Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 16306568
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16306568 poly(A) polymerase gamma [Homo sapiens]
(736 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16306568 poly(A) polymerase gamma [Homo sapiens] 1472 0.0
gi|32490557 poly(A) polymerase alpha [Homo sapiens] 846 0.0
gi|77874206 poly(A) polymerase beta (testis specific) [Homo sapi... 762 0.0
gi|91982772 mucin 17 [Homo sapiens] 38 0.039
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 37 0.066
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ... 37 0.066
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ... 37 0.066
gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1 [... 37 0.066
gi|110349719 titin isoform N2-A [Homo sapiens] 37 0.086
gi|110349717 titin isoform novex-2 [Homo sapiens] 37 0.086
gi|110349713 titin isoform novex-1 [Homo sapiens] 37 0.086
gi|110349715 titin isoform N2-B [Homo sapiens] 37 0.086
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ... 37 0.086
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 36 0.15
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 35 0.25
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 35 0.25
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 35 0.25
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 35 0.25
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ... 34 0.43
gi|116284392 mucin 2 precursor [Homo sapiens] 34 0.56
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 33 0.95
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 33 0.95
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 33 0.95
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 33 0.95
gi|110611914 progesterone receptor [Homo sapiens] 33 1.2
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 33 1.2
gi|167736355 mucin 4 isoform a [Homo sapiens] 33 1.2
gi|32698686 N-acetylgalactosaminyltransferase 5 [Homo sapiens] 33 1.2
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 33 1.2
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 33 1.2
>gi|16306568 poly(A) polymerase gamma [Homo sapiens]
Length = 736
Score = 1472 bits (3810), Expect = 0.0
Identities = 736/736 (100%), Positives = 736/736 (100%)
Query: 1 MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHR 60
MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHR
Sbjct: 1 MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHR 60
Query: 61 LVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAP 120
LVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAP
Sbjct: 61 LVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAP 120
Query: 121 RHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDN 180
RHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDN
Sbjct: 121 RHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDN 180
Query: 181 LDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNML 240
LDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNML
Sbjct: 181 LDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNML 240
Query: 241 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 300
GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD
Sbjct: 241 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 300
Query: 301 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL 360
PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL
Sbjct: 301 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL 360
Query: 361 LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF
Sbjct: 361 LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSF 420
Query: 421 PGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGM 480
PGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGM
Sbjct: 421 PGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGM 480
Query: 481 KIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNG 540
KIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNG
Sbjct: 481 KIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNG 540
Query: 541 TPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSP 600
TPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSP
Sbjct: 541 TPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSP 600
Query: 601 PTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKD 660
PTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKD
Sbjct: 601 PTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKD 660
Query: 661 VEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPA 720
VEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPA
Sbjct: 661 VEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPA 720
Query: 721 NNIRVIKNSIRLTLNR 736
NNIRVIKNSIRLTLNR
Sbjct: 721 NNIRVIKNSIRLTLNR 736
>gi|32490557 poly(A) polymerase alpha [Homo sapiens]
Length = 745
Score = 846 bits (2186), Expect = 0.0
Identities = 451/752 (59%), Positives = 543/752 (72%), Gaps = 46/752 (6%)
Query: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
+Q QKHYGITSPISLA+PKE D + TQKLI+ +KPFGVFE+EEEL R+++LGKLNNLV
Sbjct: 13 TQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLV 72
Query: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
KEWI ++SESKNLP SV+ VGGKIFTFGSYRLGVHTKGADIDALCVAPRHV+RSDFF S
Sbjct: 73 KEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTS 132
Query: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRS 191
F++KLK Q+ +++LRAVE+AFVPVIK FDGIEID++FARLA+QTI ++LDLRDDS L++
Sbjct: 133 FYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKN 192
Query: 192 LDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAML 251
LDIRCIRSLNGCRVTDEILHLVPN + FRLTLRA+KLWAKR IYSN+LGFLGGVSWAML
Sbjct: 193 LDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAML 252
Query: 252 VARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHL 311
VARTCQLYPNA ASTLVHKFFLVFSKWEWPNPVLLKQPEE NLNLPVWDPRVNPSDRYHL
Sbjct: 253 VARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHL 312
Query: 312 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 371
MPIITPAYPQQNSTYNVS STR VMVEEFKQGLA+TDEIL K++WSKL E PNFFQKY+
Sbjct: 313 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 372
Query: 372 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNN 431
HYIVL ASA TE+ LEWVGLVESKIR+LVG+LE+NEFITLAHVNPQSFP KE+
Sbjct: 373 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE 432
Query: 432 YVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
+ +MW +G++F++ EN+E++++DLTYDIQSFTDTVYRQA N M + MKI A HVK+KQ
Sbjct: 433 FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 492
Query: 492 LHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSP--ASK 549
LH LP +LQKKKK S V K +L+ S LD S D+DN SP A+K
Sbjct: 493 LHQLLPNHVLQKKKKHSTEGV---------KLTALNDSSLDLSMDSDNSMSVPSPTSATK 543
Query: 550 SDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDS------------TVKT 597
+ + + + PA + ++ A +S+P + + S T
Sbjct: 544 TSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTATQPA 603
Query: 598 VSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTP----KRSHSPSIDG 653
+SPP T+ VV R+ P + G +G + TK TP KR+ SP +
Sbjct: 604 ISPPPKPTVSRVVSST---RLVNPPPRSSGNAATSG-NAATKIPTPIVGVKRTSSPHKEE 659
Query: 654 TPKRLKDVEKFIRLESTFKDPR--------TAEERKRKSVDAIGGESMPIPT-IDTSRKK 704
+PK+ K E + T +D E +++ + +S I T +
Sbjct: 660 SPKKTKTEE-----DETSEDANCLALSGHDKTEAKEQLDTETSTTQSETIQTAASLLASQ 714
Query: 705 RLPSKELPDSSSPVPANNIRVIKNSIRLTLNR 736
+ S +L D + +PAN I VIKNSI+L LNR
Sbjct: 715 KTSSTDLSDIPA-LPANPIPVIKNSIKLRLNR 745
>gi|77874206 poly(A) polymerase beta (testis specific) [Homo
sapiens]
Length = 637
Score = 762 bits (1967), Expect = 0.0
Identities = 379/542 (69%), Positives = 448/542 (82%), Gaps = 7/542 (1%)
Query: 19 YGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDV 78
YG++SPISLA PKE D + TQ+LI+ ++PFGVFE+EEEL R++VL KLNNLVKEWI ++
Sbjct: 21 YGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREI 80
Query: 79 SESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKH 138
SESK+LP SV+ VGGKIFTFGSYRLGVHTKGADIDALCVAP HV+RSDFF SF+ KLK
Sbjct: 81 SESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKL 140
Query: 139 QDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIR 198
Q+ +++LRAVE+AFVPVIK FDGIEID++FARLA+QTI ++LDLRDDS L++LDIRCIR
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 199 SLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 258
SLNGCRVTDEILHLVPN + FRLTLRA+KLWAK IYSN+LGFLGGVSWAMLVARTCQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 259 YPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPA 318
YPNA ASTLV KFFLVFS+WEWPNPVLLK+PEE NLNLPVWDPRVNPSDRYHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 319 YPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTA 378
YPQQNSTYNVS STR VM+EEFKQGLA+T EIL K++WSKL E P+FFQKY+HYIVL A
Sbjct: 321 YPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLA 380
Query: 379 SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFL 438
SASTE+ HLEWVGLVESKIR+LVG+LE+NEFITLAHVNPQSFP KE+ + +MW +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVI 440
Query: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPA 498
G+ ++ +N+E ++IDLTYDIQSFTDTVYRQA N M + GMKI A H+++K+LH LP
Sbjct: 441 GLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQLLPH 500
Query: 499 EILQKKKKQS-----LSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSP 553
+LQ KK S L+D+N SS L + +S + SS T P S + +SP
Sbjct: 501 HVLQDKKAHSTEGRRLTDLNDSSFDLSAG--CENSMSVPSSTSTMKTGPLISSSQGRNSP 558
Query: 554 SV 555
++
Sbjct: 559 AL 560
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 37.7 bits (86), Expect = 0.039
Identities = 54/245 (22%), Positives = 93/245 (37%), Gaps = 56/245 (22%)
Query: 520 QSKRLSLDSSCLDSSRDTDNGTPFNS------PASKSDSPSVGETERNSAEPAAVIVEKP 573
+S + + + + +S ++ TP S P S++ ++ T +++ P E
Sbjct: 1728 RSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEAT 1787
Query: 574 LSVPPAQGLSIPVIGAKVDSTVKTVSP-----------PTVCTIPT-----VVGRNVIPR 617
S A+G SIP T T +P T+ T P VV +
Sbjct: 1788 SSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVANSEASTLSTTPVDSNSPVVTSTAVSS 1847
Query: 618 ITTP--------HNPAQGQPHLNGMSNITKTV----TPKRSHSPSIDGTPKRLKDVEKFI 665
TP P++G L + T TV T S +P++ TP V +
Sbjct: 1848 SPTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTP-----VTTYA 1902
Query: 666 RLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRV 725
++ S+ P TA+ G SMP T R+ R P +P S++ V ++ I
Sbjct: 1903 QVSSS---PTTAD-----------GSSMP---TSTPREGRPPLTSIPVSTTTVASSEINT 1945
Query: 726 IKNSI 730
+ ++
Sbjct: 1946 LSTTL 1950
Score = 37.0 bits (84), Expect = 0.066
Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 22/223 (9%)
Query: 521 SKRLSLDSSCLDSSRDTDNGTPFNS-PASK-----SDSPSVGETERNSAEPAAVIVEKPL 574
S + D + + +S ++ TP S P SK S++ ++ T +++ E
Sbjct: 727 SSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASC 786
Query: 575 SVPPAQGLSIPV--------IGAKVDSTVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQ 626
S +G S+P+ + + ++ V+ P T+ T + P +TT +
Sbjct: 787 SPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSP-VTTSTEVSS 845
Query: 627 GQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKD---PRTAEERKRK 683
G S T T + R+ S+ L L +T D P T R
Sbjct: 846 SPTPAEGTSMPTSTYSEGRTPLTSMP-VSTTLVATSAISTLSTTPVDTSTPVTNSTEARS 904
Query: 684 SVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRVI 726
S G SMP T + P +PDS++PV ++ R +
Sbjct: 905 SPTTSEGTSMPT---STPGEGSTPLTSMPDSTTPVVSSEARTL 944
Score = 37.0 bits (84), Expect = 0.066
Identities = 46/211 (21%), Positives = 77/211 (36%), Gaps = 19/211 (9%)
Query: 534 SRDTDNGTPFNS------PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVI 587
S ++ TP S P + ++ ++ T +S P E S PA+G S+P+
Sbjct: 3039 STPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPIS 3098
Query: 588 GAKVDSTVKTVSP--PTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKR 645
ST T P T T + + P T+ + H S T T
Sbjct: 3099 TYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAH---SSPTTSEGTSMP 3155
Query: 646 SHSPSIDGTPKRLKDVEKFI-------RLESTFKDPRTAEERKRKSVDAIGGESMPIPTI 698
+ +PS TP V + L +T D T ++ + E IPT
Sbjct: 3156 TSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAEGTSIPT- 3214
Query: 699 DTSRKKRLPSKELPDSSSPVPANNIRVIKNS 729
T + P +P S++PV ++ ++ +
Sbjct: 3215 STPSEGMTPLTSVPVSNTPVASSEASILSTT 3245
Score = 36.6 bits (83), Expect = 0.086
Identities = 42/218 (19%), Positives = 78/218 (35%), Gaps = 18/218 (8%)
Query: 527 DSSCLDSSRDTDNGTPF------NSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQ 580
+ + + +S ++ TP N+P + S++ + T +S P E S P A+
Sbjct: 3208 EGTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEASSSPPTAE 3267
Query: 581 GLSIPVIGAKVDSTVKTVSPPTVCTIP-------TVVGRNVIPRITTPHNPAQGQPHLNG 633
G S+P ST T P + T+ + + +TT + P +G
Sbjct: 3268 GTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSPPIADG 3327
Query: 634 MSNITKTVTPKRS--HSPSIDGTPKRLKDVEKFIRLESTFKDPRTAEERKRKSVDAIGGE 691
S T T + + + S TP + P T S G
Sbjct: 3328 TSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGT 3387
Query: 692 SMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRVIKNS 729
S+P + + P +P S++PV ++ + + +
Sbjct: 3388 SIP---TSSPSEGTTPLASMPVSTTPVVSSEVNTLSTT 3422
Score = 33.9 bits (76), Expect = 0.56
Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 22/226 (9%)
Query: 521 SKRLSLDSSCLDSSRDTDNGTPFNS------PASKSDSPSVGETERNSAEPAAVIVEKPL 574
S + + + + +S ++ TP S P + S++ ++ T +++ P +
Sbjct: 2790 SSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASS 2849
Query: 575 SVPPAQGLSIPVIGAKVDSTVKTVSP-----------PTVCTIPTVVGRNVIPRITTPHN 623
S A+G+ +P+ A ST+ T P T+ T P V +
Sbjct: 2850 SPTTAEGIVVPISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSS 2909
Query: 624 PAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKDPRTAEERKRK 683
P + +S ++ TP S + P + + P T
Sbjct: 2910 PTTAEGTSMPISTPSEVSTPLT--SILVSTVPVAGSEASTLSTTPVDTRTPVTTSAEASS 2967
Query: 684 SVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRVIKNS 729
S G SMP I T ++R P + S+ PV ++ + +
Sbjct: 2968 SPTTAEGTSMP---ISTPGERRTPLTSMSVSTMPVASSEASTLSRT 3010
Score = 32.3 bits (72), Expect = 1.6
Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 533 SSRDTDNGTPFNSPASKSDSPSVGE----TERNSAEPAAVIVEKPLSVPPAQGLSIPVIG 588
S+ DN TP + SP+ E N +E + P+S P +
Sbjct: 1358 STTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSEASTLS 1417
Query: 589 A-KVDSTVKTVSPPTVCTIPTVVGRNVIPRITTPHN-------PAQGQPHLNGMSNITKT 640
A VD++ + + PT IP T P P N ++ T +
Sbjct: 1418 ATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEAS-TLS 1476
Query: 641 VTPKRSHSPSIDGT 654
TP S+SP + T
Sbjct: 1477 TTPVDSNSPVVTST 1490
Score = 31.2 bits (69), Expect = 3.6
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
Query: 515 SSGGLQSKRLSLDSSCLDSSRDTDNGTPF------NSPASKSDSPSVGETERNSAEPAAV 568
+S S + + + +S ++ TP N+P + S++ ++ T +S P
Sbjct: 1429 TSAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEASTLSTTPVDSNSPVVT 1488
Query: 569 IVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTVCTIPT--VVGRNVIPRIT----TPH 622
S PA+G SI + ST T P + T+ + + + P +T T +
Sbjct: 1489 STAVSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTY 1548
Query: 623 NPAQGQP 629
+ A P
Sbjct: 1549 SQASSSP 1555
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 37.0 bits (84), Expect = 0.066
Identities = 61/276 (22%), Positives = 106/276 (38%), Gaps = 53/276 (19%)
Query: 488 KKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPA 547
+K+QL L ++ Q+K+ Q + G + S SSC S + PFN
Sbjct: 543 QKQQLVERLKLQLEQEKRAQQPAPAPAPLGTPVKQENSF-SSCQLSQQPLGPAHPFN--- 598
Query: 548 SKSDSPSVGETERNSAEPAAV-------IVEKPLSVPPAQGLSIP--VIGAKVDSTVKTV 598
PS+ N +P AV +V++ P + + P ++G + S +K V
Sbjct: 599 -----PSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPSLIKGV 653
Query: 599 SPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSID------ 652
+PPT+ T T G +++ +T + + G + ++ +P + S +D
Sbjct: 654 APPTLITDST--GTHLVLTVTNKNADSPGLSSGSPQQPSSQPGSPAPAPSAQMDLEHPLQ 711
Query: 653 ---GTPKRLKDVEKFIRLESTFKDPRTAEERKR---------------------KSVDAI 688
GTP L E E+ + P+ E K ++
Sbjct: 712 PLFGTPTSLLKKEPPGYEEAMSQQPKQQENGSSSQQMDDLFDILIQSGEISADFKEPPSL 771
Query: 689 GGESMPIP-TIDTS--RKKRLPSKELPDSSSPVPAN 721
G+ P P T+ S + PS ELP ++ P P +
Sbjct: 772 PGKEKPSPKTVCGSPLAAQPSPSAELPQAAPPPPGS 807
>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 37.0 bits (84), Expect = 0.066
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 563 AEPAAVIVEKPLSVPPAQ-------GLSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVI 615
A P A L++P A G++ P + A + + +P P ++++
Sbjct: 101 AMPPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLL 160
Query: 616 --PRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKD 673
P + P NP+Q +L+G + P++ S TP R + + +E
Sbjct: 161 GPPPVGVPMNPSQF--NLSGRN-------PQKQARTSSSTTPNRKDSSSQTMPVEDKSDP 211
Query: 674 PRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKE-LPDSSSPVPANNIR 724
P +EE +D + +P D +++KR P+ E P +S +PA +R
Sbjct: 212 PEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLR 263
>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
[Homo sapiens]
Length = 842
Score = 37.0 bits (84), Expect = 0.066
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 563 AEPAAVIVEKPLSVPPAQ-------GLSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVI 615
A P A L++P A G++ P + A + + +P P ++++
Sbjct: 101 AMPPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLL 160
Query: 616 --PRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKD 673
P + P NP+Q +L+G + P++ S TP R + + +E
Sbjct: 161 GPPPVGVPMNPSQF--NLSGRN-------PQKQARTSSSTTPNRKDSSSQTMPVEDKSDP 211
Query: 674 PRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKE-LPDSSSPVPANNIR 724
P +EE +D + +P D +++KR P+ E P +S +PA +R
Sbjct: 212 PEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLR 263
>gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1
[Homo sapiens]
Length = 898
Score = 37.0 bits (84), Expect = 0.066
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 563 AEPAAVIVEKPLSVPPAQ-------GLSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVI 615
A P A L++P A G++ P + A + + +P P ++++
Sbjct: 101 AMPPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLL 160
Query: 616 --PRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKD 673
P + P NP+Q +L+G + P++ S TP R + + +E
Sbjct: 161 GPPPVGVPMNPSQF--NLSGRN-------PQKQARTSSSTTPNRKDSSSQTMPVEDKSDP 211
Query: 674 PRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKE-LPDSSSPVPANNIR 724
P +EE +D + +P D +++KR P+ E P +S +PA +R
Sbjct: 212 PEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLR 263
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 36.6 bits (83), Expect = 0.086
Identities = 44/168 (26%), Positives = 58/168 (34%), Gaps = 32/168 (19%)
Query: 542 PFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPP 601
P P + + P+V + ER EP V KP PA P K ++ VKT+ PP
Sbjct: 10981 PPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPA-----PEPKPKPEAEVKTIKPP 11035
Query: 602 TVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDV 661
V PT + V + A+ + PK I G PK
Sbjct: 11036 PVEPEPTPIAAPVTVPVVGKKAEAKAPKE--------EAAKPK----GPIKGVPK----- 11078
Query: 662 EKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSK 709
K P E +RK GGE P T + K +P K
Sbjct: 11079 ----------KTPSPIEAERRKLRPGSGGEKPPDEAPFTYQLKAVPLK 11116
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 36.6 bits (83), Expect = 0.086
Identities = 44/168 (26%), Positives = 58/168 (34%), Gaps = 32/168 (19%)
Query: 542 PFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPP 601
P P + + P+V + ER EP V KP PA P K ++ VKT+ PP
Sbjct: 4676 PPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPA-----PEPKPKPEAEVKTIKPP 4730
Query: 602 TVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDV 661
V PT + V + A+ + PK I G PK
Sbjct: 4731 PVEPEPTPIAAPVTVPVVGKKAEAKAPKE--------EAAKPK----GPIKGVPK----- 4773
Query: 662 EKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSK 709
K P E +RK GGE P T + K +P K
Sbjct: 4774 ----------KTPSPIEAERRKLRPGSGGEKPPDEAPFTYQLKAVPLK 4811
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 36.6 bits (83), Expect = 0.086
Identities = 44/168 (26%), Positives = 58/168 (34%), Gaps = 32/168 (19%)
Query: 542 PFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPP 601
P P + + P+V + ER EP V KP PA P K ++ VKT+ PP
Sbjct: 4609 PPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPA-----PEPKPKPEAEVKTIKPP 4663
Query: 602 TVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDV 661
V PT + V + A+ + PK I G PK
Sbjct: 4664 PVEPEPTPIAAPVTVPVVGKKAEAKAPKE--------EAAKPK----GPIKGVPK----- 4706
Query: 662 EKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSK 709
K P E +RK GGE P T + K +P K
Sbjct: 4707 ----------KTPSPIEAERRKLRPGSGGEKPPDEAPFTYQLKAVPLK 4744
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 36.6 bits (83), Expect = 0.086
Identities = 44/168 (26%), Positives = 58/168 (34%), Gaps = 32/168 (19%)
Query: 542 PFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPP 601
P P + + P+V + ER EP V KP PA P K ++ VKT+ PP
Sbjct: 4484 PPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPA-----PEPKPKPEAEVKTIKPP 4538
Query: 602 TVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDV 661
V PT + V + A+ + PK I G PK
Sbjct: 4539 PVEPEPTPIAAPVTVPVVGKKAEAKAPKE--------EAAKPK----GPIKGVPK----- 4581
Query: 662 EKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSK 709
K P E +RK GGE P T + K +P K
Sbjct: 4582 ----------KTPSPIEAERRKLRPGSGGEKPPDEAPFTYQLKAVPLK 4619
>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
Length = 818
Score = 36.6 bits (83), Expect = 0.086
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 581 GLSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVI--PRITTPHNPAQGQPHLNGMSNIT 638
G++ P + A + + +P P ++++ P + P NP+Q +L+G +
Sbjct: 102 GMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQF--NLSGRN--- 156
Query: 639 KTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTI 698
P++ S TP R + + +E P +EE +D + +P
Sbjct: 157 ----PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPE 212
Query: 699 DTSRKKRLPSKE-LPDSSSPVPANNIR 724
D +++KR P+ E P +S +PA +R
Sbjct: 213 DIAKEKRTPAPEPEPCEASELPAKRLR 239
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 35.8 bits (81), Expect = 0.15
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 93 GGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSD------FFQSFFEKLKHQDGIRNLR 146
G K+ FGS + G K +D+D +C+ +E ++ + L+ G+RN+
Sbjct: 1039 GTKLSLFGSSKNGFGFKQSDLD-VCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNIL 1097
Query: 147 AVEDAFVPVIKFEF--DGIEIDL 167
+ A VP++KF G+E+D+
Sbjct: 1098 PITTAKVPIVKFFHLRSGLEVDI 1120
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 35.0 bits (79), Expect = 0.25
Identities = 44/194 (22%), Positives = 68/194 (35%), Gaps = 35/194 (18%)
Query: 545 SPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTVC 604
SP S+S G S+ P L + A S+P + PP C
Sbjct: 294 SPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPS------EALPPPAC 347
Query: 605 TIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKF 664
R++I R L G S T+ P P+ +G P ++ VE F
Sbjct: 348 PSAPAPRRSIISR-------------LFGTSPATEAAPPPPEPVPAAEG-PATVQSVEDF 393
Query: 665 I---RLESTFKDPRTAEERKRK------------SVDAIGGESMPIPTIDTSRKKRLPSK 709
+ RL+ +F + T ++K +A+GG M D + P
Sbjct: 394 VPDDRLDRSFLEDTTPARDEKKVGAKAAQQDSDSDGEALGGNPMVAGFQDDVDLEDQPRG 453
Query: 710 ELPDSSSPVPANNI 723
P + PVP+ +I
Sbjct: 454 SPPLPAGPVPSQDI 467
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 35.0 bits (79), Expect = 0.25
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 95 KIFTFGSYRLGVHTKGADIDALCVAPRH-----VERSDFFQSFFEKLKHQDGIRNLRAVE 149
++ FGS + G + +D+D H + + ++ + LK G+RN+ +
Sbjct: 992 RLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPIT 1051
Query: 150 DAFVPVIKFEF--DGIEIDL 167
A VP++KFE G+E D+
Sbjct: 1052 TAKVPIVKFEHRRSGLEGDI 1071
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 35.0 bits (79), Expect = 0.25
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 95 KIFTFGSYRLGVHTKGADIDALCVAPRH-----VERSDFFQSFFEKLKHQDGIRNLRAVE 149
++ FGS + G + +D+D H + + ++ + LK G+RN+ +
Sbjct: 992 RLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPIT 1051
Query: 150 DAFVPVIKFEF--DGIEIDL 167
A VP++KFE G+E D+
Sbjct: 1052 TAKVPIVKFEHRRSGLEGDI 1071
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 35.0 bits (79), Expect = 0.25
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 95 KIFTFGSYRLGVHTKGADIDALCVAPRH-----VERSDFFQSFFEKLKHQDGIRNLRAVE 149
++ FGS + G + +D+D H + + ++ + LK G+RN+ +
Sbjct: 992 RLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPIT 1051
Query: 150 DAFVPVIKFEF--DGIEIDL 167
A VP++KFE G+E D+
Sbjct: 1052 TAKVPIVKFEHRRSGLEGDI 1071
>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
Length = 837
Score = 34.3 bits (77), Expect = 0.43
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 563 AEPAAVIVEKPLSVPPAQ-------GLSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVI 615
A P A L++P A G++ P + A + + +P P ++++
Sbjct: 101 AMPPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLL 160
Query: 616 --PRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKD 673
P + P NP+Q +L+G + P++ S TP R K + +E
Sbjct: 161 GPPPVGVPMNPSQF--NLSGRN-------PQKQARTSSSTTPNR-----KTMPVEDKSDP 206
Query: 674 PRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKE-LPDSSSPVPANNIR 724
P +EE +D + +P D +++KR P+ E P +S +PA +R
Sbjct: 207 PEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPEPCEASELPAKRLR 258
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 33.9 bits (76), Expect = 0.56
Identities = 38/186 (20%), Positives = 56/186 (30%), Gaps = 20/186 (10%)
Query: 537 TDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLS---VPPAQGLSIPVIGAKVDS 593
T P +P+ + + + + P + P S +PP S P
Sbjct: 1475 TTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPP 1534
Query: 594 TVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDG 653
T SPPT I +P TTP P T T P + SP
Sbjct: 1535 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPP----------PTTTTTPPPTTTPSPPTTT 1584
Query: 654 TPKRLKDVEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPD 713
TP + +T P T + + P P T + LP
Sbjct: 1585 TPSP-------PTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP 1637
Query: 714 SSSPVP 719
+++P P
Sbjct: 1638 TTTPSP 1643
Score = 33.1 bits (74), Expect = 0.95
Identities = 31/130 (23%), Positives = 43/130 (33%), Gaps = 16/130 (12%)
Query: 537 TDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLS---VPPAQGLSIPVIGAKVDS 593
T P +P+ + + + + P + P S +PP S P
Sbjct: 1593 TTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1652
Query: 594 TVKTVSPPTVCT-IPTVVGRNVIPRITTPHNP------------AQGQPHLNGMSNITKT 640
T SPPT T P + P TTP +P P S IT T
Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTT 1712
Query: 641 VTPKRSHSPS 650
TP + +PS
Sbjct: 1713 TTPSSTTTPS 1722
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 591 VDSTVKTVSPPTVCTIPTVVGRNVIPRITTPHNP----AQGQPHLNGMSNITKTVTPKRS 646
+D + T SPPT P +P TTP P P IT T TP +
Sbjct: 1392 MDKCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPT 1451
Query: 647 HSPS 650
+PS
Sbjct: 1452 TTPS 1455
Score = 31.6 bits (70), Expect = 2.8
Identities = 28/122 (22%), Positives = 38/122 (31%), Gaps = 3/122 (2%)
Query: 537 TDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSV---PPAQGLSIPVIGAKVDS 593
T P +P+ + +P T + P P + PP S P
Sbjct: 1530 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPP 1589
Query: 594 TVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDG 653
T+ T +PP T P TT +P P S T T S P+
Sbjct: 1590 TITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTT 1649
Query: 654 TP 655
TP
Sbjct: 1650 TP 1651
Score = 31.2 bits (69), Expect = 3.6
Identities = 29/118 (24%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 537 TDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSV----PPAQGLSIPVIGAKVD 592
T P +P+ + + T + P P + PP S P
Sbjct: 1569 TTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1628
Query: 593 STVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPS 650
T T PPT P P TTP P P IT T TP + +PS
Sbjct: 1629 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTP----SPPITTTTTPPPTTTPS 1682
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 33.1 bits (74), Expect = 0.95
Identities = 54/246 (21%), Positives = 87/246 (35%), Gaps = 28/246 (11%)
Query: 505 KKQSLSDVNRSSGGLQS---KRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERN 561
K Q L D+++ L+ K +D RD D +P +SP SK+ G +
Sbjct: 189 KHQLLGDLHQEGPPLKGAGGKERPGSKEEVDEDRDVDESSPQDSPPSKASPAQDGRPPQT 248
Query: 562 SAEPAAVIVEKPLSVP--PAQG-LSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVIPRI 618
+A A S+P PA+G + +PV ST S P ++ G++
Sbjct: 249 AAREAT-------SIPGFPAEGAIPLPVDFLSKVSTEIPASEPDGPSVGRAKGQDAPLEF 301
Query: 619 T-----TPH---NPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRL-------KDVEK 663
T TP+ A + HL + + PS+ K K
Sbjct: 302 TFHVEITPNVQKEQAHSEEHLGRAAFPGAPGEGPEARGPSLGEDTKEADLPEPSEKQPAA 361
Query: 664 FIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNI 723
R + + P+ KS D G + T S K L ++ P P ++
Sbjct: 362 APRGKPVSRVPQLKARMVSKSKDGTGSDDKKAKTSTRSSAKTLKNRPCLSPKHPTPGSSD 421
Query: 724 RVIKNS 729
+I+ S
Sbjct: 422 PLIQPS 427
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 33.1 bits (74), Expect = 0.95
Identities = 54/246 (21%), Positives = 87/246 (35%), Gaps = 28/246 (11%)
Query: 505 KKQSLSDVNRSSGGLQS---KRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERN 561
K Q L D+++ L+ K +D RD D +P +SP SK+ G +
Sbjct: 189 KHQLLGDLHQEGPPLKGAGGKERPGSKEEVDEDRDVDESSPQDSPPSKASPAQDGRPPQT 248
Query: 562 SAEPAAVIVEKPLSVP--PAQG-LSIPVIGAKVDSTVKTVSPPTVCTIPTVVGRNVIPRI 618
+A A S+P PA+G + +PV ST S P ++ G++
Sbjct: 249 AAREAT-------SIPGFPAEGAIPLPVDFLSKVSTEIPASEPDGPSVGRAKGQDAPLEF 301
Query: 619 T-----TPH---NPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRL-------KDVEK 663
T TP+ A + HL + + PS+ K K
Sbjct: 302 TFHVEITPNVQKEQAHSEEHLGRAAFPGAPGEGPEARGPSLGEDTKEADLPEPSEKQPAA 361
Query: 664 FIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNI 723
R + + P+ KS D G + T S K L ++ P P ++
Sbjct: 362 APRGKPVSRVPQLKARMVSKSKDGTGSDDKKAKTSTRSSAKTLKNRPCLSPKHPTPGSSD 421
Query: 724 RVIKNS 729
+I+ S
Sbjct: 422 PLIQPS 427
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 33.1 bits (74), Expect = 0.95
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 546 PASKSDSPSVGETERNSAEPAAVIVEKPL-SVPPAQGLSIPVIGAKVDSTVKTVSPPTVC 604
P + +D P V T +S + + P+ V PA IPV A DS + V+P +
Sbjct: 1928 PVTPADDPIVPVTSADSPIVSVTPADSPVFPVTPADSPVIPV--ASADSPLVPVTPADMV 1985
Query: 605 TIPTVVGRNVIPRITTPHNPA----QGQPHLNGMSNITKTVTPKRSHSPSIDGTP 655
+P + + +T +PA + +++ V P + SP + TP
Sbjct: 1986 VVPVIPADGPVIPVTPAESPAIPVTPTDSPVVPVTSADSPVIPVTADSPFVPVTP 2040
Score = 32.3 bits (72), Expect = 1.6
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 20/118 (16%)
Query: 546 PASKSDSPSVGETERNSAEPAAVIVEKPL-SVPPAQGLSIPVIGAKV--------DSTVK 596
P + +DSP + T +S A + P+ SV PA G +PV A + DS V
Sbjct: 2426 PVTPADSPVIPVTPADSLVVPATPADDPVVSVTPADGPVVPVTTADIPVISVTSADSPVV 2485
Query: 597 TVSPPTVCTIPTVVGRNVIPRIT------TPHNPAQG-----QPHLNGMSNITKTVTP 643
V+P +P +V+ T P +PA P+ N + ++T +P
Sbjct: 2486 PVTPADGLVVPVTSADSVVVPATPADCPLVPVDPADSPIVLFTPYDNPVVSVTSDDSP 2543
Score = 31.2 bits (69), Expect = 3.6
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 546 PASKSDSPSVGETERNSAEPAAVIVEKPL-SVPPAQGLSIPVIGAKVDSTVKTVSPPTVC 604
P + D P V T N V+ P+ SV PA G +PV A D V V+P
Sbjct: 1617 PVTSVDIPVVPVTPANGPVAPVTPVDDPVVSVNPADGSVVPVTSA--DCPVVPVTPADGL 1674
Query: 605 TIPTVVGRNVIPRITTPHNP 624
+P + I +T +P
Sbjct: 1675 VVPVTPADSPIVPVTPADSP 1694
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 33.1 bits (74), Expect = 0.95
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 539 NGTPF---NSPASKSDSPSVGETERNSAEPAAVIVEKPLSVP 577
NG F N +SKS+SP + SA+PAAV V KP+ P
Sbjct: 1664 NGNSFLTSNVASSKSESPVPQNEKATSAQPAAVEVAKPVDFP 1705
>gi|110611914 progesterone receptor [Homo sapiens]
Length = 933
Score = 32.7 bits (73), Expect = 1.2
Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 29/144 (20%)
Query: 506 KQSLSDVN---------RSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVG 556
+QSLSDV R +GG S DS LDS DT + P SP
Sbjct: 77 QQSLSDVEGAYSRAEATRGAGGSSSSPPEKDSGLLDSVLDTLLAP--SGPGQSQPSPPAC 134
Query: 557 ETERNSAEPAAVIVEKPLSVPPAQGLSIPVI---GAKVDSTVKTVSPPTVCTIPTVVGRN 613
E + + E P + P Q + P++ G KV + T +
Sbjct: 135 EVTSSWCLFGPELPEDPPAAPATQRVLSPLMSRSGCKVGDSSGTAA-----------AHK 183
Query: 614 VIPRITTPHN----PAQGQPHLNG 633
V+PR +P PA PH +G
Sbjct: 184 VLPRGLSPARQLLLPASESPHWSG 207
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 32.7 bits (73), Expect = 1.2
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%)
Query: 546 PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKT--VSPPTV 603
P++++ S + ER + A+V + P PA P +V S +++ V+PP+
Sbjct: 2406 PSTENSSQEISVEERTPTK-ASVPPDLPPPPQPAPVDEEPQARFRVHSIIESDPVTPPSD 2464
Query: 604 CTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPK------- 656
+IP +V +P + G PH + + +T+ +T R P TP
Sbjct: 2465 PSIPIPTLPSVTAAKLSPPVASGGIPHQSPPTKVTEWIT--RQEEPRAQSTPSPALPPDT 2522
Query: 657 RLKDVE-KFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLP----SKEL 711
+ DV+ L DP+ S + P+ + P K L
Sbjct: 2523 KASDVDTSSSTLRKILMDPKYVSATSVTSTSVTTAIAEPVSAAPCLHEAPPPPVDSKKPL 2582
Query: 712 PDSSSPVPANNIRVIKNSIRLTLNR 736
+ ++P NN + + + + ++
Sbjct: 2583 EEKTAPPVTNNSEIQASEVLVAADK 2607
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 32.7 bits (73), Expect = 1.2
Identities = 43/183 (23%), Positives = 67/183 (36%), Gaps = 24/183 (13%)
Query: 533 SSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVD 592
SS T + TP P + + S S G+T R + V S Q +PV
Sbjct: 3527 SSVSTGHATPL--PVTDTSSASTGDTTR-------LPVTDTSSASTGQATPLPVTIPSSS 3577
Query: 593 STVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSID 652
S+ T P T G +T+P + + G H+ + +T T + H+
Sbjct: 3578 SSGHTTPLPVTSTSSVSTGHVTPLHVTSPSSASTG--HVTPLP-VTSTSSASTGHA---- 3630
Query: 653 GTPKRLKDVEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELP 712
TP + D +T P + S G++ P+P DTS + LP
Sbjct: 3631 -TPLLVTDASSVSTGHAT---PLPVTDASSAST----GDTTPLPVTDTSSASTGQATPLP 3682
Query: 713 DSS 715
+S
Sbjct: 3683 VTS 3685
Score = 30.8 bits (68), Expect = 4.7
Identities = 34/126 (26%), Positives = 44/126 (34%), Gaps = 13/126 (10%)
Query: 533 SSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVD 592
SS T TP P + S S G+T ++V SV +PV
Sbjct: 3495 SSASTGQATPL--PVTSLSSVSTGDT-------TPLLVTDASSVSTGHATPLPVTDTSSA 3545
Query: 593 STVKTVSPPTVCTIPTVVGRNVIPRITTPHNPAQGQ----PHLNGMSNITKTVTPKRSHS 648
ST T P T G+ +T P + + G P + S T VTP S
Sbjct: 3546 STGDTTRLPVTDTSSASTGQATPLPVTIPSSSSSGHTTPLPVTSTSSVSTGHVTPLHVTS 3605
Query: 649 PSIDGT 654
PS T
Sbjct: 3606 PSSAST 3611
>gi|32698686 N-acetylgalactosaminyltransferase 5 [Homo sapiens]
Length = 940
Score = 32.7 bits (73), Expect = 1.2
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 634 MSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRLESTFKDPR-----TAEERKRKSVDAI 688
M ++ P++SHSPS D T K + + + + + P+ A ER + A+
Sbjct: 188 MGRVSLKQEPRKSHSPSSD-TSKLAAERDLNVTISLSTDRPKQRSQAVANERAHPASTAV 246
Query: 689 --GGESMPIPTIDTSRKKRLPSKELPDSSSPVP---ANNIRVIKNSIRLT 733
GE+M + T K+ +K ++S P P N+ R+ K SI T
Sbjct: 247 PKSGEAMALNKTKTQSKEVNANKHKANTSLPFPKFTVNSNRLRKQSINET 296
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 32.7 bits (73), Expect = 1.2
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 23/145 (15%)
Query: 541 TPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSP 600
TP + P SP G+ S++P + + P P+ +P + + T
Sbjct: 444 TPQSMPPPPQPSPQPGQP---SSQPNSNVSSGPA---PSPSSFLPSPSPQPSQSPVTART 497
Query: 601 PTVCTIPTVVGRNVIPRITTPHNP-----------AQGQPHLNGMSNITKTVTPKRSHSP 649
P ++P+ N TP NP A+ Q +L+ + ++K + P R
Sbjct: 498 PQNFSVPSPGPLN------TPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMIN 551
Query: 650 SIDGTPKRLKDVEKFIRLESTFKDP 674
ID R KD+ K L DP
Sbjct: 552 KIDKNEDRKKDLSKMKSLLDILTDP 576
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 32.7 bits (73), Expect = 1.2
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 23/145 (15%)
Query: 541 TPFNSPASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSP 600
TP + P SP G+ S++P + + P P+ +P + + T
Sbjct: 404 TPQSMPPPPQPSPQPGQP---SSQPNSNVSSGPA---PSPSSFLPSPSPQPSQSPVTART 457
Query: 601 PTVCTIPTVVGRNVIPRITTPHNP-----------AQGQPHLNGMSNITKTVTPKRSHSP 649
P ++P+ N TP NP A+ Q +L+ + ++K + P R
Sbjct: 458 PQNFSVPSPGPLN------TPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMIN 511
Query: 650 SIDGTPKRLKDVEKFIRLESTFKDP 674
ID R KD+ K L DP
Sbjct: 512 KIDKNEDRKKDLSKMKSLLDILTDP 536
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,698,235
Number of Sequences: 37866
Number of extensions: 1357631
Number of successful extensions: 4522
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 4219
Number of HSP's gapped (non-prelim): 344
length of query: 736
length of database: 18,247,518
effective HSP length: 110
effective length of query: 626
effective length of database: 14,082,258
effective search space: 8815493508
effective search space used: 8815493508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.