Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 166197662

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|166197662 chloride intracellular channel 5 isoform a [Homo
sapiens]
         (410 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|166197662 chloride intracellular channel 5 isoform a [Homo sa...   836   0.0  
gi|82617632 chloride intracellular channel 5 isoform b [Homo sap...   482   e-136
gi|7330335 chloride intracellular channel 4 [Homo sapiens]            385   e-107
gi|27894378 chloride intracellular channel 6 [Homo sapiens]           369   e-102
gi|66346733 chloride intracellular channel 2 [Homo sapiens]           328   7e-90
gi|14251209 chloride intracellular channel 1 [Homo sapiens]           307   1e-83
gi|40288290 chloride intracellular channel 3 [Homo sapiens]           228   8e-60
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]            40   0.005
gi|145386566 zinc finger protein 148 [Homo sapiens]                    35   0.12 
gi|108773799 ganglioside-induced differentiation-associated prot...    35   0.12 
gi|108773797 ganglioside-induced differentiation-associated prot...    35   0.12 
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           33   0.61 
gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]         32   1.4  
gi|148612801 KIAA1009 protein [Homo sapiens]                           31   2.3  
gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]           30   3.0  
gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]     30   3.0  
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa...    30   3.0  
gi|10835073 N-myristoyltransferase 1 [Homo sapiens]                    30   4.0  
gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens]    30   4.0  
gi|4506163 presenilin 1 isoform I-467 [Homo sapiens]                   30   5.2  
gi|195947397 presenilin 1 isoform I-463 [Homo sapiens]                 30   5.2  
gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]    30   5.2  
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu...    29   8.8  
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre...    29   8.8  
gi|8923754 serine/threonine kinase 32B [Homo sapiens]                  29   8.8  
gi|120953264 folliculin interacting protein 1 isoform 2 [Homo sa...    29   8.8  
gi|120953291 folliculin interacting protein 1 isoform 1 [Homo sa...    29   8.8  
gi|4505785 phosphorylase kinase, gamma 2 (testis) [Homo sapiens]       29   8.8  

>gi|166197662 chloride intracellular channel 5 isoform a [Homo
           sapiens]
          Length = 410

 Score =  836 bits (2159), Expect = 0.0
 Identities = 410/410 (100%), Positives = 410/410 (100%)

Query: 1   MNDEDYSTIYDTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHEYDFVS 60
           MNDEDYSTIYDTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHEYDFVS
Sbjct: 1   MNDEDYSTIYDTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHEYDFVS 60

Query: 61  VYTIKGEETSLASVQSEDRGYLLPDEIYSELQEAHPGEPQEDRGISMEGLYSSTQDQQLC 120
           VYTIKGEETSLASVQSEDRGYLLPDEIYSELQEAHPGEPQEDRGISMEGLYSSTQDQQLC
Sbjct: 61  VYTIKGEETSLASVQSEDRGYLLPDEIYSELQEAHPGEPQEDRGISMEGLYSSTQDQQLC 120

Query: 121 AAELQENGSVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEGLEEKEGAHMNPEIYLFVK 180
           AAELQENGSVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEGLEEKEGAHMNPEIYLFVK
Sbjct: 121 AAELQENGSVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEGLEEKEGAHMNPEIYLFVK 180

Query: 181 AGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDV 240
           AGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDV
Sbjct: 181 AGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDV 240

Query: 241 KTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGL 300
           KTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGL
Sbjct: 241 KTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGL 300

Query: 301 TKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKK 360
           TKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKK
Sbjct: 301 TKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKK 360

Query: 361 YRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS 410
           YRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS
Sbjct: 361 YRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS 410


>gi|82617632 chloride intracellular channel 5 isoform b [Homo
           sapiens]
          Length = 251

 Score =  482 bits (1241), Expect = e-136
 Identities = 238/243 (97%), Positives = 239/243 (98%)

Query: 168 GAHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP 227
           G   +PEI LFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP
Sbjct: 9   GDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP 68

Query: 228 GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN 287
           GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN
Sbjct: 69  GTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKN 128

Query: 288 TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL 347
           TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL
Sbjct: 129 TKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNL 188

Query: 348 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 407
           LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL
Sbjct: 189 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248

Query: 408 SRS 410
           SRS
Sbjct: 249 SRS 251


>gi|7330335 chloride intracellular channel 4 [Homo sapiens]
          Length = 253

 Score =  385 bits (990), Expect = e-107
 Identities = 186/248 (75%), Positives = 217/248 (87%), Gaps = 3/248 (1%)

Query: 162 GLEEKEGAHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPAD 221
           GL+E++     P I LFVKAG DGESIGNCPFSQRLFMILWLKGVVF+VTTVDLKRKPAD
Sbjct: 9   GLKEED---KEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAD 65

Query: 222 LHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKF 281
           L NLAPGTHPPF+TFN +VKTDVNKIEEFLEE L P KY KL+ KH ESNTAG+DIF+KF
Sbjct: 66  LQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKF 125

Query: 282 SAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELT 341
           SAYIKN++ + N ALERGL K L+KLD+YLN+PLP+EID N+  + K S RKFLDG+E+T
Sbjct: 126 SAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMT 185

Query: 342 LADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYA 401
           LADCNLLPKLH+VK+VAKKYRN+DIP EMTG+WRYL NAY+RDEFTNTC +D E+E+AY+
Sbjct: 186 LADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245

Query: 402 DVAKRLSR 409
           DVAKRL++
Sbjct: 246 DVAKRLTK 253


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score =  369 bits (947), Expect = e-102
 Identities = 176/234 (75%), Positives = 205/234 (87%)

Query: 174 EIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPF 233
           +I LFVKAG DGESIGNCPFSQRLFMILWLKGV+FNVTTVDLKRKPADL NLAPGT+PPF
Sbjct: 452 DITLFVKAGYDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKPADLQNLAPGTNPPF 511

Query: 234 LTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNN 293
           +TF+G+VKTDVNKIEEFLEE L P +YPKL  +H ESN+AG D+F+KFSA+IKNTK+  N
Sbjct: 512 MTFDGEVKTDVNKIEEFLEEKLAPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKKDAN 571

Query: 294 AALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHV 353
              E+ L KAL+KLD+YLN+PLP+EIDA +  +   S RKFLDGDELTLADCNLLPKLH+
Sbjct: 572 EIHEKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDELTLADCNLLPKLHI 631

Query: 354 VKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 407
           +KIVAKKYR+++ P+EMTG+WRYL NAYARDEFTNTC AD EIE AY+DVAKR+
Sbjct: 632 IKIVAKKYRDFEFPSEMTGIWRYLNNAYARDEFTNTCPADQEIEHAYSDVAKRM 685


>gi|66346733 chloride intracellular channel 2 [Homo sapiens]
          Length = 247

 Score =  328 bits (840), Expect = 7e-90
 Identities = 156/243 (64%), Positives = 196/243 (80%)

Query: 166 KEGAHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNL 225
           + G  ++PEI LFVKAG DGESIGNCPF QRLFMILWLKGV FNVTTVD+ RKP +L +L
Sbjct: 5   RPGTQVDPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDL 64

Query: 226 APGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYI 285
           APGT+PPFL +N ++KTD  KIEEFLE+TL P +YP L+ K++ES   G ++F+KFSAYI
Sbjct: 65  APGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYI 124

Query: 286 KNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADC 345
           KNT+++ N   E+ L K  K+LDDYLNTPL +EID ++  E   SRR FLDGD+LTLADC
Sbjct: 125 KNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADC 184

Query: 346 NLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAK 405
           +LLPKL+++K+ AKKYR++DIPAE +G+WRYL NAYAR+EFT+TC  D EIE  YA+VAK
Sbjct: 185 SLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAK 244

Query: 406 RLS 408
           + S
Sbjct: 245 QKS 247


>gi|14251209 chloride intracellular channel 1 [Homo sapiens]
          Length = 241

 Score =  307 bits (786), Expect = 1e-83
 Identities = 155/240 (64%), Positives = 181/240 (75%), Gaps = 2/240 (0%)

Query: 169 AHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPG 228
           A   P++ LFVKAG DG  IGNCPFSQRLFM+LWLKGV FNVTTVD KR+   +  L PG
Sbjct: 2   AEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPG 61

Query: 229 THPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNT 288
              PFL +  +V TD NKIEEFLE  L P +YPKLAA + ESNTAG+DIF+KFSAYIKN+
Sbjct: 62  GQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNS 121

Query: 289 KQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKG-SRRKFLDGDELTLADCNL 347
               N  LE+GL KALK LD+YL +PLPEE+D  T  ED+G S+RKFLDG+ELTLADCNL
Sbjct: 122 NPALNDNLEKGLLKALKVLDNYLTSPLPEEVD-ETSAEDEGVSQRKFLDGNELTLADCNL 180

Query: 348 LPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 407
           LPKLH+V++V KKYR + IP    G+ RYL NAYAR+EF +TC  D EIELAY  VAK L
Sbjct: 181 LPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240


>gi|40288290 chloride intracellular channel 3 [Homo sapiens]
          Length = 236

 Score =  228 bits (581), Expect = 8e-60
 Identities = 119/227 (52%), Positives = 152/227 (66%), Gaps = 2/227 (0%)

Query: 174 EIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPF 233
           ++ LFVKA  DGES+G+CP  QRLFM+L LKGV F +TTVD +R P  L + APG+  P 
Sbjct: 5   KLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQLPI 64

Query: 234 LTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNN 293
           L ++ D KTD  +IE+FLEETL P  +P LA ++RESNTAG D+F KFSA+IKN     +
Sbjct: 65  LLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPAQD 124

Query: 294 AALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHV 353
            AL + L +AL +LD YL  PL  E+      + + SRR+FLDGD LTLADC+LLPKLH+
Sbjct: 125 EALYQQLLRALARLDSYLRAPLEHELAGEP--QLRESRRRFLDGDRLTLADCSLLPKLHI 182

Query: 354 VKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAY 400
           V  V   +R   IPAE+ G+ RYL +A    EF  TC   +EI  AY
Sbjct: 183 VDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAY 229


>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
          Length = 241

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 191 CPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAP-GTHPPFLTFNGDVKTDVNKIEE 249
           CPF++R  ++L  KG+   V  ++LK KP       P G  P      G +  +     E
Sbjct: 32  CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91

Query: 250 FLEETLTPEKYPKLAAKHRESNTAGIDIFSK----FSAYIKNTKQQNNAALERGLTKALK 305
           +L+E    +K        +      +++FSK      ++I++  +++ A L+    K   
Sbjct: 92  YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151

Query: 306 KLDDYL 311
           KL++ L
Sbjct: 152 KLEEVL 157


>gi|145386566 zinc finger protein 148 [Homo sapiens]
          Length = 794

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 14/183 (7%)

Query: 11  DTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHEYDFVSVYTIKGE--- 67
           D  Q +   E P +P  + S +YDD  ++L+ +  L A   N+ EY  ++V TI  +   
Sbjct: 443 DIDQVDNLQEGPSKPVHS-STNYDDAMQFLKKKRYLQAASNNSREY-ALNVGTIASQPSV 500

Query: 68  -ETSLASV--QSEDRGYLLPDEIYSELQEAHPGEPQEDRGISMEGLYSSTQDQQLCAAEL 124
            + ++ASV  +S     L    +  E++  H      D+ +  + +  +  D     A  
Sbjct: 501 TQAAVASVIDESTTASILESQALNVEIKSNH------DKNVIPDEVLQTLLDHYSHKANG 554

Query: 125 QENGSVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEGLEEKEGAHMNPEIYLFVKAGID 184
           Q   S    D    SS +I  S+    T       +      + A+M  E   F++  +D
Sbjct: 555 QHEISFSVADTEVTSSISINSSEVPEVTPSENVGSSSQASSSDKANMLQEYSKFLQQALD 614

Query: 185 GES 187
             S
Sbjct: 615 RTS 617


>gi|108773799 ganglioside-induced differentiation-associated protein
           1 isoform b [Homo sapiens]
          Length = 290

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 283 AYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE---EIDANTCGEDKGSRRKFLDGDE 339
           AYI   K+  +  L+    K LKK+ D L   L +   E+        +  ++ +L G+ 
Sbjct: 116 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 175

Query: 340 LTLADCNLLPKLHVVKIVAKKYRNY 364
            TLAD +L   LH +K +    RN+
Sbjct: 176 FTLADVSLAVTLHRLKFLGFARRNW 200


>gi|108773797 ganglioside-induced differentiation-associated protein
           1 isoform a [Homo sapiens]
          Length = 358

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 283 AYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE---EIDANTCGEDKGSRRKFLDGDE 339
           AYI   K+  +  L+    K LKK+ D L   L +   E+        +  ++ +L G+ 
Sbjct: 184 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 243

Query: 340 LTLADCNLLPKLHVVKIVAKKYRNY 364
            TLAD +L   LH +K +    RN+
Sbjct: 244 FTLADVSLAVTLHRLKFLGFARRNW 268


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 7/161 (4%)

Query: 11   DTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHE-YDFVSVYTIKGEET 69
            DT  +     VP+      SP  D    Y   + D+    L+        S  T  G   
Sbjct: 1245 DTSHHTAPMSVPEPHAATASPPTDGTTRY-SAQTDITDDSLDRKSPASSFSHSTPSGNGK 1303

Query: 70   SL-ASVQSEDRGYLLPDEIYSELQEAHPGEPQEDRGISMEGLYSSTQDQQLCAAELQENG 128
             L  ++ S D   L PD  +S+  E+ PG   ED  I  E      +D+       Q+  
Sbjct: 1304 YLPGAITSPDEHILTPDSSFSKSPESLPGPALEDIAIKWEDKVPGLKDR----TSEQKKE 1359

Query: 129  SVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEGLEEKEGA 169
               K+++      T++H +       + Y   E L  K  A
Sbjct: 1360 PEPKDEVLQQKDKTLEHKEVVEPKDTAIYQKDEALHVKNEA 1400


>gi|7706575 transmembrane 7 superfamily member 3 [Homo sapiens]
          Length = 570

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 35  DVHEYLRPENDLYATQLNTHEYDFVSVYTIKGEETSLASVQSEDR 79
           DV++Y  PENDL    L  H    VSV  +K     + ++ + D+
Sbjct: 195 DVYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKVVTLTANDK 239


>gi|148612801 KIAA1009 protein [Homo sapiens]
          Length = 1403

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 3   DEDYSTIYDTIQ-NERTYEVPDQPEENESPHYDDVHEYLRPENDLY-ATQLNTHEYDFVS 60
           D + ST +  +  N+   E+ D   ENES H +    Y     D Y    L T + +  S
Sbjct: 156 DSNDSTHFKALHSNQANAELTDDEHENESKHEELAENYSDDFEDEYVGAPLTTKDEEMPS 215

Query: 61  VYTIKGEETSLASVQSEDRGYL 82
               K E+ S+   + E  G L
Sbjct: 216 KENSKSEKISVPKQEEEKTGML 237


>gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]
          Length = 243

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 191 CPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFL 234
           CP+S R  ++L  K +   V  ++L+ KP   +   P  H P L
Sbjct: 32  CPYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVL 75


>gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]
          Length = 951

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 228 GTHPPFLTFNGDVKTDVNKI---EEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAY 284
           GT    L  + D+  ++N++   E+   ET  P   PK  A H    T   +  + +   
Sbjct: 91  GTDEDDLEADDDLLAELNEVLGEEQKASETPPPVAQPKPEAPHPGLETTLQERLALYQTA 150

Query: 285 IKNTKQQNNAALERGLTKALKKLDDYL 311
           I++ +Q  ++A  R   + LK L++ L
Sbjct: 151 IESARQAGDSAKMRRYDRGLKTLENLL 177


>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 22/174 (12%)

Query: 162 GLEEKEGAHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPAD 221
           GL +       P I L + +  D  S+   P  + L +   L+ + F++   DLK++ A 
Sbjct: 385 GLLQAPPPGFTPFICLSLLSTWDNSSLAMSPGEEILTL---LQTIPFDIE--DLKKEAA- 438

Query: 222 LHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKF 281
             NL P     +L  + D      ++++ L+E +  ++   ++ + +E N    ++    
Sbjct: 439 --NLPPEDDDQWLDLSPD------QLDQLLQEAVGKKESESVSKEEKEQNYDLTEVSESM 490

Query: 282 SAYIKNTKQQNNAALERGLTKALKKLD--------DYLNTPLPEEIDANTCGED 327
            A+I        A L R  ++A    D        D +  P P E D++   ++
Sbjct: 491 KAFISKVSTHKGAELPREPSEAPITFDADSFLNYFDKILGPRPNESDSDDLDDE 544


>gi|10835073 N-myristoyltransferase 1 [Homo sapiens]
          Length = 496

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 22/98 (22%), Positives = 44/98 (44%)

Query: 257 PEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLP 316
           P K   L A+  +     I++FS      K  ++ +  + +   T+ + KL + +NT  P
Sbjct: 78  PVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGP 137

Query: 317 EEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVV 354
            E D +   ++  +  +    D L L D  +L +L+ +
Sbjct: 138 VEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTL 175


>gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens]
          Length = 640

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 71  LASVQSEDRGYLLPDEIYSELQEAHPGEPQEDRGISMEGLYS 112
           +A++ S+D  Y L D ++ ELQ   PG  + DR  S+E + S
Sbjct: 248 VANLNSKDLSYTLKDYVFKELQRDWPGYSEIDRR-SLESVLS 288


>gi|4506163 presenilin 1 isoform I-467 [Homo sapiens]
          Length = 467

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 56  YDFVSVYTIKGEETSLASVQSEDRGYLLPDEIYSE----LQEAHPGEPQEDRGISMEGLY 111
           YD V+V   KG    L     E    L P  IYS     L     G+P+  R +S    Y
Sbjct: 256 YDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKY 315

Query: 112 ---SSTQDQQLCAAELQENG 128
              S+ ++ Q   AE  + G
Sbjct: 316 NAESTERESQDTVAENDDGG 335


>gi|195947397 presenilin 1 isoform I-463 [Homo sapiens]
          Length = 463

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 56  YDFVSVYTIKGEETSLASVQSEDRGYLLPDEIYSE----LQEAHPGEPQEDRGISMEGLY 111
           YD V+V   KG    L     E    L P  IYS     L     G+P+  R +S    Y
Sbjct: 252 YDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSKNSKY 311

Query: 112 ---SSTQDQQLCAAELQENG 128
              S+ ++ Q   AE  + G
Sbjct: 312 NAESTERESQDTVAENDDGG 331


>gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]
          Length = 216

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 16/164 (9%)

Query: 194 SQRLFMILWLKGVVFNVTTVDL-----KRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIE 248
           S R+ + L LKG+ +    ++L     ++   D   L P    P L  +G        I 
Sbjct: 17  SWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAII 76

Query: 249 EFLEETL-TPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKL 307
           E+LEE   TP   P+   K R S     D+ +     ++N         E  LT A   +
Sbjct: 77  EYLEEMRPTPRLLPQ-DPKKRASVRMISDLIAGGIQPLQNLSVLKQVGEEMQLTWAQNAI 135

Query: 308 DDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKL 351
               N    E+I  +T G        +  GDE+T+AD  L+P++
Sbjct: 136 TCGFNAL--EQILQSTAGI-------YCVGDEVTMADLCLVPQV 170


>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
           precursor [Homo sapiens]
          Length = 513

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 10/161 (6%)

Query: 4   EDYSTIYDTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHEYDFVSVYT 63
           ++ S   D   +E + E     +EN S   ++V    R +N    T     + D  S  +
Sbjct: 327 QEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDS--S 384

Query: 64  IKGEETSLASVQSEDRGYLLPDEIYSELQ--EAHPGEPQEDRGISMEGLYSSTQDQQLCA 121
            +    +L+  +SE R      E    L   E  P  P+++   S EGL S +      +
Sbjct: 385 EEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSS-----S 439

Query: 122 AELQENGSVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEG 162
           AE Q   S  +ED  S S  + +  +  ++T+    S+ +G
Sbjct: 440 AESQSEESHSEED-DSDSQDSSRSKEDSNSTESKSSSEEDG 479


>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
           precursor [Homo sapiens]
          Length = 497

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 10/161 (6%)

Query: 4   EDYSTIYDTIQNERTYEVPDQPEENESPHYDDVHEYLRPENDLYATQLNTHEYDFVSVYT 63
           ++ S   D   +E + E     +EN S   ++V    R +N    T     + D  S  +
Sbjct: 311 QEESQNVDGPSSESSQEANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDS--S 368

Query: 64  IKGEETSLASVQSEDRGYLLPDEIYSELQ--EAHPGEPQEDRGISMEGLYSSTQDQQLCA 121
            +    +L+  +SE R      E    L   E  P  P+++   S EGL S +      +
Sbjct: 369 EEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSS-----S 423

Query: 122 AELQENGSVMKEDLPSPSSFTIQHSKAFSTTKYSCYSDAEG 162
           AE Q   S  +ED  S S  + +  +  ++T+    S+ +G
Sbjct: 424 AESQSEESHSEED-DSDSQDSSRSKEDSNSTESKSSSEEDG 463


>gi|8923754 serine/threonine kinase 32B [Homo sapiens]
          Length = 414

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 33  YDDVHEYLRPENDLYATQLNTHEYDFVSVYTIKGEETSLASVQSEDRGYLLPDEIYSELQ 92
           Y  +H  ++P+N L     + H  DF     +KG E   AS  +  + Y+ P E++    
Sbjct: 140 YHIIHRDIKPDNILLDEHGHVHITDFNIATVVKGAER--ASSMAGTKPYMAP-EVFQVYM 196

Query: 93  EAHPG 97
           +  PG
Sbjct: 197 DRGPG 201


>gi|120953264 folliculin interacting protein 1 isoform 2 [Homo
           sapiens]
          Length = 1138

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 89  SELQEAHPGEPQEDRGISMEGLYSSTQDQQLCAAELQENGSVMKEDLPSPSSFTIQHSKA 148
           SELQE H  E  ED  I M G   +T    L   E++E+  V+     + SS   + S+ 
Sbjct: 518 SELQETHLLENGEDEAIVMPGTVITT---TLEKGEIEESEYVLVTMHRNKSSLLFKESEE 574

Query: 149 FSTTKYSC 156
             T   +C
Sbjct: 575 IRTPNCNC 582


>gi|120953291 folliculin interacting protein 1 isoform 1 [Homo
           sapiens]
          Length = 1166

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 89  SELQEAHPGEPQEDRGISMEGLYSSTQDQQLCAAELQENGSVMKEDLPSPSSFTIQHSKA 148
           SELQE H  E  ED  I M G   +T    L   E++E+  V+     + SS   + S+ 
Sbjct: 546 SELQETHLLENGEDEAIVMPGTVITT---TLEKGEIEESEYVLVTMHRNKSSLLFKESEE 602

Query: 149 FSTTKYSC 156
             T   +C
Sbjct: 603 IRTPNCNC 610


>gi|4505785 phosphorylase kinase, gamma 2 (testis) [Homo sapiens]
          Length = 406

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 36  VHEYLRPENDLYATQLNTHEYDF-VSVYTIKGEET-SLASVQSEDRGYLLPDEIYSELQE 93
           VH  L+PEN L    +     DF  S +   GE+   L        GYL P+ +   + E
Sbjct: 150 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTP----GYLAPEILKCSMDE 205

Query: 94  AHPGEPQE 101
            HPG  +E
Sbjct: 206 THPGYGKE 213


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.131    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,210,118
Number of Sequences: 37866
Number of extensions: 749552
Number of successful extensions: 1505
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 35
length of query: 410
length of database: 18,247,518
effective HSP length: 105
effective length of query: 305
effective length of database: 14,271,588
effective search space: 4352834340
effective search space used: 4352834340
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press