Guide to the Human Genome
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Name: ELF3 Sequence: fasta or formatted (371aa) NCBI GI: 166851840
Description:

E74-like factor 3 (ets domain transcription factor, epithelial-specific )

Referenced in:

Ets Family

Other entries for this name:
alt mRNA [371aa] E74-like factor 3 (ets domain transcription factor, epithelial-sp...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         25           2
 C cysteine            1.9          7           1
 D aspartate           7.5         28           2
 E glutamate           7.3         27           3
 F phenylalanine       4.0         15           1
 G glycine             8.4         31           2
 H histidine           2.2          8           1
 I isoleucine          2.7         10           2
 K lysine              7.0         26           3
 L leucine             9.4         35           2
 M methionine          2.2          8           1
 N asparagine          3.0         11           1
 P proline             4.9         18           2
 Q glutamine           4.0         15           2
 R arginine            5.4         20           2
 S serine             11.3         42           4
 T threonine           3.5         13           1
 V valine              3.2         12           1
 W tryptophan          2.4          9           1
 Y tyrosine            3.0         11           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E74-like factor 3 (ets domain transcription factor,... 
ELF3                  1.000   E74-like factor 3 (ets domain transcription factor,...
EHF                   0.208   ets homologous factor 
ELF5                  0.156   E74-like factor 5 ESE-2a 
ELF5                  0.156   E74-like factor 5 ESE-2b 
ELF1                  0.090   E74-like factor 1 (ets domain transcription factor) ...
ELF1                  0.090   E74-like factor 1 (ets domain transcription factor)...
ELF2                  0.089   E74-like factor 2 (ets domain transcription factor) ...
ELF2                  0.089   E74-like factor 2 (ets domain transcription factor) i...
ELF4                  0.086   E74-like factor 4 
ELF4                  0.086   E74-like factor 4 
ELK4                  0.077   ELK4 protein isoform b 
ELK4                  0.077   ELK4 protein isoform a 
ELK1                  0.077   ELK1 protein 
ELK1                  0.077   ELK1 protein 
ELK3                  0.077   ELK3 protein 
SPDEF                 0.074   SAM pointed domain containing ets transcription facto...
FEV                   0.070   FEV (ETS oncogene family) 
ETV6                  0.069   ets variant 6 
ERG                   0.067   ets-related isoform 2 
GABPA                 0.066   GA binding protein transcription factor, alpha subun...
ETV7                  0.066   ets variant 7 
ETV3                  0.066   ets variant gene 3 isoform 1 
ETV3                  0.066   ets variant gene 3 isoform 2 
ERG                   0.066   ets-related isoform 4 
ERG                   0.066   ets-related isoform 1 
ERG                   0.066   ets-related isoform 3 
FLI1                  0.066   Friend leukemia virus integration 1 
ETV3L                 0.065   ets variant 3-like 
ERF                   0.063   Ets2 repressor factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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