Guide to the Human Genome
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Name: ELF1 Sequence: fasta or formatted (619aa) NCBI GI: 27363484
Description:

E74-like factor 1 (ets domain transcription factor) isoform a

Referenced in:

Ets Family

Other entries for this name:
alt prot [595aa] E74-like factor 1 (ets domain transcription factor) isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         41           2
 C cysteine            0.6          4           1
 D aspartate           5.3         33           6
 E glutamate           7.1         44           3
 F phenylalanine       2.1         13           1
 G glycine             4.4         27           2
 H histidine           1.3          8           1
 I isoleucine          4.7         29           2
 K lysine              6.3         39           3
 L leucine             6.3         39           2
 M methionine          2.4         15           1
 N asparagine          4.2         26           3
 P proline             8.1         50           2
 Q glutamine           6.9         43           2
 R arginine            3.2         20           1
 S serine             10.2         63           3
 T threonine           8.1         50           2
 V valine              9.7         60           3
 W tryptophan          0.5          3           1
 Y tyrosine            1.9         12           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E74-like factor 1 (ets domain transcription factor) ... 
ELF1                  0.950   E74-like factor 1 (ets domain transcription factor)...
ELF4                  0.287   E74-like factor 4 
ELF4                  0.287   E74-like factor 4 
ELF2                  0.253   E74-like factor 2 (ets domain transcription factor) ...
ELF2                  0.224   E74-like factor 2 (ets domain transcription factor) i...
ELK1                  0.075   ELK1 protein 
ELK1                  0.075   ELK1 protein 
ELK4                  0.070   ELK4 protein isoform a 
ELK4                  0.067   ELK4 protein isoform b 
ELK3                  0.061   ELK3 protein 
EHF                   0.059   ets homologous factor 
SPDEF                 0.058   SAM pointed domain containing ets transcription facto...
ELF3                  0.056   E74-like factor 3 (ets domain transcription factor,...
ELF3                  0.056   E74-like factor 3 (ets domain transcription factor,...
ETV4                  0.055   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.055   ets variant gene 4 (E1A enhancer binding protein, E1...
ETS2                  0.055   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ETS1                  0.054   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.054   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.054   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETV6                  0.053   ets variant 6 
ETV1                  0.052   ets variant gene 1 isoform f 
ETV1                  0.052   ets variant gene 1 isoform e 
ETV1                  0.052   ets variant gene 1 isoform d 
ETV1                  0.052   ets variant gene 1 isoform c 
ETV1                  0.052   ets variant gene 1 isoform c 
ETV1                  0.052   ets variant gene 1 isoform b 
ETV1                  0.052   ets variant gene 1 isoform a 
ETV7                  0.051   ets variant 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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