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Search of human proteins with 16445419
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16445419 secretory carrier membrane protein 3 isoform 1
[Homo sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16445419 secretory carrier membrane protein 3 isoform 1 [Homo... 708 0.0
gi|16445421 secretory carrier membrane protein 3 isoform 2 [Homo... 640 0.0
gi|116256358 secretory carrier membrane protein 1 [Homo sapiens] 354 6e-98
gi|5730031 secretory carrier membrane protein 2 [Homo sapiens] 335 3e-92
gi|20373183 secretory carrier membrane protein 5 [Homo sapiens] 229 3e-60
gi|17738287 secretory carrier membrane protein 4 [Homo sapiens] 214 9e-56
gi|56682953 epidermal growth factor receptor pathway substrate 8... 42 6e-04
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 40 0.002
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 40 0.002
gi|158534059 formin binding protein 4 [Homo sapiens] 40 0.004
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 39 0.007
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 39 0.007
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 39 0.007
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 39 0.007
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.007
gi|61966923 forkhead box B2 [Homo sapiens] 39 0.007
gi|40807465 zinc finger protein 341 [Homo sapiens] 39 0.009
gi|24497513 homeobox A3 isoform a [Homo sapiens] 38 0.012
gi|13562112 homeobox A3 isoform a [Homo sapiens] 38 0.012
gi|5174711 T-box 1 isoform B [Homo sapiens] 38 0.012
gi|18104952 T-box 1 isoform C [Homo sapiens] 38 0.012
gi|18104950 T-box 1 isoform A [Homo sapiens] 38 0.012
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 38 0.015
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 38 0.015
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 38 0.015
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 38 0.015
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 38 0.015
>gi|16445419 secretory carrier membrane protein 3 isoform 1 [Homo
sapiens]
Length = 347
Score = 708 bits (1827), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAP 60
MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAP
Sbjct: 1 MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAP 60
Query: 61 LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL 120
LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL
Sbjct: 61 LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL 120
Query: 121 QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL 180
QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL
Sbjct: 121 QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL 180
Query: 181 NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF 240
NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF
Sbjct: 181 NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF 240
Query: 241 FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI 300
FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI
Sbjct: 241 FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI 300
Query: 301 HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 347
HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP
Sbjct: 301 HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 347
>gi|16445421 secretory carrier membrane protein 3 isoform 2 [Homo
sapiens]
Length = 321
Score = 640 bits (1650), Expect = 0.0
Identities = 321/347 (92%), Positives = 321/347 (92%), Gaps = 26/347 (7%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAP 60
MAQSRDGGNPFAEPSELDNPFQ PPPAYEPPAPAP
Sbjct: 1 MAQSRDGGNPFAEPSELDNPFQ--------------------------PPPAYEPPAPAP 34
Query: 61 LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL 120
LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL
Sbjct: 35 LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL 94
Query: 121 QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL 180
QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL
Sbjct: 95 QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL 154
Query: 181 NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF 240
NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF
Sbjct: 155 NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF 214
Query: 241 FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI 300
FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI
Sbjct: 215 FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI 274
Query: 301 HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 347
HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP
Sbjct: 275 HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 321
>gi|116256358 secretory carrier membrane protein 1 [Homo sapiens]
Length = 338
Score = 354 bits (909), Expect = 6e-98
Identities = 189/342 (55%), Positives = 233/342 (68%), Gaps = 19/342 (5%)
Query: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPS 68
NPFA+P +L+NPF+DP+V Q + LD YNPF PP P + P+ P+
Sbjct: 7 NPFADP-DLNNPFKDPSVTQVTRNVPPG-LDEYNPFSDSRTPP------PGGVKMPNVPN 58
Query: 69 LQPSRKLSPTEPKNYGSYSTQASA-AAATAELLKKQEELNRKAEELDRRERELQHAALGG 127
QP+ + PTE + +Y+ A A A AELLK+QEEL RKA ELDRRERE+Q+ + G
Sbjct: 59 TQPAI-MKPTE--EHPAYTQIAKEHALAQAELLKRQEELERKAAELDRREREMQNLSQHG 115
Query: 128 TATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLA 187
R+NNWPPLPS PV PCF+QD S++IP EFQKTV MYYLWM + L LN CLA
Sbjct: 116 ---RKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLA 172
Query: 188 SFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLF 247
FCV++ FGLSILW LLFTPCSFVCWYRP+Y AFRSDSSF FFVFFF++ Q +
Sbjct: 173 WFCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVH 232
Query: 248 VLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRT 307
VLQA G WG GWIS+L N V ++M+++A LFT AV+ +VM K++H LYR T
Sbjct: 233 VLQAAGFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTT 292
Query: 308 GASFQKAQQEFAAGVFSNPAVRTAAAN----AAAGAAENAFR 345
GASF+KAQQEFA GV SN V+TAAAN AA+ AA+NAF+
Sbjct: 293 GASFEKAQQEFATGVMSNKTVQTAAANAASTAASSAAQNAFK 334
>gi|5730031 secretory carrier membrane protein 2 [Homo sapiens]
Length = 329
Score = 335 bits (860), Expect = 3e-92
Identities = 178/333 (53%), Positives = 237/333 (71%), Gaps = 16/333 (4%)
Query: 9 NPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPS 68
NPFA+P ++ NPFQDP+V Q + Q L +NPF E A P LP S P+
Sbjct: 7 NPFADPVDV-NPFQDPSVTQLTNAPQ-GGLAEFNPFS--ETNAATTVPV-TQLPGSSQPA 61
Query: 69 -LQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGG 127
LQPS + PT+P + QA +AA A LL++QEEL+RKA EL+R+ERELQ+ +
Sbjct: 62 VLQPS--VEPTQP------TPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNT-VAN 112
Query: 128 TATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLA 187
RQNNWPPLPS+CPV+PCF+QD S EIP ++Q+ +YYLWM ++ L LN LACLA
Sbjct: 113 LHVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLA 172
Query: 188 SFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLF 247
F ++ G FGLSILW L+FTPC+F+CWYRP+YKAFRSD+SF+FFVFFF+FF Q ++
Sbjct: 173 WFSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIY 232
Query: 248 VLQAIGIPGWGFSGWISAL-VVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRR 306
++Q +GIPG G SGWI+AL + + A+SV+M++VA FT AVL + +L+R+HSLYRR
Sbjct: 233 IIQLVGIPGLGDSGWIAALSTLDNHSLAISVIMMVVAGFFTLCAVLSVFLLQRVHSLYRR 292
Query: 307 TGASFQKAQQEFAAGVFSNPAVRTAAANAAAGA 339
TGASFQ+AQ+EF+ G+FS+ AA++AA GA
Sbjct: 293 TGASFQQAQEEFSQGIFSSRTFHRAASSAAQGA 325
>gi|20373183 secretory carrier membrane protein 5 [Homo sapiens]
Length = 235
Score = 229 bits (584), Expect = 3e-60
Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 129 ATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLAS 188
A + NN+PPLP F P++PCF+QD +IP + +YYLWM +++ L +N + CLA
Sbjct: 2 AEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA- 60
Query: 189 FCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFV 248
+ + FGL+ LW++LFTPCS+VCW+RP+YKAF++DSSF+F FFF F Q V+ +
Sbjct: 61 WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120
Query: 249 LQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTG 308
+QA+GIPGWG GWI+ + N +V+ML+ ++FT +AV + L +H YR +G
Sbjct: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180
Query: 309 ASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 347
SF KAQ+E+ G + NP V+ AA NAA GAA+ A P
Sbjct: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQP 219
>gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]
Length = 229
Score = 214 bits (545), Expect = 9e-56
Identities = 102/208 (49%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
Query: 131 RQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFC 190
++NN+PPLP F PV+PCF+Q+ S EIP E Q V +Y LWM L +N +ACLA +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLA-WW 62
Query: 191 VETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQ 250
+ +G FGL+ +W+LLFTPC +VCW+RP+YKAFR+DSSFNF FFFIF Q VL V+Q
Sbjct: 63 IGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQ 122
Query: 251 AIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGAS 310
AIG GWG GW+SA+ + + +V+MLL A++F+ A + + + ++H +YR G S
Sbjct: 123 AIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAGGS 182
Query: 311 FQKAQQEFAAGVFSNPAVRTAAANAAAG 338
FQKAQ E+ G + NP R A N +G
Sbjct: 183 FQKAQTEWNTGTWRNPPSREAQYNNFSG 210
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 42.4 bits (98), Expect = 6e-04
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 41 YNPFETREPPPAYEPPAPAPLP---PPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATA 97
Y P PP PP PAP+P PPS P+ P K+ P S S+ + +
Sbjct: 613 YGPRPADTPPAPSPPPTPAPVPVPLPPSTPAPVPVSKV-PANITRQNSSSSDSGGSIVRD 671
Query: 98 ELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNW 135
KQ ++R+ +++ + EL H G + Q +
Sbjct: 672 SQRHKQLPVDRRKSQMEEVQDELIHRLTIGRSAAQKKF 709
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/70 (31%), Positives = 26/70 (37%)
Query: 48 EPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELN 107
E PPA PP P P PPP L P L P P A +T K +
Sbjct: 1405 EAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLGDPGEPAAHPGPSTGPSTKNENVAT 1464
Query: 108 RKAEELDRRE 117
L+RR+
Sbjct: 1465 LSVSSLERRK 1474
Score = 35.0 bits (79), Expect = 0.099
Identities = 32/102 (31%), Positives = 40/102 (39%), Gaps = 22/102 (21%)
Query: 43 PFETREPPPAYEPPAPAPLPPPSAPSLQPSRKL--SPTEPKNYGSYSTQASAAAATAELL 100
P + PPP PP PLPPP P+L+P+ P EP + ST S L
Sbjct: 1408 PAQPPPPPPPPPPPPQQPLPPP--PNLEPAPPSLGDPGEPAAHPGPSTGPSTKNENVATL 1465
Query: 101 KKQEELNRKAE--ELDRRE----------------RELQHAA 124
RK+ ELD + R+LQHAA
Sbjct: 1466 SVSSLERRKSRYAELDFEKIMHTRKRHQDMFQDLNRKLQHAA 1507
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 40.4 bits (93), Expect = 0.002
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 39 DVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 80
D P E+ EPPP + PP P P PPP+ P L + EP
Sbjct: 16 DGEQPAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEP 57
Score = 30.0 bits (66), Expect = 3.2
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 2 AQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEP---PAP 58
A S + EP+ P +PA P+ + AT P P PA EP AP
Sbjct: 69 ATSESATELYTEPTP--EPATEPA---SEPAPEPATEPAPEPATEPAPEPAPEPATESAP 123
Query: 59 APLPPPSAPSL-QPSRKLSP 77
P P P+ S+ +P+ +L+P
Sbjct: 124 EPTPEPALESVPEPAPELTP 143
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 15/112 (13%)
Query: 43 PFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKK 102
P + R P P P PPP P P+ K+ P E G + L+KK
Sbjct: 890 PVQARGAVPTATIIEPPPPPPPPPPPPPPAPKMPPPEKTKKGRKDKAKKSKTKMPSLVKK 949
Query: 103 QEELNRKAEELD---------------RRERELQHAALGGTATRQNNWPPLP 139
+ + R+ +E D R E Q + G A R N+ LP
Sbjct: 950 WQSIQRELDEEDNSSSSEEDRESTAQKRIEEWKQQQLVSGMAERNANFEALP 1001
Score = 29.6 bits (65), Expect = 4.2
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 43 PFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGS 85
P E PPP PP +P PPP P ++ E ++ GS
Sbjct: 708 PLEMPPPPP---PPPESPPPPPPPPPPAEDGEIQEVEMEDEGS 747
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 49 PPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 80
PPP PP P PLPPP L+ L PTEP
Sbjct: 38 PPPTPRPPPPPPLPPPGPRLLRACSLLLPTEP 69
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 49 PPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 80
PPP PP P PLPPP L+ L PTEP
Sbjct: 38 PPPTPRPPPPPPLPPPGPRLLRACSLLLPTEP 69
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 49 PPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 80
PPP PP P PLPPP L+ L PTEP
Sbjct: 38 PPPTPRPPPPPPLPPPGPRLLRACSLLLPTEP 69
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 18/142 (12%)
Query: 2 AQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAP--A 59
A SR G P A+ S +D +P+ D P E + PPP P AP
Sbjct: 1110 APSRTPGPPSAQSSPIDA----------QPATPLPQKDPAQPLEPKRPPPP-RPVAPPTR 1158
Query: 60 PLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERE 119
P PP P +R +PT K +G S A E+ + + + + R +
Sbjct: 1159 PAPPQRPPPPSGARSPAPTR-KEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPS 1217
Query: 120 LQHAALG----GTATRQNNWPP 137
Q G G +T + PP
Sbjct: 1218 PQAGLAGPGPAGYSTARPTIPP 1239
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 18/142 (12%)
Query: 2 AQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAP--A 59
A SR G P A+ S +D +P+ D P E + PPP P AP
Sbjct: 1110 APSRTPGPPSAQSSPIDA----------QPATPLPQKDPAQPLEPKRPPPP-RPVAPPTR 1158
Query: 60 PLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERE 119
P PP P +R +PT K +G S A E+ + + + + R +
Sbjct: 1159 PAPPQRPPPPSGARSPAPTR-KEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPS 1217
Query: 120 LQHAALG----GTATRQNNWPP 137
Q G G +T + PP
Sbjct: 1218 PQAGLAGPGPAGYSTARPTIPP 1239
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 47 REPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEEL 106
RE PP PP P PLPPP P L P L P P+ G + A A + Q+ L
Sbjct: 1517 REAPPL-PPPPPPPLPPPPPPPLPPPPPL-PKTPRG-GKRKHKPQAPAQPPQQSPPQQPL 1573
Query: 107 NRKAEELDRRERE 119
++ E +R+R+
Sbjct: 1574 PQEEEVKAKRQRK 1586
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 43 PFETREPPPAYEPPAPAPLPPPSAPSLQP---SRKLSPTEPKNYGSYSTQASAAAATAEL 99
P PPP PP P PLPPP P RK P P S E+
Sbjct: 1521 PLPPPPPPPLP-PPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEV 1579
Query: 100 LKKQEELNRKAE 111
K++ +R +E
Sbjct: 1580 KAKRQRKSRGSE 1591
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 38.9 bits (89), Expect = 0.007
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 45 ETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 80
E + PPP PPAP+P PP PS P L P P
Sbjct: 398 EAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPP 433
Score = 34.7 bits (78), Expect = 0.13
Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 46 TRE--PPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYS-TQASAAAATAELLKK 102
TRE PPP PP PAP PPP AP+ R L P+ S + + + T L
Sbjct: 615 TRELPPPPPAPPPPPAPSPPP-APATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGA 673
Query: 103 QEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPV 144
E + D E + A+G T N LP F PV
Sbjct: 674 PEAPEPEPPPADDSPAEPEPRAVGRT-----NHLSLPRFAPV 710
Score = 32.3 bits (72), Expect = 0.64
Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 17/98 (17%)
Query: 43 PFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKK 102
P + PPP PP P P+ PP PS P P + AT +
Sbjct: 418 PPPSTSPPPPLCPPPPPPVSPPPLPS-------PPPPPAQEEQEESPPPVVPATCSRKRG 470
Query: 103 QEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPS 140
+ L R ERE A GT+ PP P+
Sbjct: 471 RPPLTPS----QRAEREAARAGPEGTS------PPTPT 498
Score = 30.8 bits (68), Expect = 1.9
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 19 NPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRK 74
+P PA + + P Q L +T+ P A PP P PPPS + P K
Sbjct: 720 SPHGAPA-LSNGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQMPPLEK 774
Score = 28.9 bits (63), Expect = 7.1
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 20 PFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSL-QPSRKLSPT 78
P ++PA ++ Q V++P + EPP +PP + P AP P + L P
Sbjct: 1788 PREEPAHLEAAEENQTI---VHSPAPSSEPPGGEDPPLDTDVLVPGAPERHSPIQNLDPP 1844
Query: 79 EPKNYGSYSTQASAAAATAEL 99
+ GS A + + A +
Sbjct: 1845 LRPDSGSAPPPAPRSFSGARI 1865
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPA- 59
M + G P P EL++P + P V P Y P +PPP+Y PP +
Sbjct: 127 MLHHQRDGPPGLVPMELESPPESPPV---PPGSYMPPSQSYMP--PPQPPPSYYPPTSSQ 181
Query: 60 PLPPPSAPS---LQPSRK-LSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAE 111
P PP+ PS PS+ L+PT + S S+Q+ + + + L Q +R ++
Sbjct: 182 PYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQ 237
Score = 31.2 bits (69), Expect = 1.4
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 46 TREPPPAYEPPAPAPLPPPSAPSLQP 71
TR P P PP P PLPPP P ++P
Sbjct: 1540 TRPPVPIPPPPPPPPLPPP-PPVIKP 1564
Score = 30.4 bits (67), Expect = 2.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 23 DPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPS--APSLQPSRKLSP 77
+P + H P ++ + + PP +Y PP P PP S PS P+R P
Sbjct: 1482 EPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVP 1538
Score = 29.6 bits (65), Expect = 4.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 49 PPPAYEPPAPAPLPPPSAPSLQPSRKLSP 77
PPP P P P+ PP+ P+ P + P
Sbjct: 534 PPPVLPPSLPPPVMPPALPATVPPPGMPP 562
Score = 28.5 bits (62), Expect = 9.3
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 49 PPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEE 105
PPP PP P LP S P S +P P + G S + A +L + ++
Sbjct: 15 PPPPVPPPPPVALPEAS-PGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQK 70
Score = 28.5 bits (62), Expect = 9.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 47 REPPPAYEPPAPAPLPPPSAPSLQPSRKLSP 77
R P PP P P PPP P P + P
Sbjct: 1534 RSSVPVTRPPVPIPPPPPPPPLPPPPPVIKP 1564
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 38.9 bits (89), Expect = 0.007
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Query: 29 HRPSRQYATLDVYNPFETREPPPAYEPPAP------------APLPP---PSAPSLQPSR 73
H +A ++ +PPP PP P AP PP PS P QP +
Sbjct: 145 HHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQ 204
Query: 74 KLSPTEPKNYGSYSTQASAAAATA 97
+ P +P + G A+ AAA A
Sbjct: 205 QSQPQQPSHPGKMQEAAAVAAAAA 228
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 38.5 bits (88), Expect = 0.009
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 15 SELDNPF-QDPAVIQHRPSRQYATLDVYN-PFETREPPPAYEPPAPAPLPPPSAPSLQPS 72
+ LD P Q P +Q ++L++++ P +PPP PP P P PPP P P
Sbjct: 149 TSLDQPMPQGPPPVQ-------SSLNMHSVPSYLTQPPPPPPPPPPLPPPPPPQPPPPPP 201
Query: 73 RKLSPT-EPKNYGSYSTQASAAAA 95
+ L P P G+ + +AAA
Sbjct: 202 QSLGPPGRPNPGGNGVVEVYSAAA 225
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 38.1 bits (87), Expect = 0.012
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 42 NPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAA 93
+P + PPA +PP PAP PP P+ P S + P+N + T A+AA
Sbjct: 91 HPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPS-SASPPQNASNNPTPANAA 141
Score = 32.7 bits (73), Expect = 0.49
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 43 PFETREPPPAYEPPAPA-PLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAA 94
P+E + PPP +PP LPP S P+ PS P K Y T A A A
Sbjct: 288 PYEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRY----TAAGAGA 336
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 38.1 bits (87), Expect = 0.012
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 42 NPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAA 93
+P + PPA +PP PAP PP P+ P S + P+N + T A+AA
Sbjct: 91 HPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPS-SASPPQNASNNPTPANAA 141
Score = 32.7 bits (73), Expect = 0.49
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 43 PFETREPPPAYEPPAPA-PLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAA 94
P+E + PPP +PP LPP S P+ PS P K Y T A A A
Sbjct: 288 PYEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRY----TAAGAGA 336
>gi|5174711 T-box 1 isoform B [Homo sapiens]
Length = 372
Score = 38.1 bits (87), Expect = 0.012
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 39 DVYNPFETREPPPAYE------PPAPAPLPPPSAPSLQPSRKLSPT---EPKNYGSYSTQ 89
D Y P E PPP Y+ P AP P PPP A P+ + + EP+ G
Sbjct: 36 DPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATSAAAEPEGPG----- 90
Query: 90 ASAAAATAELLKKQEELNRKAEELDRR 116
AS AAA +KK ++ + +L+ +
Sbjct: 91 ASCAAAAKAPVKKNAKVAGVSVQLEMK 117
>gi|18104952 T-box 1 isoform C [Homo sapiens]
Length = 495
Score = 38.1 bits (87), Expect = 0.012
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 39 DVYNPFETREPPPAYE------PPAPAPLPPPSAPSLQPSRKLSPT---EPKNYGSYSTQ 89
D Y P E PPP Y+ P AP P PPP A P+ + + EP+ G
Sbjct: 36 DPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATSAAAEPEGPG----- 90
Query: 90 ASAAAATAELLKKQEELNRKAEELDRR 116
AS AAA +KK ++ + +L+ +
Sbjct: 91 ASCAAAAKAPVKKNAKVAGVSVQLEMK 117
>gi|18104950 T-box 1 isoform A [Homo sapiens]
Length = 398
Score = 38.1 bits (87), Expect = 0.012
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 39 DVYNPFETREPPPAYE------PPAPAPLPPPSAPSLQPSRKLSPT---EPKNYGSYSTQ 89
D Y P E PPP Y+ P AP P PPP A P+ + + EP+ G
Sbjct: 36 DPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATSAAAEPEGPG----- 90
Query: 90 ASAAAATAELLKKQEELNRKAEELDRR 116
AS AAA +KK ++ + +L+ +
Sbjct: 91 ASCAAAAKAPVKKNAKVAGVSVQLEMK 117
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 37.7 bits (86), Expect = 0.015
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 42 NPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKN--YGSYSTQASAAAATAEL 99
+P R PPP P A +P PPP P+ P SP P+ YG AA A
Sbjct: 754 SPRLVRRPPPGPAPAAASPGPPP--PASPPGAPASPRAPRTSPYGGL-----PAAPLAGP 806
Query: 100 LKKQEELNRKAEELDRRERELQHAALGGTAT 130
L+R + L + L H A G A+
Sbjct: 807 ALPARRLSRASRPLSASQPSLPHGAPGPAAS 837
Score = 33.1 bits (74), Expect = 0.38
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 19/80 (23%)
Query: 5 RDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPP 64
R G +P A P+ P PA Q +P PPP PPAP P P P
Sbjct: 9 RPGESPGATPAPGPPPPPPPAPPQQQPP----------------PPP---PPAPPPGPGP 49
Query: 65 SAPSLQPSRKLSPTEPKNYG 84
+ P P + P E + G
Sbjct: 50 APPQHPPRAEALPPEAADEG 69
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.7 bits (86), Expect = 0.015
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 20 PFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTE 79
P P + RPS + +P P P+ P PL PPS PS+ + +E
Sbjct: 431 PLPPPGI---RPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS----PPSQVIPASE 483
Query: 80 PKNYGS-YSTQASAAAATAELLKKQEELNRKAEELDRRERELQH 122
PK + S + A + E ++K +L RK EE +RE+E +H
Sbjct: 484 PKRHPSTLPVISDARSVLLEAIRKGIQL-RKVEE--QREQEAKH 524
Score = 29.6 bits (65), Expect = 4.2
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
Query: 11 FAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYE------PPAPAPL--- 61
F P+ P P+ + R T P PPPA PP PAPL
Sbjct: 319 FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIA 378
Query: 62 -------PPPSAPSL-QPSRKLSPTEP 80
PPP AP L QPS ++ P
Sbjct: 379 PGVLHPAPPPIAPPLVQPSPPVARAAP 405
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.7 bits (86), Expect = 0.015
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 20 PFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTE 79
P P + RPS + +P P P+ P PL PPS PS+ + +E
Sbjct: 431 PLPPPGI---RPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS----PPSQVIPASE 483
Query: 80 PKNYGS-YSTQASAAAATAELLKKQEELNRKAEELDRRERELQH 122
PK + S + A + E ++K +L RK EE +RE+E +H
Sbjct: 484 PKRHPSTLPVISDARSVLLEAIRKGIQL-RKVEE--QREQEAKH 524
Score = 29.6 bits (65), Expect = 4.2
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
Query: 11 FAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYE------PPAPAPL--- 61
F P+ P P+ + R T P PPPA PP PAPL
Sbjct: 319 FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIA 378
Query: 62 -------PPPSAPSL-QPSRKLSPTEP 80
PPP AP L QPS ++ P
Sbjct: 379 PGVLHPAPPPIAPPLVQPSPPVARAAP 405
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.7 bits (86), Expect = 0.015
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 20 PFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTE 79
P P + RPS + +P P P+ P PL PPS PS+ + +E
Sbjct: 431 PLPPPGI---RPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS----PPSQVIPASE 483
Query: 80 PKNYGS-YSTQASAAAATAELLKKQEELNRKAEELDRRERELQH 122
PK + S + A + E ++K +L RK EE +RE+E +H
Sbjct: 484 PKRHPSTLPVISDARSVLLEAIRKGIQL-RKVEE--QREQEAKH 524
Score = 29.6 bits (65), Expect = 4.2
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
Query: 11 FAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYE------PPAPAPL--- 61
F P+ P P+ + R T P PPPA PP PAPL
Sbjct: 319 FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIA 378
Query: 62 -------PPPSAPSL-QPSRKLSPTEP 80
PPP AP L QPS ++ P
Sbjct: 379 PGVLHPAPPPIAPPLVQPSPPVARAAP 405
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.7 bits (86), Expect = 0.015
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 20 PFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTE 79
P P + RPS + +P P P+ P PL PPS PS+ + +E
Sbjct: 431 PLPPPGI---RPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS----PPSQVIPASE 483
Query: 80 PKNYGS-YSTQASAAAATAELLKKQEELNRKAEELDRRERELQH 122
PK + S + A + E ++K +L RK EE +RE+E +H
Sbjct: 484 PKRHPSTLPVISDARSVLLEAIRKGIQL-RKVEE--QREQEAKH 524
Score = 29.6 bits (65), Expect = 4.2
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
Query: 11 FAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYE------PPAPAPL--- 61
F P+ P P+ + R T P PPPA PP PAPL
Sbjct: 319 FVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIA 378
Query: 62 -------PPPSAPSL-QPSRKLSPTEP 80
PPP AP L QPS ++ P
Sbjct: 379 PGVLHPAPPPIAPPLVQPSPPVARAAP 405
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,487,690
Number of Sequences: 37866
Number of extensions: 780252
Number of successful extensions: 16400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 517
Number of HSP's that attempted gapping in prelim test: 10258
Number of HSP's gapped (non-prelim): 4551
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.