chloride channel accessory 1 precursor [Homo
sapiens]
         (914 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110611231 chloride channel accessory 1 precursor [Homo sapiens]   1838   0.0  
gi|150036262 chloride channel accessory 4 [Homo sapiens]             1109   0.0  
gi|5729769 chloride channel accessory 2 precursor [Homo sapiens]      757   0.0  
gi|218505703 von Willebrand factor A domain containing 3A [Homo ...    40   0.013
gi|156616290 collagen type VI alpha 6 [Homo sapiens]                   34   0.54 
gi|157649069 ATPase, aminophospholipid transporter (APLT), class...    33   1.6  
gi|17978471 ATPase, aminophospholipid transporter (APLT), class ...    33   1.6  
gi|22325364 ubiquitin associated protein 2 [Homo sapiens]              32   2.1  
gi|124028519 hypothetical protein LOC158401 isoform 2 [Homo sapi...    32   2.7  
gi|124028515 hypothetical protein LOC158401 isoform 1 [Homo sapi...    32   2.7  
gi|197927448 WD repeat domain 6 protein [Homo sapiens]                 32   3.5  
gi|45594240 limbic system-associated membrane protein [Homo sapi...    31   4.6  
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]           30   7.9  
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]           30   7.9  
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]           30   7.9  
gi|148539860 protein tyrosine phosphatase, receptor type, T isof...    30   7.9  
gi|117168245 ATPase, aminophospholipid transporter-like, Class I...    30   7.9  
gi|148612838 hypothetical protein LOC158358 [Homo sapiens]             30   7.9  
gi|9256610 protocadherin beta 15 precursor [Homo sapiens]              30   7.9  

>gi|110611231 chloride channel accessory 1 precursor [Homo sapiens]
          Length = 914

 Score = 1838 bits (4761), Expect = 0.0
 Identities = 914/914 (100%), Positives = 914/914 (100%)

Query: 1   MGPFKSSVFILILHLLEGALSNSLIQLNNNGYEGIVVAIDPNVPEDETLIQQIKDMVTQA 60
           MGPFKSSVFILILHLLEGALSNSLIQLNNNGYEGIVVAIDPNVPEDETLIQQIKDMVTQA
Sbjct: 1   MGPFKSSVFILILHLLEGALSNSLIQLNNNGYEGIVVAIDPNVPEDETLIQQIKDMVTQA 60

Query: 61  SLYLFEATGKRFYFKNVAILIPETWKTKADYVRPKLETYKNADVLVAESTPPGNDEPYTE 120
           SLYLFEATGKRFYFKNVAILIPETWKTKADYVRPKLETYKNADVLVAESTPPGNDEPYTE
Sbjct: 61  SLYLFEATGKRFYFKNVAILIPETWKTKADYVRPKLETYKNADVLVAESTPPGNDEPYTE 120

Query: 121 QMGNCGEKGERIHLTPDFIAGKKLAEYGPQGRAFVHEWAHLRWGVFDEYNNDEKFYLSNG 180
           QMGNCGEKGERIHLTPDFIAGKKLAEYGPQGRAFVHEWAHLRWGVFDEYNNDEKFYLSNG
Sbjct: 121 QMGNCGEKGERIHLTPDFIAGKKLAEYGPQGRAFVHEWAHLRWGVFDEYNNDEKFYLSNG 180

Query: 181 RIQAVRCSAGITGTNVVKKCQGGSCYTKRCTFNKVTGLYEKGCEFVLQSRQTEKASIMFA 240
           RIQAVRCSAGITGTNVVKKCQGGSCYTKRCTFNKVTGLYEKGCEFVLQSRQTEKASIMFA
Sbjct: 181 RIQAVRCSAGITGTNVVKKCQGGSCYTKRCTFNKVTGLYEKGCEFVLQSRQTEKASIMFA 240

Query: 241 QHVDSIVEFCTEQNHNKEAPNKQNQKCNLRSTWEVIRDSEDFKKTTPMTTQPPNPTFSLL 300
           QHVDSIVEFCTEQNHNKEAPNKQNQKCNLRSTWEVIRDSEDFKKTTPMTTQPPNPTFSLL
Sbjct: 241 QHVDSIVEFCTEQNHNKEAPNKQNQKCNLRSTWEVIRDSEDFKKTTPMTTQPPNPTFSLL 300

Query: 301 QIGQRIVCLVLDKSGSMATGNRLNRLNQAGQLFLLQTVELGSWVGMVTFDSAAHVQNELI 360
           QIGQRIVCLVLDKSGSMATGNRLNRLNQAGQLFLLQTVELGSWVGMVTFDSAAHVQNELI
Sbjct: 301 QIGQRIVCLVLDKSGSMATGNRLNRLNQAGQLFLLQTVELGSWVGMVTFDSAAHVQNELI 360

Query: 361 QINSGSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKYPTDGSEIVLLTDGEDNTISG 420
           QINSGSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKYPTDGSEIVLLTDGEDNTISG
Sbjct: 361 QINSGSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKYPTDGSEIVLLTDGEDNTISG 420

Query: 421 CFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQVQNNGLIDAFGALSSGNG 480
           CFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQVQNNGLIDAFGALSSGNG
Sbjct: 421 CFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQVQNNGLIDAFGALSSGNG 480

Query: 481 AVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGKDTLFLITWTMQPPQILLWDPSGQKQG 540
           AVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGKDTLFLITWTMQPPQILLWDPSGQKQG
Sbjct: 481 AVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGKDTLFLITWTMQPPQILLWDPSGQKQG 540

Query: 541 GFVVDKNTKMAYLQIPGIAKVGTWKYSLQASSQTLTLTVTSRASNATLPPITVTSKTNKD 600
           GFVVDKNTKMAYLQIPGIAKVGTWKYSLQASSQTLTLTVTSRASNATLPPITVTSKTNKD
Sbjct: 541 GFVVDKNTKMAYLQIPGIAKVGTWKYSLQASSQTLTLTVTSRASNATLPPITVTSKTNKD 600

Query: 601 TSKFPSPLVVYANIRQGASPILRASVTALIESVNGKTVTLELLDNGAGADATKDDGVYSR 660
           TSKFPSPLVVYANIRQGASPILRASVTALIESVNGKTVTLELLDNGAGADATKDDGVYSR
Sbjct: 601 TSKFPSPLVVYANIRQGASPILRASVTALIESVNGKTVTLELLDNGAGADATKDDGVYSR 660

Query: 661 YFTTYDTNGRYSVKVRALGGVNAARRRVIPQQSGALYIPGWIENDEIQWNPPRPEINKDD 720
           YFTTYDTNGRYSVKVRALGGVNAARRRVIPQQSGALYIPGWIENDEIQWNPPRPEINKDD
Sbjct: 661 YFTTYDTNGRYSVKVRALGGVNAARRRVIPQQSGALYIPGWIENDEIQWNPPRPEINKDD 720

Query: 721 VQHKQVCFSRTSSGGSFVASDVPNAPIPDLFPPGQITDLKAEIHGGSLINLTWTAPGDDY 780
           VQHKQVCFSRTSSGGSFVASDVPNAPIPDLFPPGQITDLKAEIHGGSLINLTWTAPGDDY
Sbjct: 721 VQHKQVCFSRTSSGGSFVASDVPNAPIPDLFPPGQITDLKAEIHGGSLINLTWTAPGDDY 780

Query: 781 DHGTAHKYIIRISTSILDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDL 840
           DHGTAHKYIIRISTSILDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDL
Sbjct: 781 DHGTAHKYIIRISTSILDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDL 840

Query: 841 FIAIQAVDKVDLKSEISNIARVSLFIPPQTPPETPSPDETSAPCPNIHINSTIPGIHILK 900
           FIAIQAVDKVDLKSEISNIARVSLFIPPQTPPETPSPDETSAPCPNIHINSTIPGIHILK
Sbjct: 841 FIAIQAVDKVDLKSEISNIARVSLFIPPQTPPETPSPDETSAPCPNIHINSTIPGIHILK 900

Query: 901 IMWKWIGELQLSIA 914
           IMWKWIGELQLSIA
Sbjct: 901 IMWKWIGELQLSIA 914


>gi|150036262 chloride channel accessory 4 [Homo sapiens]
          Length = 919

 Score = 1109 bits (2869), Expect = 0.0
 Identities = 564/914 (61%), Positives = 686/914 (75%), Gaps = 11/914 (1%)

Query: 1   MGPFKSSVFILILHLLEGALSNSLIQLNNNGYEGIVVAIDPNVPEDETLIQQIKDMVTQA 60
           MG F+  VF+L+L LL  + + S I+LNNNG+E IV+ IDP+VPEDE +I+QI+DMVT A
Sbjct: 1   MGLFRGFVFLLVLCLLHQS-NTSFIKLNNNGFEDIVIVIDPSVPEDEKIIEQIEDMVTTA 59

Query: 61  SLYLFEATGKRFYFKNVAILIPETWKTKADYVRPKLETYKNADVLVAESTPPGNDEPYTE 120
           S YLFEAT KRF+FKNV+ILIPE WK    Y RPK E +K+ADV+VA  T PG DEPYT+
Sbjct: 60  STYLFEATEKRFFFKNVSILIPENWKENPQYKRPKHENHKHADVIVAPPTLPGRDEPYTK 119

Query: 121 QMGNCGEKGERIHLTPDFIAGKKLAEYGPQGRAFVHEWAHLRWGVFDEYNNDEKFYLSNG 180
           Q   CGEKGE IH TPD + GKK  EYGP G+ FVHEWAHLRWGVFDEYN D+ FY +  
Sbjct: 120 QFTECGEKGEYIHFTPDLLLGKKQNEYGPPGKLFVHEWAHLRWGVFDEYNEDQPFYRAKS 179

Query: 181 R-IQAVRCSAGITGTNVVKKCQGGSCYTKRCTFNKVTGLYEKGCEFVLQSRQTEKASIMF 239
           + I+A RCSAGI+G N V KCQGGSC ++ C  +  T LY K C+F     QTEKASIMF
Sbjct: 180 KKIEATRCSAGISGRNRVYKCQGGSCLSRACRIDSTTKLYGKDCQFFPDKVQTEKASIMF 239

Query: 240 AQHVDSIVEFCTEQNHNKEAPNKQNQKCNLRSTWEVIRDSEDFKKTTPMTTQPPNPTFSL 299
            Q +DS+VEFC E+ HN+EAP+ QN KCN RSTWEVI +SEDFK T PM T PP P FSL
Sbjct: 240 MQSIDSVVEFCNEKTHNQEAPSLQNIKCNFRSTWEVISNSEDFKNTIPMVTPPPPPVFSL 299

Query: 300 LQIGQRIVCLVLDKSGSMATGNRLNRLNQAGQLFLLQTVELGSWVGMVTFDSAAHVQNEL 359
           L+I QRIVCLVLDKSGSM   +RLNR+NQA + FLLQTVE GSWVGMV FDS A + N+L
Sbjct: 300 LKISQRIVCLVLDKSGSMGGKDRLNRMNQAAKHFLLQTVENGSWVGMVHFDSTATIVNKL 359

Query: 360 IQINSGSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKY-PTDGSEIVLLTDGEDNTI 418
           IQI S  +R+TL   LP    GGTSICSG++ AF VI + +   DGSE++LLTDGEDNT 
Sbjct: 360 IQIKSSDERNTLMAGLPTYPLGGTSICSGIKYAFQVIGELHSQLDGSEVLLLTDGEDNTA 419

Query: 419 SGCFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQVQNNGLIDAFGALSSG 478
           S C +EVKQSGAI+H +ALG +A + + E+SK+TGG   Y SD+ QNNGLIDAFGAL+SG
Sbjct: 420 SSCIDEVKQSGAIVHFIALGRAADEAVIEMSKITGGSHFYVSDEAQNNGLIDAFGALTSG 479

Query: 479 NGAVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGKDTLFLITWTMQPPQILLWDPSGQK 538
           N  +SQ+S+QLESKGLTL ++ WMN TVI+DSTVGKDT FLITW   PP I LWDPSG  
Sbjct: 480 NTDLSQKSLQLESKGLTLNSNAWMNDTVIIDSTVGKDTFFLITWNSLPPSISLWDPSGTI 539

Query: 539 QGGFVVDKNTKMAYLQIPGIAKVGTWKYSLQASS--QTLTLTVTSRASNATLPPITVTSK 596
              F VD  +KMAYL IPG AKVGTW Y+LQA +  +TLT+TVTSRA+N+++PPITV +K
Sbjct: 540 MENFTVDATSKMAYLSIPGTAKVGTWAYNLQAKANPETLTITVTSRAANSSVPPITVNAK 599

Query: 597 TNKDTSKFPSPLVVYANIRQGASPILRASVTALIESVNGKTVTLELLDNGAGADATKDDG 656
            NKD + FPSP++VYA I QG  P+L A+VTA IES NG T  LELLDNGAGAD+ K+DG
Sbjct: 600 MNKDVNSFPSPMIVYAEILQGYVPVLGANVTAFIESQNGHTEVLELLDNGAGADSFKNDG 659

Query: 657 VYSRYFTTYDTNGRYSVKVRALGGVNAARRRVIPQQSGALYIPGWIENDEIQWNPPRPEI 716
           VYSRYFT Y  NGRYS+KVRA GG N AR ++ P  + A YIPGW+ N EI+ NPPRPEI
Sbjct: 660 VYSRYFTAYTENGRYSLKVRAHGGANTARLKLRPPLNRAAYIPGWVVNGEIEANPPRPEI 719

Query: 717 NKDDVQHKQVCFSRTSSGGSFVASDVPNAPIPDLFPPGQITDLKAEIHGGSLINLTWTAP 776
           + +D Q     FSRT+SGG+FV S VP+ P+PD +PP QITDL A +H   +I LTWTAP
Sbjct: 720 D-EDTQTTLEDFSRTASGGAFVVSQVPSLPLPDQYPPSQITDLDATVHEDKII-LTWTAP 777

Query: 777 GDDYDHGTAHKYIIRISTSILDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFEN 836
           GD++D G   +YIIRIS SILDLRD F+++LQVNTT L PKEANS+E F FKPENI+ EN
Sbjct: 778 GDNFDVGKVQRYIIRISASILDLRDSFDDALQVNTTDLSPKEANSKESFAFKPENISEEN 837

Query: 837 GTDLFIAIQAVDKVDLKSEISNIARVSLFIPPQTPPE-TPSPDETSAPCPNIHINSTIPG 895
            T +FIAI+++DK +L S++SNIA+V+LFIP   P +  P+P  T  P P+   NS   G
Sbjct: 838 ATHIFIAIKSIDKSNLTSKVSNIAQVTLFIPQANPDDIDPTPTPTPTPTPDKSHNS---G 894

Query: 896 IHILKIMWKWIGEL 909
           ++I  ++   IG +
Sbjct: 895 VNISTLVLSVIGSV 908


>gi|5729769 chloride channel accessory 2 precursor [Homo sapiens]
          Length = 943

 Score =  757 bits (1954), Expect = 0.0
 Identities = 408/898 (45%), Positives = 569/898 (63%), Gaps = 38/898 (4%)

Query: 2   GPFKSSVFILILHLLEGALS--NSLIQLNNNGYEGIVVAIDPNVPEDETLIQQIKDMVTQ 59
           GP  +  F+ +L  L   L    + +QL +NGY G+++AI+P VPE++ LI  IK+M+T+
Sbjct: 8   GPICNLKFVTLLVALSSELPFLGAGVQLQDNGYNGLLIAINPQVPENQNLISNIKEMITE 67

Query: 60  ASLYLFEATGKRFYFKNVAILIPETWKTKADYVRPKLETYKNADVLVAESTPPGNDEPYT 119
           AS YLF AT +R +F+N+ ILIP TWK   +  + K E+Y+ A+V+V +      D+PYT
Sbjct: 68  ASFYLFNATKRRVFFRNIKILIPATWKANNNS-KIKQESYEKANVIVTDWYGAHGDDPYT 126

Query: 120 EQMGNCGEKGERIHLTPDFIAGKKL-AEYGPQGRAFVHEWAHLRWGVFDEYNNDEKFYLS 178
            Q   CG++G+ IH TP+F+    L A YG +GR FVHEWAHLRWGVFDEYNND+ FY++
Sbjct: 127 LQYRGCGKEGKYIHFTPNFLLNDNLTAGYGSRGRVFVHEWAHLRWGVFDEYNNDKPFYIN 186

Query: 179 N-GRIQAVRCSAGITGTNVVKKCQGGSCYTKRCTFNKVTGLYEKGCEFVLQSRQTEKASI 237
              +I+  RCS+ ITG  V   C+ G C  + C  +K   L+++GC F+  S Q   ASI
Sbjct: 187 GQNQIKVTRCSSDITGIFV---CEKGPCPQENCIISK---LFKEGCTFIYNSTQNATASI 240

Query: 238 MFAQHVDSIVEFCTEQNHNKEAPNKQNQKCNLRSTWEVIRDSEDFKKTTPM--TTQPPNP 295
           MF Q + S+VEFC    HN+EAPN QNQ C+LRS W+VI DS DF  + PM  T  PP P
Sbjct: 241 MFMQSLSSVVEFCNASTHNQEAPNLQNQMCSLRSAWDVITDSADFHHSFPMNGTELPPPP 300

Query: 296 TFSLLQIGQRIVCLVLDKSGSMATGNRLNRLNQAGQLFLLQTVELGSWVGMVTFDSAAHV 355
           TFSL+Q G ++VCLVLD S  MA  +RL +L QA + +L+Q VE+ ++VG+ +FDS   +
Sbjct: 301 TFSLVQAGDKVVCLVLDVSSKMAEADRLLQLQQAAEFYLMQIVEIHTFVGIASFDSKGEI 360

Query: 356 QNELIQINSGSDRDTLAKRLPAAASGGT--SICSGLRSAFTVIRK-KYPTDGSEIVLLTD 412
           + +L QINS  DR  L   LP   S  T  SICSGL+  F V+ K      GS ++L+T 
Sbjct: 361 RAQLHQINSNDDRKLLVSYLPTTVSAKTDISICSGLKKGFEVVEKLNGKAYGSVMILVTS 420

Query: 413 GEDNTISGCFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQVQNNGLIDAF 472
           G+D  +  C   V  SG+ IH++ALG SAA  LEELS++TGGL+ +  D   +N +IDAF
Sbjct: 421 GDDKLLGNCLPTVLSSGSTIHSIALGSSAAPNLEELSRLTGGLKFFVPDISNSNSMIDAF 480

Query: 473 GALSSGNGAVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGKDTLFLITWTMQ-PPQILL 531
             +SSG G + Q+ IQLES G  ++    +  TV VD+TVG DT+FL+TW    PP+I+L
Sbjct: 481 SRISSGTGDIFQQHIQLESTGENVKPHHQLKNTVTVDNTVGNDTMFLVTWQASGPPEIIL 540

Query: 532 WDPSGQKQ--GGFVVDKNTKMAYLQIPGIAKVGTWKYSLQA---SSQTLTLTVTSRASNA 586
           +DP G+K     F+ +   + A L IPG AK G W Y+L     S Q L +TVTSRASN+
Sbjct: 541 FDPDGRKYYTNNFITNLTFRTASLWIPGTAKPGHWTYTLNNTHHSLQALKVTVTSRASNS 600

Query: 587 TLPPITVTSKTNKDTSKFPSPLVVYANIRQGASPILRASVTALIESVNGKTVTLELLDNG 646
            +PP TV +   +D+  FP P+++YAN++QG  PIL A+VTA +E   G  VTL LLD+G
Sbjct: 601 AVPPATVEAFVERDSLHFPHPVMIYANVKQGFYPILNATVTATVEPETGDPVTLRLLDDG 660

Query: 647 AGADATKDDGVYSRYFTTYDTNGRYSVKVRALGGVNAARRRVIPQQSGALYIPGWIENDE 706
           AGAD  K+DG+YSRYF ++  NGRYS+KV      + +        S A+Y+PG+  N  
Sbjct: 661 AGADVIKNDGIYSRYFFSFAANGRYSLKVHVNHSPSISTPAHSIPGSHAMYVPGYTANGN 720

Query: 707 IQWNPPRPEINKDDVQHKQVCFSRTSSGGSFVASDVPNAPIPDLFPPGQITDLKAEIHGG 766
           IQ N PR  + +++ + K   FSR SSGGSF    VP  P PD+FPP +I DL+A +   
Sbjct: 721 IQMNAPRKSVGRNEEERKW-GFSRVSSGGSFSVLGVPAGPHPDVFPPCKIIDLEA-VKVE 778

Query: 767 SLINLTWTAPGDDYDHGTAHKYIIRISTSILDLRDKFNESLQVNTTALIPKEANSEEVFL 826
             + L+WTAPG+D+D G A  Y IR+S S+ +++D FN ++ VNT+   P++A   E+F 
Sbjct: 779 EELTLSWTAPGEDFDQGQATSYEIRMSKSLQNIQDDFNNAILVNTSKRNPQQAGIREIFT 838

Query: 827 FKPENITFENGTD------------LFIAIQAVDKVDLKSEISNIARVSLFIPPQTPP 872
           F P+  T  NG +            +++AI+A+D+  L+S +SNIA+  LFIPP + P
Sbjct: 839 FSPQIST--NGPEHQPNGETHESHRIYVAIRAMDRNSLQSAVSNIAQAPLFIPPNSDP 894


>gi|218505703 von Willebrand factor A domain containing 3A [Homo
            sapiens]
          Length = 1184

 Score = 39.7 bits (91), Expect = 0.013
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 18/158 (11%)

Query: 307  VCLVLDKSGSMATGNRLNRLNQAGQLFLLQTVE--LGSWVGMVTFDSAAHVQNELIQINS 364
            VC++LD SGSM  G  L ++     L + + +     S+  +   +S    Q+ L++   
Sbjct: 960  VCILLDTSGSM--GPYLQQVKTELVLLIWEQLRKCCDSFNLLSFAESFQSWQDTLVETTD 1017

Query: 365  GSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKYPTDGSEIVLLTDGE-DNTISGCFN 423
             +  + +       A G TSI   L  AF+        D   + LLTDG+ D + S   N
Sbjct: 1018 AACHEAMQWVTHLQAQGSTSILQALLKAFSF------HDLEGLYLLTDGKPDTSCSLVLN 1071

Query: 424  EV----KQSGAIIHTVALGPS---AAQELEELSKMTGG 454
            EV    ++    +HT++L  S   A + L +L+  TGG
Sbjct: 1072 EVQKLREKRDVKVHTISLNCSDRAAVEFLRKLASFTGG 1109


>gi|156616290 collagen type VI alpha 6 [Homo sapiens]
          Length = 2263

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 13/114 (11%)

Query: 344 VGMVTFDSAAHVQNELIQINSGSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKY-PT 402
           +G+V F     +  E  Q+N    +  ++  +   A  G +  +G  SA + + + + PT
Sbjct: 661 IGVVQFSD---INKEEFQLNRFMSQSDISNAIDQMAHIGQTTLTG--SALSFVSQYFSPT 715

Query: 403 DGSE------IVLLTDGE-DNTISGCFNEVKQSGAIIHTVALGPSAAQELEELS 449
            G+       ++L+TDGE  + +      ++Q G II++V +  S   +LEE+S
Sbjct: 716 KGARPNIRKFLILITDGEAQDIVKEPAVVLRQEGVIIYSVGVFGSNVTQLEEIS 769


>gi|157649069 ATPase, aminophospholipid transporter (APLT), class I,
           type 8A, member 1 isoform b [Homo sapiens]
          Length = 1149

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 440 SAAQELEELSKMTGGLQTYASDQVQNNGLIDAFGALS-SGNGAVSQRSIQLESKGLTLQN 498
           S  ++++ L +++G ++     +  N  L D  G +   G+G V   + Q+  +G  L+N
Sbjct: 204 SDIKDVDSLMRISGRIEC----ESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGAQLRN 259

Query: 499 SQWMNGTVIVDSTVGKDTLFLITWTMQP 526
           +QW++G V+     G DT  +   T  P
Sbjct: 260 TQWVHGIVVY---TGHDTKLMQNSTSPP 284


>gi|17978471 ATPase, aminophospholipid transporter (APLT), class I,
           type 8A, member 1 isoform a [Homo sapiens]
          Length = 1164

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 440 SAAQELEELSKMTGGLQTYASDQVQNNGLIDAFGALS-SGNGAVSQRSIQLESKGLTLQN 498
           S  ++++ L +++G ++     +  N  L D  G +   G+G V   + Q+  +G  L+N
Sbjct: 204 SDIKDVDSLMRISGRIEC----ESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGAQLRN 259

Query: 499 SQWMNGTVIVDSTVGKDTLFLITWTMQP 526
           +QW++G V+     G DT  +   T  P
Sbjct: 260 TQWVHGIVVY---TGHDTKLMQNSTSPP 284


>gi|22325364 ubiquitin associated protein 2 [Homo sapiens]
          Length = 1119

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 2/122 (1%)

Query: 286 TPMTTQPPNPTFSLLQIGQRIVCLVLDKSGSMATGNRLNR-LNQAGQLFLLQTVELGSWV 344
           TP TT PP+   S+  +     C  L  S S  TG+  +  L+Q           L +  
Sbjct: 657 TPKTTGPPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHA 716

Query: 345 GMVTFDSAAHVQNELIQIN-SGSDRDTLAKRLPAAASGGTSICSGLRSAFTVIRKKYPTD 403
            + +  S  H   E    + S +   T A  + ++AS G S+ S + +A ++     P  
Sbjct: 717 ALSSSTSHTHASVESASSHQSSATFSTAATSVSSSASSGASLSSSMNTANSLCLGGTPAS 776

Query: 404 GS 405
            S
Sbjct: 777 AS 778


>gi|124028519 hypothetical protein LOC158401 isoform 2 [Homo
           sapiens]
          Length = 1405

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 29/170 (17%)

Query: 357 NELIQINSGSDRDTLAKRLPAAASGGTSICS--------------GLRSAFTVIRKKYPT 402
           N +IQ    +D   L    P+  S  +SI                 L S F ++R KY T
Sbjct: 435 NRIIQKKENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLDLLSDFIMLRNKYKT 494

Query: 403 DGSEIVLLTDGEDNTISGCFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQ 462
             S+  +    E +    C   +++   I+H         + LEE+++  G   T +  +
Sbjct: 495 CTSKTEVTNSDEKHDKEACSLTLQEESPIVH-------INKTLEEINQERG---TDSVIE 544

Query: 463 VQ-NNGLIDAFGALSSGNGAVSQRSIQLESKGLTLQNSQWMNGTVIVDST 511
           +Q ++    AF  L +    + +  + L     TL  + W   TVI D T
Sbjct: 545 IQASDSQCQAFCLLEAAASPILKNLVSL----CTLPTANWKFATVIFDQT 590


>gi|124028515 hypothetical protein LOC158401 isoform 1 [Homo
           sapiens]
          Length = 1444

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 29/170 (17%)

Query: 357 NELIQINSGSDRDTLAKRLPAAASGGTSICS--------------GLRSAFTVIRKKYPT 402
           N +IQ    +D   L    P+  S  +SI                 L S F ++R KY T
Sbjct: 474 NRIIQKKENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLDLLSDFIMLRNKYKT 533

Query: 403 DGSEIVLLTDGEDNTISGCFNEVKQSGAIIHTVALGPSAAQELEELSKMTGGLQTYASDQ 462
             S+  +    E +    C   +++   I+H         + LEE+++  G   T +  +
Sbjct: 534 CTSKTEVTNSDEKHDKEACSLTLQEESPIVH-------INKTLEEINQERG---TDSVIE 583

Query: 463 VQ-NNGLIDAFGALSSGNGAVSQRSIQLESKGLTLQNSQWMNGTVIVDST 511
           +Q ++    AF  L +    + +  + L     TL  + W   TVI D T
Sbjct: 584 IQASDSQCQAFCLLEAAASPILKNLVSL----CTLPTANWKFATVIFDQT 629


>gi|197927448 WD repeat domain 6 protein [Homo sapiens]
          Length = 1151

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 7/133 (5%)

Query: 609 VVYANIRQGASPILRASVTALIESVNGKTVTLELLDNGAGADATKDDGVYSRYFTTYDTN 668
           VV +    G +        + + S++GK     +  +G     T  DG Y + F   D  
Sbjct: 572 VVGSGSSGGGNAFTGLGPVSTLPSLHGKQGVTSVTCHGGYVYTTGRDGAYYQLFVR-DGQ 630

Query: 669 GRYSVKVRALGGVN-AARRRVIPQQSGALYIPGWIENDEIQWNPPRPE---INKDDVQHK 724
            +  ++ ++  G+N  A  R++P   G++ I G+  N+ + WNP   E   I      H+
Sbjct: 631 LQPVLRQKSCRGMNWLAGLRIVPD--GSMVILGFHANEFVVWNPRSHEKLHIVNCGGGHR 688

Query: 725 QVCFSRTSSGGSF 737
              FS T +  +F
Sbjct: 689 SWAFSDTEAAMAF 701


>gi|45594240 limbic system-associated membrane protein [Homo
           sapiens]
          Length = 338

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 525 QPPQILLW---DPSGQKQGGFVVDKNTKMAYLQIPGIAKVGTWKYSLQASSQTLTLTVTS 581
           +P  ++ W    P+G++  G       +  YL+I GI +  + KY  +A+++  +  V  
Sbjct: 158 RPEPVITWRHLTPTGREFEG-------EEEYLEILGITREQSGKYECKAANEVSSADVKQ 210

Query: 582 RASNATLPPITVTSKTNKDTS 602
                  PP    SK+N+ T+
Sbjct: 211 VKVTVNYPPTITESKSNEATT 231


>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 31/151 (20%), Positives = 51/151 (33%), Gaps = 24/151 (15%)

Query: 743 PNAPIP------DLFPPGQITDLKAEIHGGSLINLTWTAPGDDYDHGTAHKYIIRISTSI 796
           P+AP+P      D+  P + + LK          L    PG  Y   +   + + + T  
Sbjct: 23  PSAPLPLGCGFPDMAHPSETSPLKGASENSKRDRLNPEFPGTPYPEPSKLPHTVSLETFP 82

Query: 797 LDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDLFIAIQAVDKVDLKSEI 856
           LD  +  N  L+       P+   ++ +     E++                    K+ +
Sbjct: 83  LDFTEPLNPDLRETPHPESPETPKADSLTTSISESLDMP-----------------KTNL 125

Query: 857 SNIAR-VSLFIPPQTPPETPSPDETSAPCPN 886
           S +A   S   P   P E P P     P PN
Sbjct: 126 SKMAHPESSETPTPGPTEMPHPGSPETPKPN 156


>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 31/151 (20%), Positives = 51/151 (33%), Gaps = 24/151 (15%)

Query: 743 PNAPIP------DLFPPGQITDLKAEIHGGSLINLTWTAPGDDYDHGTAHKYIIRISTSI 796
           P+AP+P      D+  P + + LK          L    PG  Y   +   + + + T  
Sbjct: 23  PSAPLPLGCGFPDMAHPSETSPLKGASENSKRDRLNPEFPGTPYPEPSKLPHTVSLETFP 82

Query: 797 LDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDLFIAIQAVDKVDLKSEI 856
           LD  +  N  L+       P+   ++ +     E++                    K+ +
Sbjct: 83  LDFTEPLNPDLRETPHPESPETPKADSLTTSISESLDMP-----------------KTNL 125

Query: 857 SNIAR-VSLFIPPQTPPETPSPDETSAPCPN 886
           S +A   S   P   P E P P     P PN
Sbjct: 126 SKMAHPESSETPTPGPTEMPHPGSPETPKPN 156


>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
          Length = 518

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 31/151 (20%), Positives = 51/151 (33%), Gaps = 24/151 (15%)

Query: 743 PNAPIP------DLFPPGQITDLKAEIHGGSLINLTWTAPGDDYDHGTAHKYIIRISTSI 796
           P+AP+P      D+  P + + LK          L    PG  Y   +   + + + T  
Sbjct: 23  PSAPLPLGCGFPDMAHPSETSPLKGASENSKRDRLNPEFPGTPYPEPSKLPHTVSLETFP 82

Query: 797 LDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDLFIAIQAVDKVDLKSEI 856
           LD  +  N  L+       P+   ++ +     E++                    K+ +
Sbjct: 83  LDFTEPLNPDLRETPHPESPETPKADSLTTSISESLDMP-----------------KTNL 125

Query: 857 SNIAR-VSLFIPPQTPPETPSPDETSAPCPN 886
           S +A   S   P   P E P P     P PN
Sbjct: 126 SKMAHPESSETPTPGPTEMPHPGSPETPKPN 156


>gi|148539860 protein tyrosine phosphatase, receptor type, T isoform
           2 precursor [Homo sapiens]
          Length = 1441

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 472 FGALSSGNGAVSQRSIQLESKGLTLQNSQWMNGTVIVDSTV 512
           F ALS  NG      ++L +KG + QNS  +     VD+TV
Sbjct: 705 FQALSKANGETKINCVRLATKGASTQNSNTVEPEKQVDNTV 745


>gi|117168245 ATPase, aminophospholipid transporter-like, Class I,
           type 8A, member 2 [Homo sapiens]
          Length = 1188

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 24/132 (18%)

Query: 405 SEIVLLTDGEDNTISGCFNE---------VKQSGAIIHTVALGPSAAQELEELSKMTGGL 455
           +++VLL+  E   +  C+ E         +K    + HT  +     Q  E L K++G +
Sbjct: 186 ADVVLLSSSEPQAM--CYVETANLDGETNLKIRQGLSHTADM-----QTREVLMKLSGTI 238

Query: 456 QTYASDQVQNNGLIDAFGALS-SGNGAVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGK 514
           +     +  N  L D  G L+  G   V+    Q+  +G  L+N+QW+ G V+     G 
Sbjct: 239 EC----EGPNRHLYDFTGNLNLDGKSLVALGPDQILLRGTQLRNTQWVFGIVVY---TGH 291

Query: 515 DTLFLITWTMQP 526
           DT  +   T  P
Sbjct: 292 DTKLMQNSTKAP 303


>gi|148612838 hypothetical protein LOC158358 [Homo sapiens]
          Length = 2103

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 17/216 (7%)

Query: 431  IIHTVALGPSAAQELEELSK---MTGGLQTYASD-------QVQNNGLIDAFGALSSGNG 480
            IIHT    P+  Q+++ ++K   +T    T A++        VQ   L+ A   LSSGNG
Sbjct: 1432 IIHT----PTKQQQVDYITKSYPVTRSEATAATNGDVISGTPVQKLMLVSAPSILSSGNG 1487

Query: 481  AVSQRSIQLESKGLTLQNSQWMNGTVIVDSTVGKDTLFLITWTMQPPQILLWDPSGQKQG 540
                 +  L S G++ Q   ++N  V   ++        +  T+ PP    +  + ++  
Sbjct: 1488 TAINMTPALTSTGVSAQKLVFINAPVPSGTSTPTLVAESLKQTLPPPLHKAYVKTPEQPQ 1547

Query: 541  GFVVDK--NTKMAYLQIPGIAKVGTWKYSLQASSQTLTLTVTSRASNATLPPITVTSKTN 598
              ++     T +     P ++++   K  L      +  + T  A  +      VT K  
Sbjct: 1548 IVLIPSTVGTPIKINSSPAVSQIKDVKIGLNIGQAIVNTSGTVPAIPSINILQNVTPKGE 1607

Query: 599  KDTSK-FPSPLVVYANIRQGASPILRASVTALIESV 633
              +SK +  PL    N    +S  +  ++T + ESV
Sbjct: 1608 DKSSKGYILPLSTSGNSVPVSSNFVSQNITPVNESV 1643


>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
          Length = 787

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 792 ISTSILDLRDKFNESLQVNTTALIPKEANSEEVFLFKPENITFENGTDLFIAIQAVDKVD 851
           +S  +LD+ D F E    + T+ IP+ +   EV LF+  +        +  +IQ      
Sbjct: 333 VSVKVLDVNDNFPELSISSLTSPIPENSPETEVALFRIRDRDSGENGKMICSIQDDVPFK 392

Query: 852 LKSEISNIARV 862
           LK  + N  R+
Sbjct: 393 LKPSVENFYRL 403


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,187,611
Number of Sequences: 37866
Number of extensions: 1692828
Number of successful extensions: 5841
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5808
Number of HSP's gapped (non-prelim): 23
length of query: 914
length of database: 18,247,518
effective HSP length: 111
effective length of query: 803
effective length of database: 14,044,392
effective search space: 11277646776
effective search space used: 11277646776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.