Guide to the Human Genome
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Name: ARL4C Sequence: fasta or formatted (192aa) NCBI GI: 6552296
Description:

ADP-ribosylation factor-like 4C

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         11           1
 C cysteine            1.6          3           1
 D aspartate           4.2          8           1
 E glutamate           6.8         13           2
 F phenylalanine       3.1          6           1
 G glycine             6.8         13           2
 H histidine           2.6          5           1
 I isoleucine          7.3         14           2
 K lysine             10.4         20           3
 L leucine            10.9         21           2
 M methionine          2.1          4           1
 N asparagine          4.2          8           1
 P proline             3.6          7           1
 Q glutamine           3.6          7           1
 R arginine            3.6          7           2
 S serine              6.2         12           2
 T threonine           6.8         13           2
 V valine              6.8         13           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 4C 
ARL4A                 0.719   ADP-ribosylation factor-like 4A 
ARL4A                 0.719   ADP-ribosylation factor-like 4A 
ARL4A                 0.719   ADP-ribosylation factor-like 4A 
ARL4D                 0.585   ADP-ribosylation factor-like 4D 
ARF6                  0.379   ADP-ribosylation factor 6 
ARF3                  0.373   ADP-ribosylation factor 3 
ARF1                  0.370   ADP-ribosylation factor 1 
ARF1                  0.370   ADP-ribosylation factor 1 
ARF1                  0.370   ADP-ribosylation factor 1 
ARF1                  0.370   ADP-ribosylation factor 1 
ARF5                  0.368   ADP-ribosylation factor 5 
ARL14                 0.368   ADP-ribosylation factor-like 14 
ARF4                  0.357   ADP-ribosylation factor 4 
TRIM23                0.318   ADP-ribosylation factor domain protein 1 isoform alph...
ARL11                 0.312   ADP-ribosylation factor-like 11 
ARL5B                 0.290   ADP-ribosylation factor-like 8 
TRIM23                0.290   ADP-ribosylation factor domain protein 1 isoform bet...
ARL1                  0.287   ADP-ribosylation factor-like 1 
ARL5A                 0.284   ADP-ribosylation factor-like 5A isoform 1 
TRIM23                0.279   ADP-ribosylation factor domain protein 1 isoform gam...
ARL3                  0.279   ADP-ribosylation factor-like 3 
ARL2                  0.256   ADP-ribosylation factor-like 2 
ARL5C                 0.220   ADP-ribosylation factor-like 5C 
ARL5A                 0.214   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.214   ADP-ribosylation factor-like 5A isoform 2 
ARL8A                 0.212   ADP-ribosylation factor-like 8A 
ARL6                  0.206   ADP-ribosylation factor-like 6 
ARL6                  0.206   ADP-ribosylation factor-like 6 
ARL8B                 0.206   ADP-ribosylation factor-like 10C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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