Guide to the Human Genome
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Name: ETV3 Sequence: fasta or formatted (143aa) NCBI GI: 20270188
Description:

ets variant gene 3 isoform 2

Referenced in:

Ets Family

Other entries for this name:
alt prot [512aa] ets variant gene 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          5           1
 C cysteine            1.4          2           1
 D aspartate           2.8          4           1
 E glutamate           6.3          9           2
 F phenylalanine       5.6          8           1
 G glycine             8.4         12           4
 H histidine           2.1          3           1
 I isoleucine          6.3          9           1
 K lysine             10.5         15           1
 L leucine             7.7         11           2
 M methionine          2.1          3           1
 N asparagine          4.9          7           1
 P proline             4.9          7           1
 Q glutamine           5.6          8           2
 R arginine            7.0         10           2
 S serine              4.9          7           2
 T threonine           2.8          4           1
 V valine              4.2          6           1
 W tryptophan          2.8          4           1
 Y tyrosine            6.3          9           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ets variant gene 3 isoform 2 
ETV3                  0.943   ets variant gene 3 isoform 1 
ETV3L                 0.732   ets variant 3-like 
ERF                   0.693   Ets2 repressor factor 
LOC390937             0.668   PREDICTED: similar to hCG2040171 
LOC390937             0.668   PREDICTED: similar to hCG2040171 
LOC390937             0.668   PREDICTED: similar to hCG2040171 
ERG                   0.336   ets-related isoform 4 
ERG                   0.336   ets-related isoform 2 
ERG                   0.336   ets-related isoform 1 
ERG                   0.336   ets-related isoform 3 
FLI1                  0.332   Friend leukemia virus integration 1 
FEV                   0.329   FEV (ETS oncogene family) 
ETS2                  0.304   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ETS1                  0.304   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.304   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.304   v-ets erythroblastosis virus E26 oncogene homolog 1...
GABPA                 0.279   GA binding protein transcription factor, alpha subun...
ELK1                  0.275   ELK1 protein 
ELK1                  0.275   ELK1 protein 
ELK4                  0.271   ELK4 protein isoform b 
ELK4                  0.271   ELK4 protein isoform a 
ELK3                  0.250   ELK3 protein 
ETV4                  0.246   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.246   ets variant gene 4 (E1A enhancer binding protein, E1...
ETV2                  0.239   ets variant gene 2 
ETV1                  0.236   ets variant gene 1 isoform f 
ETV1                  0.236   ets variant gene 1 isoform e 
ETV1                  0.236   ets variant gene 1 isoform d 
ETV1                  0.236   ets variant gene 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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