Guide to the Human Genome
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Name: ARF1 Sequence: fasta or formatted (181aa) NCBI GI: 4502201
Description:

ADP-ribosylation factor 1

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt mRNA [181aa] ADP-ribosylation factor 1
alt mRNA [181aa] ADP-ribosylation factor 1
alt mRNA [181aa] ADP-ribosylation factor 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         12           2
 C cysteine            0.6          1           1
 D aspartate           6.1         11           1
 E glutamate           6.6         12           2
 F phenylalanine       4.4          8           1
 G glycine             7.7         14           2
 H histidine           1.7          3           1
 I isoleucine          6.1         11           1
 K lysine              6.1         11           2
 L leucine            12.2         22           2
 M methionine          3.3          6           1
 N asparagine          7.2         13           1
 P proline             1.7          3           1
 Q glutamine           3.9          7           1
 R arginine            6.1         11           1
 S serine              2.8          5           1
 T threonine           6.1         11           2
 V valine              6.1         11           2
 W tryptophan          2.2          4           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor 1 
ARF1                  1.000   ADP-ribosylation factor 1 
ARF1                  1.000   ADP-ribosylation factor 1 
ARF1                  1.000   ADP-ribosylation factor 1 
ARF3                  0.965   ADP-ribosylation factor 3 
ARF4                  0.804   ADP-ribosylation factor 4 
ARF5                  0.801   ADP-ribosylation factor 5 
ARF6                  0.684   ADP-ribosylation factor 6 
ARL1                  0.573   ADP-ribosylation factor-like 1 
TRIM23                0.558   ADP-ribosylation factor domain protein 1 isoform alph...
TRIM23                0.482   ADP-ribosylation factor domain protein 1 isoform bet...
ARL5B                 0.465   ADP-ribosylation factor-like 8 
ARL5A                 0.465   ADP-ribosylation factor-like 5A isoform 1 
TRIM23                0.459   ADP-ribosylation factor domain protein 1 isoform gam...
ARL2                  0.424   ADP-ribosylation factor-like 2 
ARL14                 0.409   ADP-ribosylation factor-like 14 
ARL3                  0.398   ADP-ribosylation factor-like 3 
ARL4C                 0.389   ADP-ribosylation factor-like 4C 
ARL5A                 0.365   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.365   ADP-ribosylation factor-like 5A isoform 2 
ARL5C                 0.365   ADP-ribosylation factor-like 5C 
ARL4A                 0.365   ADP-ribosylation factor-like 4A 
ARL4A                 0.365   ADP-ribosylation factor-like 4A 
ARL4A                 0.365   ADP-ribosylation factor-like 4A 
ARL4D                 0.342   ADP-ribosylation factor-like 4D 
ARL6                  0.342   ADP-ribosylation factor-like 6 
ARL6                  0.342   ADP-ribosylation factor-like 6 
ARL11                 0.322   ADP-ribosylation factor-like 11 
ARL17                 0.322   ADP-ribosylation factor-like 17 isoform a 
ARL17P1               0.322   hypothetical protein LOC51326 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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