Guide to the Human Genome
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Name: ARL17P1 Sequence: fasta or formatted (125aa) NCBI GI: 166064001
Description:

hypothetical protein LOC51326 isoform b

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [177aa] hypothetical protein LOC51326 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8          6           1
 C cysteine            1.6          2           1
 D aspartate           3.2          4           1
 E glutamate           4.8          6           1
 F phenylalanine       7.2          9           2
 G glycine             7.2          9           1
 H histidine           2.4          3           1
 I isoleucine          4.8          6           1
 K lysine             10.4         13           3
 L leucine            12.0         15           2
 M methionine          1.6          2           1
 N asparagine          4.0          5           2
 P proline             4.0          5           1
 Q glutamine           3.2          4           1
 R arginine            2.4          3           1
 S serine              7.2          9           1
 T threonine           8.8         11           2
 V valine              6.4          8           1
 W tryptophan          1.6          2           1
 Y tyrosine            2.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC51326 isoform b 
ARL17                 1.000   ADP-ribosylation factor-like 17 isoform b 
LOC100294341          0.991   PREDICTED: similar to ADP-ribosylation factor-like ...
ARL17                 0.667   ADP-ribosylation factor-like 17 isoform a 
ARL17P1               0.667   hypothetical protein LOC51326 isoform a 
ARF1                  0.472   ADP-ribosylation factor 1 
ARF1                  0.472   ADP-ribosylation factor 1 
ARF1                  0.472   ADP-ribosylation factor 1 
ARF1                  0.472   ADP-ribosylation factor 1 
ARF3                  0.468   ADP-ribosylation factor 3 
ARF4                  0.420   ADP-ribosylation factor 4 
ARF5                  0.420   ADP-ribosylation factor 5 
ARF6                  0.368   ADP-ribosylation factor 6 
ARL1                  0.355   ADP-ribosylation factor-like 1 
TRIM23                0.299   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.299   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.299   ADP-ribosylation factor domain protein 1 isoform alph...
ARL14                 0.221   ADP-ribosylation factor-like 14 
ARL5B                 0.212   ADP-ribosylation factor-like 8 
ARL5A                 0.195   ADP-ribosylation factor-like 5A isoform 1 
ARL4C                 0.195   ADP-ribosylation factor-like 4C 
ARL4D                 0.186   ADP-ribosylation factor-like 4D 
ARL3                  0.182   ADP-ribosylation factor-like 3 
ARL4A                 0.182   ADP-ribosylation factor-like 4A 
ARL4A                 0.182   ADP-ribosylation factor-like 4A 
ARL4A                 0.182   ADP-ribosylation factor-like 4A 
ARL2                  0.173   ADP-ribosylation factor-like 2 
ARL11                 0.156   ADP-ribosylation factor-like 11 
ARL5C                 0.147   ADP-ribosylation factor-like 5C 
ARL6                  0.143   ADP-ribosylation factor-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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