Guide to the Human Genome
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Name: MET Sequence: fasta or formatted (1390aa) NCBI GI: 42741655
Description:

met proto-oncogene isoform b precursor

Referenced in:

Liver
Ran and Rag
Receptor Tyrosine Kinases
Semaphorins

Other entries for this name:
alt prot [1408aa] met proto-oncogene isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         64           2
 C cysteine            2.9         41           2
 D aspartate           4.7         65           2
 E glutamate           5.2         72           2
 F phenylalanine       5.0         70           2
 G glycine             5.8         80           2
 H histidine           3.3         46           2
 I isoleucine          6.0         83           3
 K lysine              5.6         78           2
 L leucine             9.6        134           5
 M methionine          2.2         30           1
 N asparagine          5.8         80           2
 P proline             5.2         72           2
 Q glutamine           3.6         50           2
 R arginine            4.0         56           2
 S serine              8.6        119           2
 T threonine           6.3         88           2
 V valine              7.8        108           3
 W tryptophan          0.8         11           1
 Y tyrosine            3.1         43           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   met proto-oncogene isoform b precursor 
MET                   0.996   met proto-oncogene isoform a precursor 
MST1R                 0.248   macrophage stimulating 1 receptor precursor 
MERTK                 0.078   MER receptor tyrosine kinase precursor 
AXL                   0.075   AXL receptor tyrosine kinase isoform 2 
AXL                   0.075   AXL receptor tyrosine kinase isoform 1 
TYRO3                 0.074   TYRO3 protein tyrosine kinase 
RYK                   0.066   RYK receptor-like tyrosine kinase isoform 1 
RYK                   0.066   RYK receptor-like tyrosine kinase isoform 2 
IGF1R                 0.066   insulin-like growth factor 1 receptor precursor [Homo...
INSR                  0.065   insulin receptor isoform Short precursor 
INSR                  0.065   insulin receptor isoform Long precursor 
ROS1                  0.064   proto-oncogene c-ros-1 protein precursor 
INSRR                 0.063   insulin receptor-related receptor precursor 
ERBB4                 0.062   v-erb-a erythroblastic leukemia viral oncogene homo...
ERBB4                 0.062   v-erb-a erythroblastic leukemia viral oncogene homolo...
FGFR3                 0.062   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR3                 0.062   fibroblast growth factor receptor 3 isoform 1 precurs...
FGFR3                 0.061   fibroblast growth factor receptor 3 isoform 2 precur...
FER                   0.061   fer (fps/fes related) tyrosine kinase 
FGFR1                 0.060   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.060   fibroblast growth factor receptor 1 isoform 3 precur...
FGFR1                 0.060   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.060   fibroblast growth factor receptor 1 isoform 1 precu...
ABL1                  0.060   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.060   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ABL2                  0.060   arg tyrosine kinase isoform c 
ABL2                  0.060   arg tyrosine kinase isoform b 
ABL2                  0.060   arg tyrosine kinase isoform d 
ABL2                  0.060   arg tyrosine kinase isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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