Guide to the Human Genome
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Name: FLI1 Sequence: fasta or formatted (452aa) NCBI GI: 7110593
Description:

Friend leukemia virus integration 1

Referenced in:

Ets Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         24           3
 C cysteine            0.9          4           1
 D aspartate           5.3         24           2
 E glutamate           5.1         23           1
 F phenylalanine       2.4         11           2
 G glycine             6.0         27           3
 H histidine           3.3         15           1
 I isoleucine          3.1         14           1
 K lysine              5.3         24           1
 L leucine             6.9         31           2
 M methionine          3.5         16           1
 N asparagine          6.4         29           2
 P proline             8.6         39           4
 Q glutamine           4.6         21           2
 R arginine            4.4         20           2
 S serine             11.1         50           3
 T threonine           5.5         25           2
 V valine              4.6         21           2
 W tryptophan          2.0          9           1
 Y tyrosine            5.5         25           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Friend leukemia virus integration 1 
ERG                   0.636   ets-related isoform 1 
ERG                   0.634   ets-related isoform 2 
ERG                   0.633   ets-related isoform 3 
ERG                   0.535   ets-related isoform 4 
FEV                   0.186   FEV (ETS oncogene family) 
GABPA                 0.153   GA binding protein transcription factor, alpha subun...
ETS1                  0.122   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.122   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.122   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS2                  0.121   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ERF                   0.110   Ets2 repressor factor 
ETV3                  0.105   ets variant gene 3 isoform 1 
LOC390937             0.105   PREDICTED: similar to hCG2040171 
LOC390937             0.105   PREDICTED: similar to hCG2040171 
LOC390937             0.105   PREDICTED: similar to hCG2040171 
ETV3                  0.101   ets variant gene 3 isoform 2 
ETV5                  0.101   ets variant gene 5 (ets-related molecule) 
ETV2                  0.101   ets variant gene 2 
ETV3L                 0.100   ets variant 3-like 
ETV1                  0.100   ets variant gene 1 isoform f 
ETV1                  0.100   ets variant gene 1 isoform e 
ETV1                  0.100   ets variant gene 1 isoform d 
ETV1                  0.100   ets variant gene 1 isoform c 
ETV1                  0.100   ets variant gene 1 isoform c 
ETV1                  0.100   ets variant gene 1 isoform b 
ETV1                  0.100   ets variant gene 1 isoform a 
ETV4                  0.095   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.095   ets variant gene 4 (E1A enhancer binding protein, E1...
ELK3                  0.092   ELK3 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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