Guide to the Human Genome
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Name: EHF Sequence: fasta or formatted (300aa) NCBI GI: 27436883
Description:

ets homologous factor

Referenced in:

Ets Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         12           2
 C cysteine            2.0          6           1
 D aspartate           5.0         15           1
 E glutamate           6.7         20           1
 F phenylalanine       3.7         11           2
 G glycine             6.3         19           3
 H histidine           3.7         11           1
 I isoleucine          3.7         11           1
 K lysine              6.7         20           3
 L leucine             9.3         28           2
 M methionine          2.7          8           1
 N asparagine          7.3         22           2
 P proline             4.3         13           2
 Q glutamine           5.3         16           1
 R arginine            4.7         14           2
 S serine              7.0         21           2
 T threonine           6.3         19           3
 V valine              3.7         11           1
 W tryptophan          3.7         11           1
 Y tyrosine            4.0         12           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ets homologous factor 
ELF5                  0.301   E74-like factor 5 ESE-2a 
ELF5                  0.301   E74-like factor 5 ESE-2b 
ELF3                  0.250   E74-like factor 3 (ets domain transcription factor,...
ELF3                  0.250   E74-like factor 3 (ets domain transcription factor,...
ETV7                  0.126   ets variant 7 
ELF2                  0.120   E74-like factor 2 (ets domain transcription factor) ...
ELF2                  0.120   E74-like factor 2 (ets domain transcription factor) i...
ELF4                  0.117   E74-like factor 4 
ELF4                  0.117   E74-like factor 4 
ELF1                  0.113   E74-like factor 1 (ets domain transcription factor) ...
ELF1                  0.113   E74-like factor 1 (ets domain transcription factor)...
ERG                   0.110   ets-related isoform 2 
FLI1                  0.105   Friend leukemia virus integration 1 
ERG                   0.104   ets-related isoform 4 
ERG                   0.104   ets-related isoform 1 
ERG                   0.104   ets-related isoform 3 
SPDEF                 0.099   SAM pointed domain containing ets transcription facto...
GABPA                 0.099   GA binding protein transcription factor, alpha subun...
ELK3                  0.096   ELK3 protein 
ELK1                  0.096   ELK1 protein 
ELK1                  0.096   ELK1 protein 
ELK4                  0.092   ELK4 protein isoform b 
ELK4                  0.092   ELK4 protein isoform a 
ETV6                  0.091   ets variant 6 
ETV2                  0.086   ets variant gene 2 
ETV5                  0.083   ets variant gene 5 (ets-related molecule) 
ETV1                  0.079   ets variant gene 1 isoform f 
ETV1                  0.079   ets variant gene 1 isoform e 
ETV1                  0.079   ets variant gene 1 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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