Guide to the Human Genome
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Name: ELF1 Sequence: fasta or formatted (595aa) NCBI GI: 223941929
Description:

E74-like factor 1 (ets domain transcription factor) isoform b

Referenced in:

Ets Family

Other entries for this name:
alt prot [619aa] E74-like factor 1 (ets domain transcription factor) isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         40           2
 C cysteine            0.7          4           1
 D aspartate           5.0         30           6
 E glutamate           7.2         43           3
 F phenylalanine       2.0         12           1
 G glycine             4.5         27           2
 H histidine           1.2          7           1
 I isoleucine          4.7         28           2
 K lysine              6.6         39           3
 L leucine             6.4         38           2
 M methionine          2.4         14           1
 N asparagine          4.0         24           1
 P proline             8.1         48           2
 Q glutamine           7.2         43           2
 R arginine            3.4         20           1
 S serine             10.1         60           3
 T threonine           8.1         48           2
 V valine              9.2         55           3
 W tryptophan          0.5          3           1
 Y tyrosine            2.0         12           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E74-like factor 1 (ets domain transcription factor)... 
ELF1                  0.989   E74-like factor 1 (ets domain transcription factor) ...
ELF4                  0.293   E74-like factor 4 
ELF4                  0.293   E74-like factor 4 
ELF2                  0.262   E74-like factor 2 (ets domain transcription factor) ...
ELF2                  0.227   E74-like factor 2 (ets domain transcription factor) i...
ELK1                  0.078   ELK1 protein 
ELK1                  0.078   ELK1 protein 
ELK4                  0.073   ELK4 protein isoform a 
ELK4                  0.070   ELK4 protein isoform b 
ELK3                  0.063   ELK3 protein 
EHF                   0.061   ets homologous factor 
SPDEF                 0.060   SAM pointed domain containing ets transcription facto...
ETS2                  0.059   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ELF3                  0.059   E74-like factor 3 (ets domain transcription factor,...
ELF3                  0.059   E74-like factor 3 (ets domain transcription factor,...
ETV4                  0.058   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.058   ets variant gene 4 (E1A enhancer binding protein, E1...
ETS1                  0.056   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETS1                  0.056   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS1                  0.056   v-ets erythroblastosis virus E26 oncogene homolog 1...
ETV6                  0.055   ets variant 6 
ERG                   0.054   ets-related isoform 2 
ETV1                  0.054   ets variant gene 1 isoform f 
ETV1                  0.054   ets variant gene 1 isoform e 
ETV1                  0.054   ets variant gene 1 isoform d 
ETV1                  0.054   ets variant gene 1 isoform c 
ETV1                  0.054   ets variant gene 1 isoform c 
ETV1                  0.054   ets variant gene 1 isoform b 
ETV1                  0.054   ets variant gene 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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