Guide to the Human Genome
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Name: GALNT5 Sequence: fasta or formatted (940aa) NCBI GI: 32698686
Description:

N-acetylgalactosaminyltransferase 5

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         53           2
 C cysteine            1.6         15           1
 D aspartate           4.9         46           2
 E glutamate           6.3         59           3
 F phenylalanine       3.8         36           2
 G glycine             6.0         56           2
 H histidine           3.0         28           1
 I isoleucine          5.5         52           2
 K lysine              8.7         82           2
 L leucine             8.6         81           2
 M methionine          1.7         16           1
 N asparagine          5.0         47           2
 P proline             5.7         54           2
 Q glutamine           3.7         35           2
 R arginine            6.4         60           2
 S serine              7.2         68           4
 T threonine           5.1         48           2
 V valine              7.6         71           3
 W tryptophan          1.7         16           1
 Y tyrosine            1.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylgalactosaminyltransferase 5 
GALNT1                0.199   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT13               0.195   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL6               0.190   N-acetylgalactosaminyltransferase-like 6 
GALNT10               0.190   GalNAc transferase 10 isoform a 
GALNT4                0.176   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT3                0.175   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT6                0.173   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT11               0.166   N-acetylgalactosaminyltransferase 11 
GALNTL1               0.164   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT12               0.164   N-acetylgalactosaminyltransferase 12 
GALNT14               0.164   N-acetylgalactosaminyltransferase 14 
GALNT2                0.162   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNTL2               0.156   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
WBSCR17               0.143   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNT7                0.141   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNTL5               0.140   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT9                0.139   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL4               0.136   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT8                0.125   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT10               0.052   GalNAc transferase 10 isoform b 
GALNT9                0.033   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
NOLC1                 0.010   nucleolar and coiled-body phosphoprotein 1 
CDC2L5                0.009   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.009   cell division cycle 2-like 5 isoform 2 
DPCR1                 0.007   diffuse panbronchiolitis critical region 1 protein ...
DNMT1                 0.007   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
NACA                  0.007   nascent polypeptide-associated complex alpha subuni...
LOC100294236          0.007   PREDICTED: similar to diffuse panbronchiolitis crit...
SRRM2                 0.007   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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