Guide to the Human Genome
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Name: ELF5 Sequence: fasta or formatted (255aa) NCBI GI: 4557551
Description:

E74-like factor 5 ESE-2b

Referenced in:

Ets Family

Other entries for this name:
alt prot [265aa] E74-like factor 5 ESE-2a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         12           2
 C cysteine            4.3         11           2
 D aspartate           5.9         15           1
 E glutamate           8.2         21           2
 F phenylalanine       5.5         14           2
 G glycine             4.3         11           1
 H histidine           3.1          8           1
 I isoleucine          3.5          9           1
 K lysine              5.9         15           2
 L leucine             9.4         24           3
 M methionine          2.0          5           1
 N asparagine          4.3         11           1
 P proline             2.0          5           1
 Q glutamine           4.7         12           1
 R arginine            5.1         13           2
 S serine              9.0         23           2
 T threonine           5.5         14           1
 V valine              3.5          9           2
 W tryptophan          3.5          9           1
 Y tyrosine            5.5         14           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E74-like factor 5 ESE-2b 
ELF5                  1.000   E74-like factor 5 ESE-2a 
EHF                   0.356   ets homologous factor 
ELF3                  0.222   E74-like factor 3 (ets domain transcription factor,...
ELF3                  0.222   E74-like factor 3 (ets domain transcription factor,...
SPDEF                 0.172   SAM pointed domain containing ets transcription facto...
FLI1                  0.117   Friend leukemia virus integration 1 
ELF2                  0.115   E74-like factor 2 (ets domain transcription factor) ...
ELF2                  0.115   E74-like factor 2 (ets domain transcription factor) i...
ELF4                  0.107   E74-like factor 4 
ELF4                  0.107   E74-like factor 4 
ELF1                  0.103   E74-like factor 1 (ets domain transcription factor) ...
ELF1                  0.103   E74-like factor 1 (ets domain transcription factor)...
ETV6                  0.098   ets variant 6 
ETV7                  0.096   ets variant 7 
GABPA                 0.094   GA binding protein transcription factor, alpha subun...
ELK1                  0.094   ELK1 protein 
ELK1                  0.094   ELK1 protein 
ELK3                  0.084   ELK3 protein 
ETV3                  0.084   ets variant gene 3 isoform 1 
ETV3                  0.084   ets variant gene 3 isoform 2 
ELK4                  0.084   ELK4 protein isoform b 
ELK4                  0.084   ELK4 protein isoform a 
ETV3L                 0.082   ets variant 3-like 
ETV1                  0.082   ets variant gene 1 isoform f 
ETV1                  0.082   ets variant gene 1 isoform e 
ETV1                  0.082   ets variant gene 1 isoform d 
ETV1                  0.082   ets variant gene 1 isoform c 
ETV1                  0.082   ets variant gene 1 isoform c 
ETV1                  0.082   ets variant gene 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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