Search of human proteins with 16506820

Search of human proteins with 16506820

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16506820 glycosyltransferase 25 domain containing 2 [Homo
sapiens]
         (626 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16506820 glycosyltransferase 25 domain containing 2 [Homo sap...  1291   0.0  
gi|31377697 glycosyltransferase 25 domain containing 1 [Homo sap...   840   0.0  
gi|193788560 cerebral endothelial cell adhesion molecule 1 [Homo...   639   0.0  
gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr...    99   2e-20
gi|62739166 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i...    98   2e-20
gi|33636742 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i...    89   9e-18
gi|32307144 lysyl hydroxylase 1 precursor [Homo sapiens]               89   2e-17
gi|93102379 low density lipoprotein-related protein 1B precursor...    32   1.3  
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]             32   1.3  
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]             32   1.3  
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]             32   1.3  
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]             32   1.3  
gi|42741655 met proto-oncogene isoform b precursor [Homo sapiens]      31   3.0  
gi|188595716 met proto-oncogene isoform a precursor [Homo sapiens]     31   3.0  
gi|239755822 PREDICTED: hypothetical protein [Homo sapiens]            31   3.0  
gi|239750319 PREDICTED: hypothetical protein [Homo sapiens]            31   3.0  
gi|239744623 PREDICTED: hypothetical protein [Homo sapiens]            31   3.0  
gi|119220575 mediator complex subunit 24 isoform 2 [Homo sapiens]      31   3.9  
gi|41281496 mediator complex subunit 24 isoform 1 [Homo sapiens]       31   3.9  
gi|31712030 ancient ubiquitous protein 1 [Homo sapiens]                30   5.1  
gi|32313593 olfactomedin 4 precursor [Homo sapiens]                    30   5.1  
gi|11386139 phospholipase C beta 3 [Homo sapiens]                      30   6.7  
gi|5730081 T-box, brain, 1 [Homo sapiens]                              30   6.7  

>gi|16506820 glycosyltransferase 25 domain containing 2 [Homo
           sapiens]
          Length = 626

 Score = 1291 bits (3342), Expect = 0.0
 Identities = 626/626 (100%), Positives = 626/626 (100%)

Query: 1   MAARPAATLAWSLLLLSSALLREGCRARFVAERDSEDDGEEPVVFPESPLQSPTVLVAVL 60
           MAARPAATLAWSLLLLSSALLREGCRARFVAERDSEDDGEEPVVFPESPLQSPTVLVAVL
Sbjct: 1   MAARPAATLAWSLLLLSSALLREGCRARFVAERDSEDDGEEPVVFPESPLQSPTVLVAVL 60

Query: 61  ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRP 120
           ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRP
Sbjct: 61  ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRP 120

Query: 121 MDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNL 180
           MDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNL
Sbjct: 121 MDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNL 180

Query: 181 LIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFL 240
           LIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFL
Sbjct: 181 LIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFL 240

Query: 241 IDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKPHQ 300
           IDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKPHQ
Sbjct: 241 IDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKPHQ 300

Query: 301 TLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML 360
           TLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
Sbjct: 301 TLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML 360

Query: 361 RTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV 420
           RTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV
Sbjct: 361 RTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV 420

Query: 421 WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWELIYIGRKRMQVKEPEK 480
           WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWELIYIGRKRMQVKEPEK
Sbjct: 421 WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWELIYIGRKRMQVKEPEK 480

Query: 481 AVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPVMYNKHPVAEYKE 540
           AVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPVMYNKHPVAEYKE
Sbjct: 481 AVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPVMYNKHPVAEYKE 540

Query: 541 YYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQSR 600
           YYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQSR
Sbjct: 541 YYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQSR 600

Query: 601 IYSNAKNTEALPPPTSLDTVPSRDEL 626
           IYSNAKNTEALPPPTSLDTVPSRDEL
Sbjct: 601 IYSNAKNTEALPPPTSLDTVPSRDEL 626


>gi|31377697 glycosyltransferase 25 domain containing 1 [Homo
           sapiens]
          Length = 622

 Score =  840 bits (2169), Expect = 0.0
 Identities = 388/581 (66%), Positives = 477/581 (82%), Gaps = 3/581 (0%)

Query: 46  PESPLQSPTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREW 105
           PESPLQ+P VL+A+LARNAAH LP  LG LERL +P+ R A+W ATDHN+DNT+ + REW
Sbjct: 45  PESPLQAPRVLIALLARNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREW 104

Query: 106 LKNVQRLYHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILF 165
           L  V+ LYH VEWRP +EP SYPDE GPKHW  SR+ HVMKLRQAAL++AR+ W+DYILF
Sbjct: 105 LVAVKSLYHSVEWRPAEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILF 164

Query: 166 IDVDNFLTNPQTLNLLIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWK 225
           +D DN + NP TL+LLIAENKT+VAPML+SR  YSNFWCG+T +G+YKRTP Y+ IR+  
Sbjct: 165 VDADNLILNPDTLSLLIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRD 224

Query: 226 RTGCFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCN 285
           R GCF VPMVHSTFLIDLRK AS  L FYPPH DYTW+FDDIIVFAFS +QA +QMY+CN
Sbjct: 225 RRGCFAVPMVHSTFLIDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCN 284

Query: 286 REHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIF 345
           +E YG+LP+PL+ H TLQ++ E+ +HVQ+E M+  PP EPS+++S   K PDKMGFDE+F
Sbjct: 285 KEEYGFLPVPLRAHSTLQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVF 344

Query: 346 MINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRP 405
           MINL+RR+DRR+RMLR L  QEIE ++VEAVDGKA+NTSQ++AL I+MLPGYRDPY  RP
Sbjct: 345 MINLRRRQDRRERMLRALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRP 404

Query: 406 LTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWEL 465
           LT+GE+GCFLSHY++WKEV+DR L+K+LV EDD+RFE  FK++LM LM ++++  LDW+L
Sbjct: 405 LTKGELGCFLSHYNIWKEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDL 464

Query: 466 IYIGRKRMQVKEPEKAVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEF 525
           IY+GRKRMQV+ PEKAVP V NLVEADYSYWTL YVISL+GA+KL+ A P  KMLPVDEF
Sbjct: 465 IYVGRKRMQVEHPEKAVPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEF 524

Query: 526 LPVMYNKHPVAEYKEYYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVAT 585
           LPVM++KHPV+EYK ++  R+L AFS EPLLIYPTHYTG  GY+SDTETS +W+NE V T
Sbjct: 525 LPVMFDKHPVSEYKAHFSLRNLHAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKT 584

Query: 586 DWDRTHAWKSRKQSRIYSNAKNTEALPPPTSLDTVPSRDEL 626
           DWDR  + K R+Q  +   AKN++ L  P  LD+  +RDEL
Sbjct: 585 DWDRAKSQKMREQQALSREAKNSDVLQSP--LDSA-ARDEL 622


>gi|193788560 cerebral endothelial cell adhesion molecule 1 [Homo
           sapiens]
          Length = 595

 Score =  639 bits (1647), Expect = 0.0
 Identities = 297/536 (55%), Positives = 399/536 (74%), Gaps = 3/536 (0%)

Query: 47  ESPLQSPTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWL 106
           ESPL  P V++A+LARNA H+LPH+LG LERLDYP++RMA+W ATDHNVDNTTE+ +EWL
Sbjct: 27  ESPL--PAVVLAILARNAEHSLPHYLGALERLDYPRARMALWCATDHNVDNTTEMLQEWL 84

Query: 107 KNVQRLYHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFI 166
             V   Y  V WRP  EP  YPDE GPKHW   R   +M+L+Q AL  AR   +DYILF 
Sbjct: 85  AAVGDDYAAVVWRPEGEPRFYPDEEGPKHWTKERHQFLMELKQEALTFARNWGADYILFA 144

Query: 167 DVDNFLTNPQTLNLLIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKR 226
           D DN LTN QTL LL+ +   +VAPML+S+  YSNFWCGITP+G+Y+RT +Y   +  +R
Sbjct: 145 DTDNILTNNQTLRLLMGQGLPVVAPMLDSQTYYSNFWCGITPQGYYRRTAEYFPTKNRQR 204

Query: 227 TGCFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNR 286
            GCF VPMVHSTFL  LR E +D+L FYPPH +YTW FDDIIVFA++ + AG+ +++CN 
Sbjct: 205 RGCFRVPMVHSTFLASLRAEGADQLAFYPPHPNYTWPFDDIIVFAYACQAAGVSVHVCNE 264

Query: 287 EHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFM 346
             YGY+ +P+K HQ L+++  N IH+ +EA++D P M+ S +V+   K P K+GFDE+F+
Sbjct: 265 HRYGYMNVPVKSHQGLEDERVNFIHLILEALVDGPRMQASAHVTRPSKRPSKIGFDEVFV 324

Query: 347 INLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPL 406
           I+L RR DRR+RML +L+E EI  ++V+AVDG  LN+S ++ L +++LPGY+DPYS R L
Sbjct: 325 ISLARRPDRRERMLASLWEMEISGRVVDAVDGWMLNSSAIRNLGVDLLPGYQDPYSGRTL 384

Query: 407 TRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWELI 466
           T+GE+GCFLSHYS+W+EV+ R L + LV EDDVRFE  F+ +L +LM++++  +L W+LI
Sbjct: 385 TKGEVGCFLSHYSIWEEVVARGLARVLVFEDDVRFESNFRGRLERLMEDVEAEKLSWDLI 444

Query: 467 YIGRKRMQVKEPEKAVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFL 526
           Y+GRK++   E E AV  +  LV A YSYWTL Y + L GA+KL+ + P  +MLPVDEFL
Sbjct: 445 YLGRKQVN-PEKETAVEGLPGLVVAGYSYWTLAYALRLAGARKLLASQPLRRMLPVDEFL 503

Query: 527 PVMYNKHPVAEYKEYYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNET 582
           P+M+++HP  +YK ++  RDL AFSA+PLL  PTHY G   +LSDTETS+ WD+++
Sbjct: 504 PIMFDQHPNEQYKAHFWPRDLVAFSAQPLLAAPTHYAGDAEWLSDTETSSPWDDDS 559


>gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
           precursor [Homo sapiens]
          Length = 738

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 35/281 (12%)

Query: 53  PTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRL 112
           P V +AV        LP FL  L  LDYP  R+ ++    HN     E+F E        
Sbjct: 296 PRVFLAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFL---HN----NEVFHE-------- 340

Query: 113 YHYVE-WRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNF 171
            H  + W  + +  S    +GP+   +   A  M +        ++   ++   +D D  
Sbjct: 341 PHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCR----QDPECEFYFSLDADAV 396

Query: 172 LTNPQTLNLLIAENKTIVAPMLESRG-LYSNFWCGITPKGFYKRTPDYVQIREWKRTGCF 230
           LTN QTL +LI EN+ ++APML   G L+SNFW  ++P  +Y R+ DYV++ + KR G +
Sbjct: 397 LTNLQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVW 456

Query: 231 PVPMVHSTFLIDLRKEASDKLTFYPPHQDY--TWTFDDIIVFAFSSRQAGIQMYLCNREH 288
            VP +   ++I       D L    P +D       D  + F  S R  GI ++L N+  
Sbjct: 457 NVPYISQAYVI-----RGDTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIFLHLSNQHE 511

Query: 289 YGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYV 329
           +G L        T + D E+L H  +  + D P     QY+
Sbjct: 512 FGRL------LATSRYDTEHL-HPDLWQIFDNPVDWKEQYI 545


>gi|62739166 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
           isoform b precursor [Homo sapiens]
          Length = 737

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 40/250 (16%)

Query: 53  PTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRL 112
           P V + V        LP FL  L  LDYPK  + ++    HN     E++ E  K+++  
Sbjct: 296 PNVSIGVFIEQPTPFLPRFLDILLTLDYPKEALKLFI---HN----KEVYHE--KDIKVF 346

Query: 113 YHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTA------REKWSDYILFI 166
           +   +          P+E                L QA  R        +++  DY   +
Sbjct: 347 FDKAKHEIKTIKIVGPEE---------------NLSQAEARNMGMDFCRQDEKCDYYFSV 391

Query: 167 DVDNFLTNPQTLNLLIAENKTIVAPMLESRG-LYSNFWCGITPKGFYKRTPDYVQIREWK 225
           D D  LTNP+TL +LI +N+ I+AP++   G L+SNFW  ++P G+Y R+ DYV I +  
Sbjct: 392 DADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGN 451

Query: 226 RTGCFPVPMVHSTFLI---DLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMY 282
           R G + VP + + +LI    LR E +++  F           D  +    ++R+ G+ MY
Sbjct: 452 RVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRD------KLDPDMALCRNAREMGVFMY 505

Query: 283 LCNREHYGYL 292
           + NR  +G L
Sbjct: 506 ISNRHEFGRL 515


>gi|33636742 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
           isoform a precursor [Homo sapiens]
          Length = 758

 Score = 89.4 bits (220), Expect = 9e-18
 Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 49/265 (18%)

Query: 53  PTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRL 112
           P V + V        LP FL  L  LDYPK  + ++    HN     E++ E  K+++  
Sbjct: 296 PNVSIGVFIEQPTPFLPRFLDILLTLDYPKEALKLFI---HN----KEVYHE--KDIKVF 346

Query: 113 YHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTA------REKWSDYILFI 166
           +   +          P+E                L QA  R        +++  DY   +
Sbjct: 347 FDKAKHEIKTIKIVGPEE---------------NLSQAEARNMGMDFCRQDEKCDYYFSV 391

Query: 167 DVDNFLTNPQTLNLLIAENKTIVAPMLESRG-LYSNFWCGITPKGFYKRTPDYVQIREWK 225
           D D  LTNP+TL +LI +N+ I+AP++   G L+SNFW  ++P G+Y R+ DYV I +  
Sbjct: 392 DADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGN 451

Query: 226 RTGCFPVPMVHSTFLI---DLRKEASDKLTFYPPHQDYTWTF---------------DDI 267
           R G + VP + + +LI    LR E +++  F     D                       
Sbjct: 452 RVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMTLQREKDSPTP 511

Query: 268 IVFAFSSRQAGIQMYLCNREHYGYL 292
             F   S   G+ MY+ NR  +G L
Sbjct: 512 ETFQMLSPPKGVFMYISNRHEFGRL 536


>gi|32307144 lysyl hydroxylase 1 precursor [Homo sapiens]
          Length = 727

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 28/244 (11%)

Query: 53  PTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRL 112
           PTVLV V        +  F   L RL YP+  M ++   +H   +  ++  E+L      
Sbjct: 286 PTVLVGVFIEQPTPFVSLFFQRLLRLHYPQKHMRLFIH-NHEQHHKAQV-EEFLAQHGSE 343

Query: 113 YHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFL 172
           Y  V+             +GP+     R A+       A    +++   Y   +D D  L
Sbjct: 344 YQSVKL------------VGPE----VRMANADARNMGADLCRQDRSCTYYFSVDADVAL 387

Query: 173 TNPQTLNLLIAENKTIVAPMLESRG-LYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFP 231
           T P +L LLI +NK ++AP++   G L+SNFW  ++  G+Y R+ DYV I + +R G + 
Sbjct: 388 TEPNSLRLLIQQNKNVIAPLMTRHGRLWSNFWGALSADGYYARSEDYVDIVQGRRVGVWN 447

Query: 232 VPMVHSTFLID---LRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREH 288
           VP + + +LI    LR E      F+          D  + F  + RQ  + M+L NR  
Sbjct: 448 VPYISNIYLIKGSALRGELQSSDLFHHS------KLDPDMAFCANIRQQDVFMFLTNRHT 501

Query: 289 YGYL 292
            G+L
Sbjct: 502 LGHL 505


>gi|93102379 low density lipoprotein-related protein 1B precursor
            [Homo sapiens]
          Length = 4599

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 11/71 (15%)

Query: 476  KEPEKAVPNVANL-VEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPVMYNKHP 534
            K P + +P V  L +  DY YWT G   SL  A K  GA          + L ++Y+ H 
Sbjct: 3208 KVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGA----------DRLSLIYSWHA 3257

Query: 535  VAEYKEYYESR 545
            + + + Y+  R
Sbjct: 3258 ITDIQVYHSYR 3268


>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
          Length = 338

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 350 KRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSR----- 404
           +R+K ++ + L+   +++ E + VEA+ G +L+     A   E  P   D   SR     
Sbjct: 215 RRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK 274

Query: 405 PLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDD 438
           P+T+ E   + +  S+ ++V+D E  +T +I+ D
Sbjct: 275 PMTKEE---WDARQSIIRKVVDPETGRTRLIKGD 305


>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
          Length = 352

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 350 KRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSR----- 404
           +R+K ++ + L+   +++ E + VEA+ G +L+     A   E  P   D   SR     
Sbjct: 226 RRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK 285

Query: 405 PLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDD 438
           P+T+ E   + +  S+ ++V+D E  +T +I+ D
Sbjct: 286 PMTKEE---WDARQSIIRKVVDPETGRTRLIKGD 316


>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
          Length = 341

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 350 KRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSR----- 404
           +R+K ++ + L+   +++ E + VEA+ G +L+     A   E  P   D   SR     
Sbjct: 215 RRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK 274

Query: 405 PLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDD 438
           P+T+ E   + +  S+ ++V+D E  +T +I+ D
Sbjct: 275 PMTKEE---WDARQSIIRKVVDPETGRTRLIKGD 305


>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
          Length = 360

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 350 KRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSR----- 404
           +R+K ++ + L+   +++ E + VEA+ G +L+     A   E  P   D   SR     
Sbjct: 234 RRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK 293

Query: 405 PLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDD 438
           P+T+ E   + +  S+ ++V+D E  +T +I+ D
Sbjct: 294 PMTKEE---WDARQSIIRKVVDPETGRTRLIKGD 324


>gi|42741655 met proto-oncogene isoform b precursor [Homo sapiens]
          Length = 1390

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 15/161 (9%)

Query: 280 QMYLCNREHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYVS-----VVPK 334
           Q+  C   + G     + PH     DI++ +H      I+ P   P   VS     V+  
Sbjct: 129 QLISCGSVNRGTCQRHVFPHNHTA-DIQSEVHCIFSPQIEEPSQCPDCVVSALGAKVLSS 187

Query: 335 YPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEML 394
             D+  F   F+ N        D  L ++  + ++    E  DG    T Q     I++L
Sbjct: 188 VKDR--FINFFVGNTINSSYFPDHPLHSISVRRLK----ETKDGFMFLTDQSY---IDVL 238

Query: 395 PGYRDPYSSRPLTRGEIGCFLSHYSVWKEVIDRELEKTLVI 435
           P +RD Y  + +   E   F+   +V +E +D +   T +I
Sbjct: 239 PEFRDSYPIKYVHAFESNNFIYFLTVQRETLDAQTFHTRII 279


>gi|188595716 met proto-oncogene isoform a precursor [Homo sapiens]
          Length = 1408

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 15/161 (9%)

Query: 280 QMYLCNREHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYVS-----VVPK 334
           Q+  C   + G     + PH     DI++ +H      I+ P   P   VS     V+  
Sbjct: 129 QLISCGSVNRGTCQRHVFPHNHTA-DIQSEVHCIFSPQIEEPSQCPDCVVSALGAKVLSS 187

Query: 335 YPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEML 394
             D+  F   F+ N        D  L ++  + ++    E  DG    T Q     I++L
Sbjct: 188 VKDR--FINFFVGNTINSSYFPDHPLHSISVRRLK----ETKDGFMFLTDQSY---IDVL 238

Query: 395 PGYRDPYSSRPLTRGEIGCFLSHYSVWKEVIDRELEKTLVI 435
           P +RD Y  + +   E   F+   +V +E +D +   T +I
Sbjct: 239 PEFRDSYPIKYVHAFESNNFIYFLTVQRETLDAQTFHTRII 279


>gi|239755822 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 612

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 32  ERDSE---DDGEEPVVFPESPLQSPTVLVAVLARNAAHTLPHFLGCL 75
           ERD +   +D ++   FP   +Q P  +V VL       LPH LG L
Sbjct: 201 ERDGKCLSEDEQQAAPFPHDAVQLPPEVVDVLLEQRLQVLPHSLGAL 247


>gi|239750319 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 612

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 32  ERDSE---DDGEEPVVFPESPLQSPTVLVAVLARNAAHTLPHFLGCL 75
           ERD +   +D ++   FP   +Q P  +V VL       LPH LG L
Sbjct: 201 ERDGKCLSEDEQQAAPFPHDAVQLPPEVVDVLLEQRLQVLPHSLGAL 247


>gi|239744623 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 612

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 32  ERDSE---DDGEEPVVFPESPLQSPTVLVAVLARNAAHTLPHFLGCL 75
           ERD +   +D ++   FP   +Q P  +V VL       LPH LG L
Sbjct: 201 ERDGKCLSEDEQQAAPFPHDAVQLPPEVVDVLLEQRLQVLPHSLGAL 247


>gi|119220575 mediator complex subunit 24 isoform 2 [Homo sapiens]
          Length = 976

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 144 VMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLL 181
           V+ L+QA L+  +E+WSDY   I++  F     T ++L
Sbjct: 3   VVNLKQAILQAWKERWSDYQWAINMKKFFPKGATWDIL 40


>gi|41281496 mediator complex subunit 24 isoform 1 [Homo sapiens]
          Length = 989

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 144 VMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLL 181
           V+ L+QA L+  +E+WSDY   I++  F     T ++L
Sbjct: 3   VVNLKQAILQAWKERWSDYQWAINMKKFFPKGATWDIL 40


>gi|31712030 ancient ubiquitous protein 1 [Homo sapiens]
          Length = 410

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 45  FPESPLQSPTVLVAVLARNAAHTLPHF-LGCLER 77
           FP SP  SP V +A LA+     LPH  LG ++R
Sbjct: 285 FPPSPGPSPDVQLATLAQRVKEVLPHVPLGVIQR 318


>gi|32313593 olfactomedin 4 precursor [Homo sapiens]
          Length = 510

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 18/91 (19%)

Query: 400 PYSSRPLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLM------ 453
           P ++ P+ R E   F +H  V  +  ++EL K   + + V+    ++KKL+ L       
Sbjct: 90  PDTTFPVDRVERLEFTAH--VLSQKFEKELSK---VREYVQLISVYEKKLLNLTVRIDIM 144

Query: 454 --DNIDQAQLDWELIYIGRKRMQVKEPEKAV 482
             D I   +LD+ELI     +++VKE EK V
Sbjct: 145 EKDTISYTELDFELI-----KVEVKEMEKLV 170


>gi|11386139 phospholipase C beta 3 [Homo sapiens]
          Length = 1234

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 297 KPHQTLQEDIENLIHVQIEAMIDR---PPMEPSQYVSVVPKYPDKMGF---DEIFMINLK 350
           KP+ TL++ ++ +   Q +  ++    PP+ PSQ   ++ KY     F   D++ M    
Sbjct: 238 KPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFS 297

Query: 351 RRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGE 410
           R     +  +  L   ++   + + +    +N+S    L    L G     SS  + R  
Sbjct: 298 RYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAG----TSSVEMYRQA 353

Query: 411 I--GCFLSHYSVWK 422
           +  GC      VWK
Sbjct: 354 LLWGCRCVELDVWK 367


>gi|5730081 T-box, brain, 1 [Homo sapiens]
          Length = 682

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 11/58 (18%)

Query: 254 YPPHQDYTWTFDDIIVFAFSSRQAGI-----QMYLCNREHYGYLPIPLKPHQTLQEDI 306
           YP  Q Y  ++     + FSS Q G+     Q+YLCNR      P+ LK H+   E I
Sbjct: 174 YPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNR------PLWLKFHRHQTEMI 225


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,234,092
Number of Sequences: 37866
Number of extensions: 1144217
Number of successful extensions: 2746
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2718
Number of HSP's gapped (non-prelim): 30
length of query: 626
length of database: 18,247,518
effective HSP length: 108
effective length of query: 518
effective length of database: 14,157,990
effective search space: 7333838820
effective search space used: 7333838820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.