Guide to the Human Genome
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Name: ARL4A Sequence: fasta or formatted (200aa) NCBI GI: 47078227
Description:

ADP-ribosylation factor-like 4A

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt mRNA [200aa] ADP-ribosylation factor-like 4A
alt mRNA [200aa] ADP-ribosylation factor-like 4A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5          5           1
 C cysteine            1.5          3           1
 D aspartate           4.5          9           1
 E glutamate           6.5         13           2
 F phenylalanine       4.0          8           1
 G glycine             7.0         14           2
 H histidine           2.5          5           1
 I isoleucine          6.5         13           2
 K lysine              9.0         18           3
 L leucine            11.5         23           2
 M methionine          2.5          5           1
 N asparagine          4.5          9           1
 P proline             3.0          6           1
 Q glutamine           4.5          9           2
 R arginine            5.0         10           2
 S serine              7.5         15           3
 T threonine           7.5         15           2
 V valine              7.5         15           2
 W tryptophan          1.5          3           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 4A 
ARL4A                 1.000   ADP-ribosylation factor-like 4A 
ARL4A                 1.000   ADP-ribosylation factor-like 4A 
ARL4C                 0.686   ADP-ribosylation factor-like 4C 
ARL4D                 0.598   ADP-ribosylation factor-like 4D 
ARF4                  0.348   ADP-ribosylation factor 4 
ARF6                  0.340   ADP-ribosylation factor 6 
ARF3                  0.338   ADP-ribosylation factor 3 
ARF5                  0.338   ADP-ribosylation factor 5 
ARF1                  0.332   ADP-ribosylation factor 1 
ARF1                  0.332   ADP-ribosylation factor 1 
ARF1                  0.332   ADP-ribosylation factor 1 
ARF1                  0.332   ADP-ribosylation factor 1 
ARL14                 0.330   ADP-ribosylation factor-like 14 
ARL5B                 0.298   ADP-ribosylation factor-like 8 
TRIM23                0.293   ADP-ribosylation factor domain protein 1 isoform alph...
ARL5A                 0.274   ADP-ribosylation factor-like 5A isoform 1 
ARL1                  0.271   ADP-ribosylation factor-like 1 
TRIM23                0.269   ADP-ribosylation factor domain protein 1 isoform bet...
ARL11                 0.263   ADP-ribosylation factor-like 11 
TRIM23                0.253   ADP-ribosylation factor domain protein 1 isoform gam...
ARL3                  0.247   ADP-ribosylation factor-like 3 
ARL6                  0.237   ADP-ribosylation factor-like 6 
ARL6                  0.237   ADP-ribosylation factor-like 6 
ARL2                  0.226   ADP-ribosylation factor-like 2 
ARL5C                 0.221   ADP-ribosylation factor-like 5C 
ARL5A                 0.205   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.205   ADP-ribosylation factor-like 5A isoform 2 
ARFRP1                0.199   ADP-ribosylation factor related protein 1 isoform a [...
ARL8A                 0.199   ADP-ribosylation factor-like 8A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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