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Search of human proteins with 166706879
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|166706879 erythrocyte membrane protein band 4.9 isoform 1
[Homo sapiens]
(405 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|166706877 erythrocyte membrane protein band 4.9 isoform 1 [Ho... 816 0.0
gi|166706879 erythrocyte membrane protein band 4.9 isoform 1 [Ho... 816 0.0
gi|166706875 erythrocyte membrane protein band 4.9 isoform 1 [Ho... 816 0.0
gi|166706883 erythrocyte membrane protein band 4.9 isoform 2 [Ho... 758 0.0
gi|166706881 erythrocyte membrane protein band 4.9 isoform 2 [Ho... 758 0.0
gi|166706885 erythrocyte membrane protein band 4.9 isoform 3 [Ho... 699 0.0
gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens] 306 2e-83
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens] 299 3e-81
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens] 299 3e-81
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens] 299 3e-81
gi|7662330 actin binding LIM protein family, member 3 [Homo sapi... 192 6e-49
gi|194272196 actin binding LIM protein family, member 2 isoform ... 154 1e-37
gi|194272198 actin binding LIM protein family, member 2 isoform ... 145 8e-35
gi|194272202 actin binding LIM protein family, member 2 isoform ... 100 2e-21
gi|153792514 actin binding LIM protein family, member 2 isoform ... 96 6e-20
gi|194272204 actin binding LIM protein family, member 2 isoform ... 96 6e-20
gi|194272200 actin binding LIM protein family, member 2 isoform ... 96 6e-20
gi|194272207 actin binding LIM protein family, member 2 isoform ... 74 3e-13
gi|194394237 villin 1 [Homo sapiens] 62 1e-09
gi|94721268 villin-like protein [Homo sapiens] 45 2e-04
gi|150417973 supervillin isoform 2 [Homo sapiens] 44 3e-04
gi|150417971 supervillin isoform 1 [Homo sapiens] 44 3e-04
gi|91208420 bassoon protein [Homo sapiens] 43 4e-04
gi|17572824 advillin [Homo sapiens] 43 6e-04
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.006
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.006
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.006
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.006
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.006
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 39 0.006
>gi|166706877 erythrocyte membrane protein band 4.9 isoform 1 [Homo
sapiens]
Length = 405
Score = 816 bits (2108), Expect = 0.0
Identities = 405/405 (100%), Positives = 405/405 (100%)
Query: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD
Sbjct: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT
Sbjct: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
Query: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD
Sbjct: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
Query: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE
Sbjct: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
Query: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR
Sbjct: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
Query: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP
Sbjct: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
Query: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF
Sbjct: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
>gi|166706879 erythrocyte membrane protein band 4.9 isoform 1 [Homo
sapiens]
Length = 405
Score = 816 bits (2108), Expect = 0.0
Identities = 405/405 (100%), Positives = 405/405 (100%)
Query: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD
Sbjct: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT
Sbjct: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
Query: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD
Sbjct: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
Query: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE
Sbjct: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
Query: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR
Sbjct: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
Query: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP
Sbjct: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
Query: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF
Sbjct: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
>gi|166706875 erythrocyte membrane protein band 4.9 isoform 1 [Homo
sapiens]
Length = 405
Score = 816 bits (2108), Expect = 0.0
Identities = 405/405 (100%), Positives = 405/405 (100%)
Query: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD
Sbjct: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT
Sbjct: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
Query: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD
Sbjct: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
Query: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE
Sbjct: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
Query: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR
Sbjct: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
Query: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP
Sbjct: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
Query: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF
Sbjct: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
>gi|166706883 erythrocyte membrane protein band 4.9 isoform 2 [Homo
sapiens]
Length = 383
Score = 758 bits (1956), Expect = 0.0
Identities = 383/405 (94%), Positives = 383/405 (94%), Gaps = 22/405 (5%)
Query: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD
Sbjct: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT
Sbjct: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
Query: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD
Sbjct: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
Query: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE
Sbjct: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
Query: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR
Sbjct: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
Query: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
LQSTEFSPSGSETGSPGLQ IYPYEMLVVTNKGRTKLPP
Sbjct: 301 LQSTEFSPSGSETGSPGLQ----------------------IYPYEMLVVTNKGRTKLPP 338
Query: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF
Sbjct: 339 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 383
>gi|166706881 erythrocyte membrane protein band 4.9 isoform 2 [Homo
sapiens]
Length = 383
Score = 758 bits (1956), Expect = 0.0
Identities = 383/405 (94%), Positives = 383/405 (94%), Gaps = 22/405 (5%)
Query: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD
Sbjct: 1 MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPD 60
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT
Sbjct: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
Query: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD
Sbjct: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
Query: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE
Sbjct: 181 PNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREE 240
Query: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR
Sbjct: 241 LSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSR 300
Query: 301 LQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPP 360
LQSTEFSPSGSETGSPGLQ IYPYEMLVVTNKGRTKLPP
Sbjct: 301 LQSTEFSPSGSETGSPGLQ----------------------IYPYEMLVVTNKGRTKLPP 338
Query: 361 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF
Sbjct: 339 GVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 383
>gi|166706885 erythrocyte membrane protein band 4.9 isoform 3 [Homo
sapiens]
Length = 358
Score = 699 bits (1803), Expect = 0.0
Identities = 352/374 (94%), Positives = 352/374 (94%), Gaps = 22/374 (5%)
Query: 32 AKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHFTYSLLEHVELPRSRERSLSPKST 91
AKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHFTYSLLEHVELPRSRERSLSPKST
Sbjct: 7 AKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHFTYSLLEHVELPRSRERSLSPKST 66
Query: 92 SPPPSPEVWADSRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRE 151
SPPPSPEVWADSRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRE
Sbjct: 67 SPPPSPEVWADSRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRE 126
Query: 152 SVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKAS 211
SVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKAS
Sbjct: 127 SVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKAS 186
Query: 212 RRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLP 271
RRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLP
Sbjct: 187 RRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLP 246
Query: 272 DRTPFHTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRG 331
DRTPFHTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQ
Sbjct: 247 DRTPFHTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQ------------ 294
Query: 332 NSLPCVLEQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLA 391
IYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLA
Sbjct: 295 ----------IYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLA 344
Query: 392 LWKRNELKKKASLF 405
LWKRNELKKKASLF
Sbjct: 345 LWKRNELKKKASLF 358
>gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens]
Length = 455
Score = 306 bits (785), Expect = 2e-83
Identities = 191/414 (46%), Positives = 249/414 (60%), Gaps = 39/414 (9%)
Query: 10 TSPGSVSPSRDSSVPGSPS-SIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHF 68
TS S+ SS+PGSP +I AK+DN++L YKDLAAIPK KAI DIERPDL+ YEP +
Sbjct: 63 TSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFY 122
Query: 69 TYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSR--------SPGIISQASAPRTTGT 120
T + E E SP++ SP PS E + D R S G I+ R + T
Sbjct: 123 TSGYDDKQERQSLGE---SPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYT 179
Query: 121 PRTSLP--HFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQP 178
P TS HFH P+ NIY+KPPIYKQ ++ ++ ED II+ SKFPAAQ
Sbjct: 180 PTTSRSPQHFHRPDQG---INIYRKPPIYKQHAALAAQSKSS---ED-IIKFSKFPAAQA 232
Query: 179 PDPNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQR 238
PDP++ KIETD+WP PPS AVV + ++R + R EEDD EE+ R+ Q
Sbjct: 233 PDPSETPKIETDHWPGPPSFAVVGPDMKRRSSGR--------EEDD---EELLRRRQLQE 281
Query: 239 EELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTL 298
E+L K+ S LG++ILKEEMEK R + +P +++ H +SK++SLP YGR L
Sbjct: 282 EQLMKLNSGLGQLILKEEMEKESRERSSLLASRYDSPINSASHIPSSKTASLPGYGRNGL 341
Query: 299 SRLQSTEFSP-------SGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVT 351
R ST+F+ SG L +G RMDRG S+P +LE KI+PYEML+VT
Sbjct: 342 HRPVSTDFAQYNSYGDVSGGVRDYQTLPDGHMPAMRMDRGVSMPNMLEPKIFPYEMLMVT 401
Query: 352 NKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
N+GR K+ VDR RLERHL+ E F +F MS +EF +L LW+RN++KKKA LF
Sbjct: 402 NRGRNKILREVDRTRLERHLAPEVFREIFGMSIQEFDRLPLWRRNDMKKKAKLF 455
>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
Length = 746
Score = 299 bits (766), Expect = 3e-81
Identities = 195/446 (43%), Positives = 252/446 (56%), Gaps = 68/446 (15%)
Query: 10 TSPGSVSPSRDSSVPGSPS-SIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHF 68
TS S+ SS+PGSP +I AK+DN++L YKDLAAIPK KAI DIERPDL+ YEP +
Sbjct: 319 TSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFY 378
Query: 69 TYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSR--------SPGIISQASAPRTTGT 120
T + E E SP++ SP PS E + D R S G I+ R + T
Sbjct: 379 TSGYDDKQERQSLGE---SPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYT 435
Query: 121 PRTSLP--HFHHPETS-----------RPDS---------------------NIYKKPPI 146
P TS HFH P RPDS NIY+KPPI
Sbjct: 436 PTTSRSPQHFHRPGNEPSSGRNSPLPYRPDSRPLTPTYAQAPKHFHVPDQGINIYRKPPI 495
Query: 147 YKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWR 206
YKQ ++ ++ ED II+ SKFPAAQ PDP++ KIETD+WP PPS AVV + +
Sbjct: 496 YKQHAALAAQSKSS---ED-IIKFSKFPAAQAPDPSETPKIETDHWPGPPSFAVVGPDMK 551
Query: 207 KRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRK 266
+R + R EEDD EE+ R+ Q E+L K+ S LG++ILKEEMEK R
Sbjct: 552 RRSSGR--------EEDD---EELLRRRQLQEEQLMKLNSGLGQLILKEEMEKESRERSS 600
Query: 267 TRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSP-------SGSETGSPGLQ 319
+ +P +++ H +SK++SLP YGR L R ST+F+ SG L
Sbjct: 601 LLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVSTDFAQYNSYGDVSGGVRDYQTLP 660
Query: 320 NGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRV 379
+G RMDRG S+P +LE KI+PYEML+VTN+GR K+ VDR RLERHL+ E F +
Sbjct: 661 DGHMPAMRMDRGVSMPNMLEPKIFPYEMLMVTNRGRNKILREVDRTRLERHLAPEVFREI 720
Query: 380 FAMSPEEFGKLALWKRNELKKKASLF 405
F MS +EF +L LW+RN++KKKA LF
Sbjct: 721 FGMSIQEFDRLPLWRRNDMKKKAKLF 746
>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
Length = 718
Score = 299 bits (766), Expect = 3e-81
Identities = 195/446 (43%), Positives = 252/446 (56%), Gaps = 68/446 (15%)
Query: 10 TSPGSVSPSRDSSVPGSPS-SIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHF 68
TS S+ SS+PGSP +I AK+DN++L YKDLAAIPK KAI DIERPDL+ YEP +
Sbjct: 291 TSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFY 350
Query: 69 TYSLLEHVELPRSRERSLSPKSTSPPPSPEVWAD--------SRSPGIISQASAPRTTGT 120
T + E E SP++ SP PS E + D S S G I+ R + T
Sbjct: 351 TSGYDDKQERQSLGE---SPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYT 407
Query: 121 PRTSL--PHFHHPETS-----------RPDS---------------------NIYKKPPI 146
P TS HFH P RPDS NIY+KPPI
Sbjct: 408 PTTSRSPQHFHRPGNEPSSGRNSPLPYRPDSRPLTPTYAQAPKHFHVPDQGINIYRKPPI 467
Query: 147 YKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWR 206
YKQ ++ ++ ED II+ SKFPAAQ PDP++ KIETD+WP PPS AVV + +
Sbjct: 468 YKQHAALAAQSKSS---ED-IIKFSKFPAAQAPDPSETPKIETDHWPGPPSFAVVGPDMK 523
Query: 207 KRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRK 266
+R + R EEDD EE+ R+ Q E+L K+ S LG++ILKEEMEK R
Sbjct: 524 RRSSGR--------EEDD---EELLRRRQLQEEQLMKLNSGLGQLILKEEMEKESRERSS 572
Query: 267 TRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSP-------SGSETGSPGLQ 319
+ +P +++ H +SK++SLP YGR L R ST+F+ SG L
Sbjct: 573 LLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVSTDFAQYNSYGDVSGGVRDYQTLP 632
Query: 320 NGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRV 379
+G RMDRG S+P +LE KI+PYEML+VTN+GR K+ VDR RLERHL+ E F +
Sbjct: 633 DGHMPAMRMDRGVSMPNMLEPKIFPYEMLMVTNRGRNKILREVDRTRLERHLAPEVFREI 692
Query: 380 FAMSPEEFGKLALWKRNELKKKASLF 405
F MS +EF +L LW+RN++KKKA LF
Sbjct: 693 FGMSIQEFDRLPLWRRNDMKKKAKLF 718
>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
Length = 778
Score = 299 bits (766), Expect = 3e-81
Identities = 195/446 (43%), Positives = 252/446 (56%), Gaps = 68/446 (15%)
Query: 10 TSPGSVSPSRDSSVPGSPS-SIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHF 68
TS S+ SS+PGSP +I AK+DN++L YKDLAAIPK KAI DIERPDL+ YEP +
Sbjct: 351 TSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFY 410
Query: 69 TYSLLEHVELPRSRERSLSPKSTSPPPSPEVWAD--------SRSPGIISQASAPRTTGT 120
T + E E SP++ SP PS E + D S S G I+ R + T
Sbjct: 411 TSGYDDKQERQSLGE---SPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYT 467
Query: 121 PRTSL--PHFHHPETS-----------RPDS---------------------NIYKKPPI 146
P TS HFH P RPDS NIY+KPPI
Sbjct: 468 PTTSRSPQHFHRPGNEPSSGRNSPLPYRPDSRPLTPTYAQAPKHFHVPDQGINIYRKPPI 527
Query: 147 YKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWR 206
YKQ ++ ++ ED II+ SKFPAAQ PDP++ KIETD+WP PPS AVV + +
Sbjct: 528 YKQHAALAAQSKSS---ED-IIKFSKFPAAQAPDPSETPKIETDHWPGPPSFAVVGPDMK 583
Query: 207 KRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRK 266
+R + R EEDD EE+ R+ Q E+L K+ S LG++ILKEEMEK R
Sbjct: 584 RRSSGR--------EEDD---EELLRRRQLQEEQLMKLNSGLGQLILKEEMEKESRERSS 632
Query: 267 TRSLPDRTPFHTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSP-------SGSETGSPGLQ 319
+ +P +++ H +SK++SLP YGR L R ST+F+ SG L
Sbjct: 633 LLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVSTDFAQYNSYGDVSGGVRDYQTLP 692
Query: 320 NGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRV 379
+G RMDRG S+P +LE KI+PYEML+VTN+GR K+ VDR RLERHL+ E F +
Sbjct: 693 DGHMPAMRMDRGVSMPNMLEPKIFPYEMLMVTNRGRNKILREVDRTRLERHLAPEVFREI 752
Query: 380 FAMSPEEFGKLALWKRNELKKKASLF 405
F MS +EF +L LW+RN++KKKA LF
Sbjct: 753 FGMSIQEFDRLPLWRRNDMKKKAKLF 778
>gi|7662330 actin binding LIM protein family, member 3 [Homo
sapiens]
Length = 683
Score = 192 bits (487), Expect = 6e-49
Identities = 159/469 (33%), Positives = 219/469 (46%), Gaps = 118/469 (25%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E+ K TS S+SP S GSP+ ++ AK+DN++L YKDLAA+PK K+I +++RPD
Sbjct: 268 EKKLKHRRTSETSISPPGSSI--GSPNRVICAKVDNEILNYKDLAALPKVKSIYEVQRPD 325
Query: 61 LMIYEPHFTY---SLLE---------------------------------HVELPRSRER 84
L+ YEPH Y +LE +++ P +
Sbjct: 326 LISYEPHSRYMSDEMLERCGYGESLGTLSPYSQDIYENLDLRQRRASSPGYIDSPTYSRQ 385
Query: 85 SLSPKSTSPP-----PSPEVWADSRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSN 139
+SP + P PE RS SQ +T T + HFH P DSN
Sbjct: 386 GMSPTFSRSPHHYYRSGPE---SGRSSPYHSQLDVRSSTPTSYQAPKHFHIP---AGDSN 439
Query: 140 IYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLA 199
IY+KPPIYK+ + S TK + I ++SK+ PDP + E++YW S
Sbjct: 440 IYRKPPIYKRHGDL--STATKSKTSEDISQTSKYSPIYSPDPYYAS--ESEYWTYHGSPK 495
Query: 200 VVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEK 259
V R R+ S G EE+D D + K+ S +G++ILKEEM+
Sbjct: 496 VP----RARRFSSGG-----EEDDFD-------------RSMHKLQSGIGRLILKEEMKA 533
Query: 260 -----SLPIRRKTRSLPDRTPFHTSLHQGT-----------------SKSSSLPAYGRTT 297
+ P S R HT+ ++ + SKS+SLPAY R
Sbjct: 534 RSSSYADPWTPPRSSTSSREALHTAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNG 593
Query: 298 LSRLQSTE-FSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKGRT 356
L R S + F + G++ E KIYPYE+L+VT +GR
Sbjct: 594 LHRTPSADLFHYDSMNAVNWGMR-------------------EYKIYPYELLLVTTRGRN 634
Query: 357 KLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
+LP VDR RLERHLS E+F +VF M+ EF +LALWKRNELKK+A LF
Sbjct: 635 RLPKDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLF 683
>gi|194272196 actin binding LIM protein family, member 2 isoform 1
[Homo sapiens]
Length = 645
Score = 154 bits (390), Expect = 1e-37
Identities = 133/420 (31%), Positives = 193/420 (45%), Gaps = 60/420 (14%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRE--------RSLSPKSTSPPPSPEVWADSRSPGIISQA 112
++ Y P+ ++S + + R+ SP ST SRSP S+
Sbjct: 330 MISYSPYISHSAGDRQSYGEGDQDDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRP 389
Query: 113 SAPRTTGTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSK 172
+ + GT + L HP + + Y P ++ ES +P ++ SK
Sbjct: 390 AGTVSVGTS-SCLSLSQHPSPTSVFRHHYI--PYFRGSESGRSTPSLS------VLSDSK 440
Query: 173 FPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRK-----RKASRRGAEEEEEEEDDDSG 227
PP Q A P V + +RK + A+RR E+ + D+
Sbjct: 441 ----PPPSTYQQAPRHFHV----PDTGVKDNIYRKPPIYRQHAARRSDGEDGSLDQDNRK 492
Query: 228 EEMKALRERQREELSKVTSNLGKMILKEEMEKSL-PIRRKTR-SLPDRTPFHTSLHQGTS 285
++ L + + + +L L P++R S R P+ S
Sbjct: 493 QKSSWLMLKGDADTRTNSPDLDTQSLSHSSGTDRDPLQRMAGDSFHSRFPY--------S 544
Query: 286 KSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPY 345
KS LP +G+ L + ++ +P G++ + G R E KIYPY
Sbjct: 545 KSDPLPGHGKNGLDQ-RNANLAPCGADPDASW-----GMR-------------EYKIYPY 585
Query: 346 EMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
+ L+VTN+ R KLP VDR RLERHLS E+F VF MS EEF +LALWKRN+LKKKA LF
Sbjct: 586 DSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKALLF 645
>gi|194272198 actin binding LIM protein family, member 2 isoform 2
[Homo sapiens]
Length = 611
Score = 145 bits (365), Expect = 8e-35
Identities = 129/411 (31%), Positives = 183/411 (44%), Gaps = 76/411 (18%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGT 120
++ Y P+ ++S + + S K + SP S R T T
Sbjct: 330 MISYSPYISHSAGDRQSYGEGDQDDRSYKQCR----------TSSPSSTGSVSLGRYTPT 379
Query: 121 PRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPD 180
R S H+ SRP S + P ++ SK PP
Sbjct: 380 SR-SPQHY-----SRPGSESGRSTPSLS------------------VLSDSK----PPPS 411
Query: 181 PNQPAKIETDYWPCPPSLAVVETEWRK----RKASRRGAEEEEEEEDDDSGEEMKALRER 236
Q A P V + +RK R+ + R ++ E+ D D+ ++ L +
Sbjct: 412 TYQQAPRHFHV----PDTGVKDNIYRKPPIYRQHAARRSDGEDGSLDQDNRKKSSWLMLK 467
Query: 237 QREELSKVTSNLGKMILKEEMEKSL-PIRRKTR-SLPDRTPFHTSLHQGTSKSSSLPAYG 294
+ + +L L P++R S R P+ SKS LP +G
Sbjct: 468 GDADTRTNSPDLDTQSLSHSSGTDRDPLQRMAGDSFHSRFPY--------SKSDPLPGHG 519
Query: 295 RTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPYEMLVVTNKG 354
+ L + ++ +P G++ + G R E KIYPY+ L+VTN+
Sbjct: 520 KNGLDQ-RNANLAPCGADPDASW-----GMR-------------EYKIYPYDSLIVTNRI 560
Query: 355 RTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
R KLP VDR RLERHLS E+F VF MS EEF +LALWKRN+LKKKA LF
Sbjct: 561 RVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKALLF 611
>gi|194272202 actin binding LIM protein family, member 2 isoform 4
[Homo sapiens]
Length = 559
Score = 100 bits (249), Expect = 2e-21
Identities = 58/121 (47%), Positives = 73/121 (60%), Gaps = 19/121 (15%)
Query: 285 SKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYP 344
SKS LP +G+ L + ++ +P G++ + G R E KIYP
Sbjct: 458 SKSDPLPGHGKNGLDQ-RNANLAPCGADPDASW-----GMR-------------EYKIYP 498
Query: 345 YEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASL 404
Y+ L+VTN+ R KLP VDR RLERHLS E+F VF MS EEF +LALWKRN+LKKKA L
Sbjct: 499 YDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKALL 558
Query: 405 F 405
F
Sbjct: 559 F 559
Score = 70.5 bits (171), Expect = 3e-12
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRE--------RSLSPKSTSPPPSPEVWADSRSPGIISQA 112
++ Y P+ ++S + + R+ SP ST SRSP S+
Sbjct: 330 MISYSPYISHSAGDRQSYGEGDQDDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRP 389
Query: 113 SAPRTTG 119
+A R+ G
Sbjct: 390 AARRSDG 396
>gi|153792514 actin binding LIM protein family, member 2 isoform 6
[Homo sapiens]
Length = 521
Score = 95.9 bits (237), Expect = 6e-20
Identities = 46/67 (68%), Positives = 53/67 (79%)
Query: 339 EQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNEL 398
+ KIYPY+ L+VTN+ R KLP VDR RLERHLS E+F VF MS EEF +LALWKRN+L
Sbjct: 455 QYKIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDL 514
Query: 399 KKKASLF 405
KKKA LF
Sbjct: 515 KKKALLF 521
Score = 70.5 bits (171), Expect = 3e-12
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRE--------RSLSPKSTSPPPSPEVWADSRSPGIISQA 112
++ Y P+ ++S + + R+ SP ST SRSP S+
Sbjct: 330 MISYSPYISHSAGDRQSYGEGDQDDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRP 389
Query: 113 SAPRTTG 119
+A R+ G
Sbjct: 390 AARRSDG 396
>gi|194272204 actin binding LIM protein family, member 2 isoform 5
[Homo sapiens]
Length = 531
Score = 95.9 bits (237), Expect = 6e-20
Identities = 46/67 (68%), Positives = 53/67 (79%)
Query: 339 EQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNEL 398
+ KIYPY+ L+VTN+ R KLP VDR RLERHLS E+F VF MS EEF +LALWKRN+L
Sbjct: 465 QYKIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDL 524
Query: 399 KKKASLF 405
KKKA LF
Sbjct: 525 KKKALLF 531
Score = 75.1 bits (183), Expect = 1e-13
Identities = 74/259 (28%), Positives = 108/259 (41%), Gaps = 19/259 (7%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSR--SPGIISQASAPRTT 118
++ Y P+ ++S + S + LSP T + R SP S R T
Sbjct: 330 MISYSPYISHSAGDRQSYGES-PQLLSPTPTEGDQDDRSYKQCRTSSPSSTGSVSLGRYT 388
Query: 119 GTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRES---VGGSPQTKHLIEDLIIESSKFPA 175
T R S H+ P R D +++ S + G T+ DL +S +
Sbjct: 389 PTSR-SPQHYSRPAARRSDGEDGSLDQDNRKKSSWLMLKGDADTRTNSPDLDTQSLSHSS 447
Query: 176 AQPPDPNQPA---KIETDYWPCPPSLAVVETEWR--------KRKASRRGAEEEEEEEDD 224
DP Q + Y P +V R + + R + EE +E
Sbjct: 448 GTDRDPLQRMAGDSFHSQYKIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFG 507
Query: 225 DSGEEMKALRERQREELSK 243
S EE L +R +L K
Sbjct: 508 MSIEEFDRLALWKRNDLKK 526
>gi|194272200 actin binding LIM protein family, member 2 isoform 3
[Homo sapiens]
Length = 572
Score = 95.9 bits (237), Expect = 6e-20
Identities = 46/67 (68%), Positives = 53/67 (79%)
Query: 339 EQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNEL 398
+ KIYPY+ L+VTN+ R KLP VDR RLERHLS E+F VF MS EEF +LALWKRN+L
Sbjct: 506 QYKIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDL 565
Query: 399 KKKASLF 405
KKKA LF
Sbjct: 566 KKKALLF 572
Score = 89.0 bits (219), Expect = 7e-18
Identities = 60/172 (34%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRE--------RSLSPKSTSPPPSPEVWADSRSPGIISQA 112
++ Y P+ ++S + + R+ SP ST SRSP S+
Sbjct: 330 MISYSPYISHSAGDRQSYGEGDQDDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRP 389
Query: 113 SAPRTTGTPRTSL---------------PHFHHPETSRPDSNIYKKPPIYKQ 149
+ TP S+ HFH P+T D NIY+KPPIY+Q
Sbjct: 390 GSESGRSTPSLSVLSDSKPPPSTYQQAPRHFHVPDTGVKD-NIYRKPPIYRQ 440
>gi|194272207 actin binding LIM protein family, member 2 isoform 7
[Homo sapiens]
Length = 470
Score = 73.6 bits (179), Expect = 3e-13
Identities = 59/189 (31%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 2 ERLQKQPLTSPGSVSPSRDSSVPGSPSSIV-AKMDNQVLGYKDLAAIPKDKAILDIERPD 60
E K+ TS S+ SS GSPS ++ AK+ ++L Y+DLAA+PK KAI DI+RPD
Sbjct: 270 EDRNKETRTSSESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPD 329
Query: 61 LMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWADSR--SPGIISQASAPRTT 118
++ Y P+ ++S + S + LSP T + R SP S R T
Sbjct: 330 MISYSPYISHSAGDRQSYGES-PQLLSPTPTEGDQDDRSYKQCRTSSPSSTGSVSLGRYT 388
Query: 119 GTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRES----VGGSPQTKHLIEDLIIESSKFP 174
T R S H+ P R D ++++S + G T+ DL +S
Sbjct: 389 PTSR-SPQHYSRPAARRSDGEDGSLDQDNRKQKSSWLMLKGDADTRTNSPDLDTQSLSHS 447
Query: 175 AAQPPDPNQ 183
+ DP Q
Sbjct: 448 SGTDRDPLQ 456
>gi|194394237 villin 1 [Homo sapiens]
Length = 827
Score = 61.6 bits (148), Expect = 1e-09
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 342 IYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKK 401
I+P E LV NK +LP GVD R E HLS EDF++ F M+P F L WK+ LKK+
Sbjct: 766 IFPLEQLV--NKPVEELPEGVDPSRKEEHLSIEDFTQAFGMTPAAFSALPRWKQQNLKKE 823
Query: 402 ASLF 405
LF
Sbjct: 824 KGLF 827
>gi|94721268 villin-like protein [Homo sapiens]
Length = 856
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 358 LPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
LP GVD R E +LS DF +F S EEF +A W++ + KK+ F
Sbjct: 809 LPEGVDPARREFYLSDSDFQDIFGKSKEEFYSMATWRQRQEKKQLGFF 856
>gi|150417973 supervillin isoform 2 [Homo sapiens]
Length = 2214
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 358 LPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
LP GVD ++LE +L+ EDF M+ +E+ L WK+ LKK LF
Sbjct: 2167 LPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF 2214
Score = 28.9 bits (63), Expect = 8.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 193 PCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEE 229
P PPSL V+E + R + EEEE + GEE
Sbjct: 402 PKPPSLTVLEGDGRDSPVLHVCESKAEEEEGEGEGEE 438
>gi|150417971 supervillin isoform 1 [Homo sapiens]
Length = 1788
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 358 LPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 405
LP GVD ++LE +L+ EDF M+ +E+ L WK+ LKK LF
Sbjct: 1741 LPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF 1788
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 43.1 bits (100), Expect = 4e-04
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 136 PDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPP-----DPNQPAKIETD 190
PD ++ ++P + + ES+ GSP+ + E SS PA+ P P + +E D
Sbjct: 952 PDPSLDREPEL--EMESLTGSPEDRSRGE----HSSTLPASTPSYTSGTSPTSLSSLEED 1005
Query: 191 YWPCPPSLAVVETEWRKRKASRRG-------AEEEEEEEDDDSGEEMKALRERQRE-ELS 242
P +E ++RKA R E+ EEE+ EE+ +E+ RE E
Sbjct: 1006 SDSSPSRRQRLEEAKQQRKARHRSHGPLLPTIEDSSEEEELREEEELLREQEKMREVEQQ 1065
Query: 243 KVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTSKSSSL-PAYGRTTLSRL 301
++ S K + + E+ RR+ RS P + S + S + L A L R
Sbjct: 1066 RIRSTARK--TRRDKEELRAQRRRERS--KTPPSNLSPIEDASPTEELRQAAEMEELHRS 1121
Query: 302 QSTEFSPSGS-ETGSPGLQNGEGQRGRMDRGNSLP 335
+E+SPS S ++ + L G + + +LP
Sbjct: 1122 SCSEYSPSPSLDSEAEALDGGPSRLYKSGSEYNLP 1156
>gi|17572824 advillin [Homo sapiens]
Length = 819
Score = 42.7 bits (99), Expect = 6e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 339 EQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNEL 398
E K YP +L+ +LP V+ + E +LS +DF VF ++ +F L WK+ ++
Sbjct: 755 EPKYYPIAVLLKNQN--QELPEDVNPAKKENYLSEQDFVSVFGITRGQFAALPGWKQLQM 812
Query: 399 KKKASLF 405
KK+ LF
Sbjct: 813 KKEKGLF 819
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 39.3 bits (90), Expect = 0.006
Identities = 86/361 (23%), Positives = 125/361 (34%), Gaps = 47/361 (13%)
Query: 8 PLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPH 67
P SP PS S P SPS ++ L + +IP D
Sbjct: 250 PEHSPSESQPSSPSPTP-SPSPVLEPGSEPNLA---VLSIPGDTMT-------------- 291
Query: 68 FTYSLLEHVELPRSRERSLSPKSTSPPPSP------EVWADSRSPGIISQ-ASAPRTTGT 120
T + P SRE P SP P+P EV P S+ +S+P T
Sbjct: 292 -TIQMSVEESTPISRETG-EPYRLSPEPTPLAEPILEVEVTLSKPVPESEFSSSPLQAPT 349
Query: 121 PRTS-LPHFHHPETSRPDSNIYKK---------PPIYKQRESVGGSPQTKHLIEDLIIES 170
P S H P P ++ + PP V +P + E+L+ +
Sbjct: 350 PLASHTVEIHEPNGMVPSEDLEPEVESSPELAPPPACPSESPVPIAPTAQP--EELLNGA 407
Query: 171 SKFPAAQ---PPDPNQPAKIETDYWPCP--PSLAVVETEWRKRKASRRGAEEEEEEEDDD 225
PA +P + AK T P PS A EEEEEEE+ +
Sbjct: 408 PSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEEEGE 467
Query: 226 SGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTS 285
+GE +A E+ EEL S L + +E + + S+P R L++ +
Sbjct: 468 AGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAV-SVPKRRRKIKELNKKEA 526
Query: 286 KSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPY 345
L A+ + + P+GS G G G R + + E KI+
Sbjct: 527 VGDLLDAFKEANPAVPEVENQPPAGSNPGPE--SEGSGVPPRPEEADETWDSKEDKIHNA 584
Query: 346 E 346
E
Sbjct: 585 E 585
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 202 ETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSL 261
E W+ +S+R A +++ E+D G + + L R R L+K+T + + ++K+ + ++
Sbjct: 731 EKAWKP--SSKRTAADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVTQLAI 788
Query: 262 PIRRKTRSLPD 272
+ + + D
Sbjct: 789 DTEERLKGVID 799
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 39.3 bits (90), Expect = 0.006
Identities = 86/361 (23%), Positives = 125/361 (34%), Gaps = 47/361 (13%)
Query: 8 PLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPH 67
P SP PS S P SPS ++ L + +IP D
Sbjct: 163 PEHSPSESQPSSPSPTP-SPSPVLEPGSEPNLA---VLSIPGDTMT-------------- 204
Query: 68 FTYSLLEHVELPRSRERSLSPKSTSPPPSP------EVWADSRSPGIISQ-ASAPRTTGT 120
T + P SRE P SP P+P EV P S+ +S+P T
Sbjct: 205 -TIQMSVEESTPISRETG-EPYRLSPEPTPLAEPILEVEVTLSKPVPESEFSSSPLQAPT 262
Query: 121 PRTS-LPHFHHPETSRPDSNIYKK---------PPIYKQRESVGGSPQTKHLIEDLIIES 170
P S H P P ++ + PP V +P + E+L+ +
Sbjct: 263 PLASHTVEIHEPNGMVPSEDLEPEVESSPELAPPPACPSESPVPIAPTAQP--EELLNGA 320
Query: 171 SKFPAAQ---PPDPNQPAKIETDYWPCP--PSLAVVETEWRKRKASRRGAEEEEEEEDDD 225
PA +P + AK T P PS A EEEEEEE+ +
Sbjct: 321 PSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEEEGE 380
Query: 226 SGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTS 285
+GE +A E+ EEL S L + +E + + S+P R L++ +
Sbjct: 381 AGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAV-SVPKRRRKIKELNKKEA 439
Query: 286 KSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPY 345
L A+ + + P+GS G G G R + + E KI+
Sbjct: 440 VGDLLDAFKEANPAVPEVENQPPAGSNPGPE--SEGSGVPPRPEEADETWDSKEDKIHNA 497
Query: 346 E 346
E
Sbjct: 498 E 498
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 202 ETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSL 261
E W+ +S+R A +++ E+D G + + L R R L+K+T + + ++K+ + ++
Sbjct: 644 EKAWKP--SSKRTAADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVTQLAI 701
Query: 262 PIRRKTRSLPD 272
+ + + D
Sbjct: 702 DTEERLKGVID 712
>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
isoform 3 [Homo sapiens]
Length = 1435
Score = 39.3 bits (90), Expect = 0.006
Identities = 86/361 (23%), Positives = 125/361 (34%), Gaps = 47/361 (13%)
Query: 8 PLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPH 67
P SP PS S P SPS ++ L + +IP D
Sbjct: 86 PEHSPSESQPSSPSPTP-SPSPVLEPGSEPNLA---VLSIPGDTMT-------------- 127
Query: 68 FTYSLLEHVELPRSRERSLSPKSTSPPPSP------EVWADSRSPGIISQ-ASAPRTTGT 120
T + P SRE P SP P+P EV P S+ +S+P T
Sbjct: 128 -TIQMSVEESTPISRETG-EPYRLSPEPTPLAEPILEVEVTLSKPVPESEFSSSPLQAPT 185
Query: 121 PRTS-LPHFHHPETSRPDSNIYKK---------PPIYKQRESVGGSPQTKHLIEDLIIES 170
P S H P P ++ + PP V +P + E+L+ +
Sbjct: 186 PLASHTVEIHEPNGMVPSEDLEPEVESSPELAPPPACPSESPVPIAPTAQP--EELLNGA 243
Query: 171 SKFPAAQ---PPDPNQPAKIETDYWPCP--PSLAVVETEWRKRKASRRGAEEEEEEEDDD 225
PA +P + AK T P PS A EEEEEEE+ +
Sbjct: 244 PSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEEEGE 303
Query: 226 SGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTS 285
+GE +A E+ EEL S L + +E + + S+P R L++ +
Sbjct: 304 AGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAV-SVPKRRRKIKELNKKEA 362
Query: 286 KSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPY 345
L A+ + + P+GS G G G R + + E KI+
Sbjct: 363 VGDLLDAFKEANPAVPEVENQPPAGSNPGPE--SEGSGVPPRPEEADETWDSKEDKIHNA 420
Query: 346 E 346
E
Sbjct: 421 E 421
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 202 ETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSL 261
E W+ +S+R A +++ E+D G + + L R R L+K+T + + ++K+ + ++
Sbjct: 567 EKAWKP--SSKRTAADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVTQLAI 624
Query: 262 PIRRKTRSLPD 272
+ + + D
Sbjct: 625 DTEERLKGVID 635
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 39.3 bits (90), Expect = 0.006
Identities = 86/361 (23%), Positives = 125/361 (34%), Gaps = 47/361 (13%)
Query: 8 PLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPH 67
P SP PS S P SPS ++ L + +IP D
Sbjct: 250 PEHSPSESQPSSPSPTP-SPSPVLEPGSEPNLA---VLSIPGDTMT-------------- 291
Query: 68 FTYSLLEHVELPRSRERSLSPKSTSPPPSP------EVWADSRSPGIISQ-ASAPRTTGT 120
T + P SRE P SP P+P EV P S+ +S+P T
Sbjct: 292 -TIQMSVEESTPISRETG-EPYRLSPEPTPLAEPILEVEVTLSKPVPESEFSSSPLQAPT 349
Query: 121 PRTS-LPHFHHPETSRPDSNIYKK---------PPIYKQRESVGGSPQTKHLIEDLIIES 170
P S H P P ++ + PP V +P + E+L+ +
Sbjct: 350 PLASHTVEIHEPNGMVPSEDLEPEVESSPELAPPPACPSESPVPIAPTAQP--EELLNGA 407
Query: 171 SKFPAAQ---PPDPNQPAKIETDYWPCP--PSLAVVETEWRKRKASRRGAEEEEEEEDDD 225
PA +P + AK T P PS A EEEEEEE+ +
Sbjct: 408 PSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEEEGE 467
Query: 226 SGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTS 285
+GE +A E+ EEL S L + +E + + S+P R L++ +
Sbjct: 468 AGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAV-SVPKRRRKIKELNKKEA 526
Query: 286 KSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPY 345
L A+ + + P+GS G G G R + + E KI+
Sbjct: 527 VGDLLDAFKEANPAVPEVENQPPAGSNPGPE--SEGSGVPPRPEEADETWDSKEDKIHNA 584
Query: 346 E 346
E
Sbjct: 585 E 585
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 202 ETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSL 261
E W+ +S+R A +++ E+D G + + L R R L+K+T + + ++K+ + ++
Sbjct: 731 EKAWKP--SSKRTAADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVTQLAI 788
Query: 262 PIRRKTRSLPD 272
+ + + D
Sbjct: 789 DTEERLKGVID 799
>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
isoform 4 [Homo sapiens]
Length = 1403
Score = 39.3 bits (90), Expect = 0.006
Identities = 86/361 (23%), Positives = 125/361 (34%), Gaps = 47/361 (13%)
Query: 8 PLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPH 67
P SP PS S P SPS ++ L + +IP D
Sbjct: 54 PEHSPSESQPSSPSPTP-SPSPVLEPGSEPNLA---VLSIPGDTMT-------------- 95
Query: 68 FTYSLLEHVELPRSRERSLSPKSTSPPPSP------EVWADSRSPGIISQ-ASAPRTTGT 120
T + P SRE P SP P+P EV P S+ +S+P T
Sbjct: 96 -TIQMSVEESTPISRETG-EPYRLSPEPTPLAEPILEVEVTLSKPVPESEFSSSPLQAPT 153
Query: 121 PRTS-LPHFHHPETSRPDSNIYKK---------PPIYKQRESVGGSPQTKHLIEDLIIES 170
P S H P P ++ + PP V +P + E+L+ +
Sbjct: 154 PLASHTVEIHEPNGMVPSEDLEPEVESSPELAPPPACPSESPVPIAPTAQP--EELLNGA 211
Query: 171 SKFPAAQ---PPDPNQPAKIETDYWPCP--PSLAVVETEWRKRKASRRGAEEEEEEEDDD 225
PA +P + AK T P PS A EEEEEEE+ +
Sbjct: 212 PSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEEEGE 271
Query: 226 SGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSLHQGTS 285
+GE +A E+ EEL S L + +E + + S+P R L++ +
Sbjct: 272 AGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVAV-SVPKRRRKIKELNKKEA 330
Query: 286 KSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSLPCVLEQKIYPY 345
L A+ + + P+GS G G G R + + E KI+
Sbjct: 331 VGDLLDAFKEANPAVPEVENQPPAGSNPGPE--SEGSGVPPRPEEADETWDSKEDKIHNA 388
Query: 346 E 346
E
Sbjct: 389 E 389
Score = 32.0 bits (71), Expect = 1.0
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 202 ETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSL 261
E W+ +S+R A +++ E+D G + + L R R L+K+T + + ++K+ + ++
Sbjct: 535 EKAWKP--SSKRTAADKDRGEEDADGSKTQDLFRRVRSILNKLTPQMFQQLMKQVTQLAI 592
Query: 262 PIRRKTRSLPD 272
+ + + D
Sbjct: 593 DTEERLKGVID 603
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 39.3 bits (90), Expect = 0.006
Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 29/195 (14%)
Query: 127 HFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAK 186
HFH + + N+ K+ ES + + L E+ ++E K +PP
Sbjct: 524 HFHELRVTEEEINVLKQDLQNALEESERNKEKVREL-EEKLVEREKGTVIKPP------- 575
Query: 187 IETDYWPCPPSLAVVETEWRKRKAS--RRGAEEEEE-------------EEDDDSGEEMK 231
+Y S V K KA + E +EE +E D E+MK
Sbjct: 576 -VEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMK 634
Query: 232 ALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTP--FHTSLHQGTSKSSS 289
R +EL+K S L + L +E + L RK +SL D T H + H+ + ++
Sbjct: 635 EAMNRMIDELNKQVSELSQ--LYKEAQAELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTN 692
Query: 290 LP-AYGRTTLSRLQS 303
+ A LS ++S
Sbjct: 693 VSRAKAEDALSEMKS 707
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,247,263
Number of Sequences: 37866
Number of extensions: 1069772
Number of successful extensions: 12240
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 9284
Number of HSP's gapped (non-prelim): 2391
length of query: 405
length of database: 18,247,518
effective HSP length: 105
effective length of query: 300
effective length of database: 14,271,588
effective search space: 4281476400
effective search space used: 4281476400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.