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Search of human proteins with 162809336
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|162809336 hypothetical protein LOC284611 [Homo sapiens]
(360 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|162809336 hypothetical protein LOC284611 [Homo sapiens] 713 0.0
gi|78191787 early estrogen-induced gene 1 protein isoform a [Hom... 404 e-113
gi|42558264 early estrogen-induced gene 1 protein isoform b [Hom... 175 5e-44
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 33 0.52
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 33 0.52
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2... 33 0.52
gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo s... 32 0.68
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 32 0.68
gi|38044112 restin isoform b [Homo sapiens] 32 0.88
gi|4506751 restin isoform a [Homo sapiens] 32 0.88
gi|55741677 SET domain containing 1A [Homo sapiens] 32 1.2
gi|55749621 pleckstrin homology domain containing, family G, mem... 32 1.2
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 32 1.2
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 31 1.5
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 31 1.5
gi|4505677 phosphodiesterase 1B [Homo sapiens] 31 1.5
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 31 1.5
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 31 1.5
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 31 1.5
gi|116517224 coiled-coil domain containing 144B [Homo sapiens] 31 1.5
gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens] 31 2.0
gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens] 31 2.0
gi|70906435 fibrinogen, beta chain preproprotein [Homo sapiens] 31 2.0
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 30 2.6
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 30 3.4
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 30 3.4
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 30 4.4
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 30 4.4
gi|224458301 family with sequence similarity 186, member A [Homo... 29 5.7
>gi|162809336 hypothetical protein LOC284611 [Homo sapiens]
Length = 360
Score = 713 bits (1840), Expect = 0.0
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVRWRKKF 60
MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVRWRKKF
Sbjct: 1 MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVRWRKKF 60
Query: 61 SFMCKMSASAATGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLE 120
SFMCKMSASAATGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLE
Sbjct: 61 SFMCKMSASAATGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLE 120
Query: 121 GYDTKNTRQDNSILKVLISMQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLKV 180
GYDTKNTRQDNSILKVLISMQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLKV
Sbjct: 121 GYDTKNTRQDNSILKVLISMQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLKV 180
Query: 181 HLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSV 240
HLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSV
Sbjct: 181 HLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSV 240
Query: 241 GSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTR 300
GSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTR
Sbjct: 241 GSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTR 300
Query: 301 VDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRVGSGAYEQVVIKR 360
VDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRVGSGAYEQVVIKR
Sbjct: 301 VDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRVGSGAYEQVVIKR 360
>gi|78191787 early estrogen-induced gene 1 protein isoform a [Homo
sapiens]
Length = 384
Score = 404 bits (1037), Expect = e-113
Identities = 224/390 (57%), Positives = 267/390 (68%), Gaps = 42/390 (10%)
Query: 1 MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVRWRKKF 60
+MKKKKFKF+ F LEEL++VPFVNGVLFCK+RLLDGG F + SSRE VQ NCVRWRK+F
Sbjct: 4 LMKKKKFKFQTTFTLEELTAVPFVNGVLFCKVRLLDGGDFVSLSSREEVQENCVRWRKRF 63
Query: 61 SFMCKMSASAATGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLE 120
+F+CKMSA+ ATG+LDPC++RVSVRKELKGGKAY+KLGFADLNLAEFAGSG+T R CLLE
Sbjct: 64 TFVCKMSANPATGLLDPCVFRVSVRKELKGGKAYSKLGFADLNLAEFAGSGSTVRCCLLE 123
Query: 121 GYDTKNTRQDNSILKVLISMQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLK- 179
GYDTKNTRQDNSILKV I M L+SGDPCFKTPPST+ SI I G+ SLQ KGG T
Sbjct: 124 GYDTKNTRQDNSILKVTIGMFLLSGDPCFKTPPSTAKSISIPGQDSSLQLTCKGGGTSSG 183
Query: 180 -------------------VHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYS 220
+ G+ + ++ S P+E+ GHSR SSYASQQSK+SGYS
Sbjct: 184 GSSTNSLTGSRPPKARPTILSSGLPEEPDQNLSSPEEVFHSGHSRNSSYASQQSKISGYS 243
Query: 221 TCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLS 280
T HSRSSS S+L HRRNTS S+++G + + P + +++E EK
Sbjct: 244 TEHSRSSSLSDLTHRRNTSTSSSASG---------GLGMTVEGP--EGSEREHRPPEKPP 292
Query: 281 RCP-----------VKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAEEEGLRL 329
R P K+DSVES VDDTR+DAD IVEKI+QSQDF+ S+ E+ LRL
Sbjct: 293 RPPRPLHLSDRSFRRKKDSVESHPTWVDDTRIDADAIVEKIVQSQDFTDGSNTEDSNLRL 352
Query: 330 FVGPGGSTTFGSHHLPNRVGSGAYEQVVIK 359
FV GS T L RV SG YE VVI+
Sbjct: 353 FVSRDGSATLSGIQLATRVSSGVYEPVVIE 382
>gi|42558264 early estrogen-induced gene 1 protein isoform b [Homo
sapiens]
Length = 242
Score = 175 bits (444), Expect = 5e-44
Identities = 113/251 (45%), Positives = 141/251 (56%), Gaps = 42/251 (16%)
Query: 140 MQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLK-------------------- 179
M L+SGDPCFKTPPST+ SI I G+ SLQ KGG T
Sbjct: 1 MFLLSGDPCFKTPPSTAKSISIPGQDSSLQLTCKGGGTSSGGSSTNSLTGSRPPKARPTI 60
Query: 180 VHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTS 239
+ G+ + ++ S P+E+ GHSR SSYASQQSK+SGYST HSRSSS S+L HRRNTS
Sbjct: 61 LSSGLPEEPDQNLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHSRSSSLSDLTHRRNTS 120
Query: 240 VGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPV-----------KQDS 288
S+++G + + P + +++E EK R P K+DS
Sbjct: 121 TSSSASG---------GLGMTVEGP--EGSEREHRPPEKPPRPPRPLHLSDRSFRRKKDS 169
Query: 289 VESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRV 348
VES VDDTR+DAD IVEKI+QSQDF+ S+ E+ LRLFV GS T L RV
Sbjct: 170 VESHPTWVDDTRIDADAIVEKIVQSQDFTDGSNTEDSNLRLFVSRDGSATLSGIQLATRV 229
Query: 349 GSGAYEQVVIK 359
SG YE VVI+
Sbjct: 230 SSGVYEPVVIE 240
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 33.5 bits (75), Expect = 0.30
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 179 KVHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNT 238
K H + + +S +C S+TSS S QS + ++C+ +SS S C +++
Sbjct: 9 KQHRASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRISSTCSCQSS 68
Query: 239 SVGSTSTGVES 249
STS +S
Sbjct: 69 GTSSTSCSCQS 79
Score = 32.3 bits (72), Expect = 0.68
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C SRTSS S Q+ + ++C +SS S C +++ STS
Sbjct: 122 SCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNW 181
Query: 248 ES 249
+S
Sbjct: 182 QS 183
Score = 32.0 bits (71), Expect = 0.88
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C +SS S C +++ STS
Sbjct: 191 SCQSSGTSSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSW 250
Query: 248 ES 249
+S
Sbjct: 251 QS 252
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVES 249
SRTSS S QS + ++C +SS S C +++ STS +S
Sbjct: 253 SRTSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQS 298
Score = 31.2 bits (69), Expect = 1.5
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C +SS S C +++ STS
Sbjct: 214 SCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSRTSSTSCSC 273
Query: 248 ES 249
+S
Sbjct: 274 QS 275
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTS 244
S +S+ +C SRTSS S Q + ++C +SS S C +++ STS
Sbjct: 283 SCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTS 339
Score = 30.8 bits (68), Expect = 2.0
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVES 249
SRTSS S QS + ++C+ +SS S C +++ STS +S
Sbjct: 161 SRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYSCQS 206
Score = 30.0 bits (66), Expect = 3.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C + S S C +++ STS
Sbjct: 64 SCQSSGTSSTSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQSSRTSSTSCSC 123
Query: 248 ES 249
+S
Sbjct: 124 QS 125
Score = 30.0 bits (66), Expect = 3.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C +SS S C + + STS
Sbjct: 260 SCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSC 319
Query: 248 ES 249
+S
Sbjct: 320 QS 321
Score = 28.5 bits (62), Expect = 9.8
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 201 CGHSRTSSYA-SQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVES 249
C SRTSS + S QS + ++C +SS S C + + STS +S
Sbjct: 111 CQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQS 160
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 32.7 bits (73), Expect = 0.52
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 179 KVHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNT 238
K H + + +S +C S+TSS S QS + ++C+ +SS S C +++
Sbjct: 9 KQHRASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSS 68
Query: 239 SVGSTSTGVES 249
STS +S
Sbjct: 69 GTSSTSCSCQS 79
Score = 32.3 bits (72), Expect = 0.68
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C SRTSS S Q+ + ++C +SS S C +++ STS
Sbjct: 122 SCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNW 181
Query: 248 ES 249
+S
Sbjct: 182 QS 183
Score = 32.0 bits (71), Expect = 0.88
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C +SS S C +++ STS
Sbjct: 191 SCQSSGTSSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSW 250
Query: 248 ES 249
+S
Sbjct: 251 QS 252
Score = 31.6 bits (70), Expect = 1.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C +SS S C +++ STS
Sbjct: 214 SCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCSC 273
Query: 248 ES 249
+S
Sbjct: 274 QS 275
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVES 249
SRTSS S QS + ++C +SS S C +++ STS +S
Sbjct: 253 SRTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQS 298
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTS 244
S +S+ +C SRTSS S Q + ++C +SS S C +++ STS
Sbjct: 283 SCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTS 339
Score = 30.8 bits (68), Expect = 2.0
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVES 249
SRTSS S QS + ++C+ +SS S C +++ STS +S
Sbjct: 161 SRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYSCQS 206
Score = 30.4 bits (67), Expect = 2.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C +SS S C + + STS
Sbjct: 260 SCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSC 319
Query: 248 ES 249
+S
Sbjct: 320 QS 321
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTS 244
SRTSS S QS + ++C +SS S C +++ STS
Sbjct: 57 SRTSSTCSCQSSGTSSTSCSCQSSETSSTCSCQSSGTSSTS 97
Score = 28.9 bits (63), Expect = 7.5
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S +S+ +C S TSS S QS + ++C + S S C +++ STS
Sbjct: 64 SCQSSGTSSTSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCCCQSSRTSSTSCSC 123
Query: 248 ES 249
+S
Sbjct: 124 QS 125
Score = 28.5 bits (62), Expect = 9.8
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 201 CGHSRTSSYA-SQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVES 249
C SRTSS + S QS + ++C +SS S C + + STS +S
Sbjct: 111 CQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQS 160
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 32.7 bits (73), Expect = 0.52
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 143 MSGDPCFKTPPSTSMSIPIAGESE---SLQEDRKGGETLKVHLGIADLSAKSASVPDELG 199
++G F+ PP + PI K +T ++ +G++ L+ +S
Sbjct: 264 VAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKTKRMAMGVSALTHSPSS------ 317
Query: 200 ACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQ 259
S SS +S S V G SRS +E R + T+ E++ E IEQ
Sbjct: 318 ----SSISSVSSVASSVGGRP---SRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQ 370
Query: 260 KIAEPNLDTADKEDTASEKLSRCPVKQDSV------ESQLKRVDDTRVDADDIVEKILQS 313
+AE +L+ A+ S C V+++ E + ++ A +VE + +
Sbjct: 371 LLAERDLERAEVAKATSH---ICEVEKEIALLKAQHEQYVAEAEEKLQRARLLVESV-RK 426
Query: 314 QDFSLDSSAEEE 325
+ L + EEE
Sbjct: 427 EKVDLSNQLEEE 438
>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
[Homo sapiens]
Length = 1011
Score = 32.7 bits (73), Expect = 0.52
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 143 MSGDPCFKTPPSTSMSIPIAGESE---SLQEDRKGGETLKVHLGIADLSAKSASVPDELG 199
++G F+ PP + PI K +T ++ +G++ L+ +S
Sbjct: 264 VAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKTKRMAMGVSALTHSPSS------ 317
Query: 200 ACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQ 259
S SS +S S V G SRS +E R + T+ E++ E IEQ
Sbjct: 318 ----SSISSVSSVASSVGGRP---SRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQ 370
Query: 260 KIAEPNLDTADKEDTASEKLSRCPVKQDSV------ESQLKRVDDTRVDADDIVEKILQS 313
+AE +L+ A+ S C V+++ E + ++ A +VE + +
Sbjct: 371 LLAERDLERAEVAKATSH---ICEVEKEIALLKAQHEQYVAEAEEKLQRARLLVESV-RK 426
Query: 314 QDFSLDSSAEEE 325
+ L + EEE
Sbjct: 427 EKVDLSNQLEEE 438
>gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo
sapiens]
Length = 770
Score = 32.3 bits (72), Expect = 0.68
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 164 ESESLQEDRKGGETLKVHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCH 223
E + L++ R+ T + AD S S+S + GH R + +S+ S S H
Sbjct: 464 EEKRLKKKRRKS-TSSSSVSSADESVSSSS---SSSSSGHKRHKKHKRNRSESSRSSRRH 519
Query: 224 SRSSSFSELCHRRNTSVGSTSTGVE-SILEPCDEIEQKIAEPNLDTADKEDTASEKLSRC 282
S +S +++ R S L E+E+ + + D E T ++ RC
Sbjct: 520 SSRASSNQIDQNRKDECYPVPANTSASFLNHKQEVEKLLGKQ--DRLQYEKTQIKEKDRC 577
Query: 283 PVKQDSVE 290
P+ S+E
Sbjct: 578 PLSSSSLE 585
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 32.3 bits (72), Expect = 0.68
Identities = 42/198 (21%), Positives = 74/198 (37%), Gaps = 45/198 (22%)
Query: 188 SAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGV 247
S++S+S +C HSR+ S +S S +C S SSS S +S S+S+
Sbjct: 2144 SSRSSSSSSS-SSCSHSRSGSSSSSSS------SCSSASSSSS-------SSTSSSSSSS 2189
Query: 248 ESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDA---- 303
S E D E++ A+ T + E ++ QD + + + T A
Sbjct: 2190 SSSSEESDSDEEE-AQKRESTTHMKAYDEESVASLSTTQDETQDSFQMNNGTPESAYILQ 2248
Query: 304 --------------------DDIVEKILQS------QDFSLDSSAEEEGLRLFVGPGGST 337
D I + +L+ + + ++ A +L PG +T
Sbjct: 2249 GGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDANTVASFYTTKLLDSPGAAT 2308
Query: 338 TFGSHHLPNRVGSGAYEQ 355
+ +P G+G E+
Sbjct: 2309 EYSDPSVPTPPGAGVKEE 2326
Score = 31.6 bits (70), Expect = 1.2
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 203 HSRTSSYASQQSKVSGYSTCHSRSSSFSE---LCHRRNTSVGSTSTGVESILEPCDEIEQ 259
H R S +S S S+C SRSSS S H R+ S S+S+ S
Sbjct: 2124 HKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSS---------- 2173
Query: 260 KIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDA--DDIVEKILQSQDFS 317
A + ++ ++S S D E+Q KR T + A ++ V + +QD +
Sbjct: 2174 --ASSSSSSSTSSSSSSSSSSSEESDSDEEEAQ-KRESTTHMKAYDEESVASLSTTQDET 2230
Query: 318 LDSSAEEEGL--RLFVGPGGSTTFGSHHLPNRV 348
DS G ++ GG S+ +RV
Sbjct: 2231 QDSFQMNNGTPESAYILQGGYMLAASYWPKDRV 2263
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 32.0 bits (71), Expect = 0.88
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 207 SSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNL 266
SS +S S S S+ SR+ +E R + T+ E++ E IEQ +AE +L
Sbjct: 314 SSLSSMSSVASSVSSRPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDL 373
Query: 267 DTAD 270
+ A+
Sbjct: 374 ERAE 377
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 32.0 bits (71), Expect = 0.88
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 207 SSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNL 266
SS +S S S S+ SR+ +E R + T+ E++ E IEQ +AE +L
Sbjct: 314 SSLSSMSSVASSVSSRPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDL 373
Query: 267 DTAD 270
+ A+
Sbjct: 374 ERAE 377
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 31.6 bits (70), Expect = 1.2
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 165 SESLQEDRKGGETLKVHLGIADLSAKSASVPD--ELGACGHSRTSSYASQQSKVSGYSTC 222
SE +ED + E + D + K V D + + S+ S YA + S
Sbjct: 974 SEKDEEDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDS 1033
Query: 223 HSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKE 272
S SSS S ++S S+S+ ES E +E E+ A P+ +E
Sbjct: 1034 ESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPRE 1083
>gi|55749621 pleckstrin homology domain containing, family G, member
3 [Homo sapiens]
Length = 1163
Score = 31.6 bits (70), Expect = 1.2
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 15/180 (8%)
Query: 119 LEGYDTKNTRQDNSILKVLISMQLMSGDPCFKTPPSTSMSIPIAGES-------ESLQED 171
+EG + T D +VL QL + P M +A ES S +E+
Sbjct: 467 VEGPSAEETPSDTESPEVL-ETQLDAHQGLLGMDPPGDMVDFVAAESTEDLKALSSEEEE 525
Query: 172 RKGGETLKVHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCH--SRSSSF 229
GG + + ASV E SR SS A + SK SG+ + SRSSS
Sbjct: 526 EMGGAAQEPESLLPPSVLDQASVIAERFVSSFSRRSSVAQEDSKSSGFGSPRLVSRSSSV 585
Query: 230 SEL--CHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQD 287
L + GS + + L P +I +A + + + + S CPV+ D
Sbjct: 586 LSLEGSEKGLARHGSATDSLSCQLSPEVDISVGVATEDSPSVNGMEPPS---PGCPVEPD 642
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 31.6 bits (70), Expect = 1.2
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 195 PDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPC 254
P+ A R+SS +S S S S+ S SSS S ++S S+S+ S +P
Sbjct: 2596 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPG 2655
Query: 255 DEIEQKIAEPNLDTADKEDTASEKLSRCPVK 285
+ K A P K+ E+ SR P K
Sbjct: 2656 PQALPKPASP------KKPPPGERRSRSPRK 2680
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 31.2 bits (69), Expect = 1.5
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 260 KIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLK---RVDDTRVDADDIVEKILQSQDF 316
K+ +PN + +++DT+SE +S + DS + K R + + A D+ +KI Q
Sbjct: 843 KVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKSSS 902
Query: 317 SLDSSAEEEGLR 328
L E G R
Sbjct: 903 LLRHKYEHTGKR 914
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 31.2 bits (69), Expect = 1.5
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 260 KIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLK---RVDDTRVDADDIVEKILQSQDF 316
K+ +PN + +++DT+SE +S + DS + K R + + A D+ +KI Q
Sbjct: 859 KVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKSSS 918
Query: 317 SLDSSAEEEGLR 328
L E G R
Sbjct: 919 LLRHKYEHTGKR 930
>gi|4505677 phosphodiesterase 1B [Homo sapiens]
Length = 536
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 229 FSELCHRRNTSVGSTSTG-VESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQD 287
FS LC R +T V + G ++ I+EP + +AE ++ ED+ S+ +Q
Sbjct: 406 FSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADEDSKSKNQPSFQWRQP 465
Query: 288 SVESQL 293
S++ ++
Sbjct: 466 SLDVEV 471
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 31.2 bits (69), Expect = 1.5
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAE 263
SR+ SY+ ++ ++ HSRS S S H RN + S + + A+
Sbjct: 697 SRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISSDDGRRAK 756
Query: 264 PNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAE 323
L ++ K+++ S K S E L D V K +S+ SLD S++
Sbjct: 757 RRLRSSGKKNSVSHK-----KHSSSSEKTLHSKYVKGRDRSSCVRKYSESRS-SLDYSSD 810
Query: 324 EE 325
E
Sbjct: 811 SE 812
Score = 28.5 bits (62), Expect = 9.8
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 26/188 (13%)
Query: 76 DPCIYRVSVRKELKGGKAYAKLGF-ADLNLAEFAGSGNTTRR-----CLLEGYDTKNTRQ 129
DPC R R + ++++ G+ +DL+ A +G R+ +G K+ R+
Sbjct: 391 DPCSSRWDERSLSQRSRSWSYNGYYSDLSTARHSGHHKKRRKEKKVKHKKKGKKQKHCRR 450
Query: 130 DNSILK--VLISMQLMSGDPCFKTPPST------SMSIPIAGESESLQEDRKGGETLKVH 181
K +LI + S + S+ S S ++ S ++ K + ++
Sbjct: 451 HKQTKKRRILIPSDIESSKSSTRRMKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQ-- 508
Query: 182 LGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSS----FSELCHRRN 237
S+ + S D + HS++ S S +S+ + S+ HSRS S S+ HR+
Sbjct: 509 ------SSLTHSSRDSYRSKSHSQSYSRGSSRSRTASKSSSHSRSRSKSRSSSKSGHRKR 562
Query: 238 TSVGSTST 245
S T
Sbjct: 563 ASKSPRKT 570
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 31.2 bits (69), Expect = 1.5
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 12/138 (8%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAE 263
SR+S + ++ Y + H SS S NT + GVE +E +E+E+ E
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTE--NEEEGVEEDVEEDEEVEEDAEE 221
Query: 264 PNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAE 323
D E+ E +++ E + + ++ D D E + D+ S A
Sbjct: 222 DEEVDEDGEEEEEE-------EEEEEEEEEEEEEEYEQDERDQKE---EGNDYDTRSEAS 271
Query: 324 EEGLRLFVGPGGSTTFGS 341
+ G GS GS
Sbjct: 272 DSGSESVSFTDGSVRSGS 289
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 31.2 bits (69), Expect = 1.5
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 12/138 (8%)
Query: 204 SRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAE 263
SR+S + ++ Y + H SS S NT + GVE +E +E+E+ E
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTE--NEEEGVEEDVEEDEEVEEDAEE 221
Query: 264 PNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAE 323
D E+ E +++ E + + ++ D D E + D+ S A
Sbjct: 222 DEEVDEDGEEEEEE-------EEEEEEEEEEEEEEYEQDERDQKE---EGNDYDTRSEAS 271
Query: 324 EEGLRLFVGPGGSTTFGS 341
+ G GS GS
Sbjct: 272 DSGSESVSFTDGSVRSGS 289
>gi|116517224 coiled-coil domain containing 144B [Homo sapiens]
Length = 725
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 231 ELCHR-RNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSV 289
E C R +N VG S V + +++ + NL +K DT LS D
Sbjct: 150 ETCQRSKNLKVGDKSPSVSPSMPENQSATKELGQMNLTEREKMDTGVVLLSGNDTLHDLC 209
Query: 290 ESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAEEEGLR 328
+SQL +++ QD L S E+E L+
Sbjct: 210 QSQLPENKESKE----------AEQDLELTSEEEQERLK 238
>gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens]
Length = 1111
Score = 30.8 bits (68), Expect = 2.0
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 210 ASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTST-------GVESILEPCDEIEQKIA 262
A + + S + S S+ + ++GS + G LE EIEQ+I
Sbjct: 967 AEAEEAMKRLSYISQKVSDASDKTQQAERALGSAAADAQRAKNGAGEALEISSEIEQEIG 1026
Query: 263 EPNLD---TADKEDTASEKLSRCPVKQDSVESQLKRVD---DTRVDADDIVEKILQSQDF 316
NL+ TAD + L+ + VE +L+R + DT +DA +V I ++Q
Sbjct: 1027 SLNLEANVTADGALAMEKGLASLKSEMREVEGELERKELEFDTNMDAVQMV--ITEAQ-- 1082
Query: 317 SLDSSAEEEGLRL 329
+D+ A+ G+ +
Sbjct: 1083 KVDTRAKNAGVTI 1095
>gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens]
Length = 1193
Score = 30.8 bits (68), Expect = 2.0
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 210 ASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTST-------GVESILEPCDEIEQKIA 262
A + + S + S S+ + ++GS + G LE EIEQ+I
Sbjct: 967 AEAEEAMKRLSYISQKVSDASDKTQQAERALGSAAADAQRAKNGAGEALEISSEIEQEIG 1026
Query: 263 EPNLD---TADKEDTASEKLSRCPVKQDSVESQLKRVD---DTRVDADDIVEKILQSQDF 316
NL+ TAD + L+ + VE +L+R + DT +DA +V I ++Q
Sbjct: 1027 SLNLEANVTADGALAMEKGLASLKSEMREVEGELERKELEFDTNMDAVQMV--ITEAQ-- 1082
Query: 317 SLDSSAEEEGLRL 329
+D+ A+ G+ +
Sbjct: 1083 KVDTRAKNAGVTI 1095
>gi|70906435 fibrinogen, beta chain preproprotein [Homo sapiens]
Length = 491
Score = 30.8 bits (68), Expect = 2.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 150 KTPPSTSMSIPIAGESESLQEDRKGGETLKVHLGIADLSAK 190
+TP + S +IP+ E + RKGGET +++L D S K
Sbjct: 224 RTPCTVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVK 264
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 30.4 bits (67), Expect = 2.6
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 239 SVGSTSTGVESILEPCD---EIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKR 295
S+GS +ESI D E+ K E N + DK+D + +K ++ E + K
Sbjct: 468 SLGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKS 527
Query: 296 VDDTRVDADDIVEKILQSQDFSLDSSAEEE 325
D+T + D+ E+ + ++ + E++
Sbjct: 528 GDETNKEEDEDDEEAEEEEEEEEEEEDEDD 557
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 30.0 bits (66), Expect = 3.4
Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 8/177 (4%)
Query: 138 ISMQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLKVHLGIADLSAKSASVPDE 197
+ +Q S PPS + +A + Q ++ G L S K VP E
Sbjct: 484 LQLQSQSQPVLQSQPPSQPEDLSLAVLQPTPQVTQEQGHLLPERKDFPVESVKLTEVPVE 543
Query: 198 LGACGHSRTSSYASQQSKVSGY-------STCHSRSSSFSELCHRRNTSVGSTSTGVESI 250
H + S +S+ G S S SSS S ++S S+S+G S
Sbjct: 544 PVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSS 603
Query: 251 LEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKR-VDDTRVDADDI 306
+ D++ ++SE SR + + + + +R VD R D +
Sbjct: 604 RSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGL 660
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 185 ADLSAKSASVPDELGACGHSRT-------SSYASQQSKVSGYSTCHSRSSSFS 230
A S++S+S G SR+ SSY+S+ S+ S +S SRS SFS
Sbjct: 551 ASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFS 603
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 29.6 bits (65), Expect = 4.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 267 DTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAE-EE 325
D++D++D E R ++ + K DD D+DD++E + D D+S E+
Sbjct: 206 DSSDEDDDDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTGEGVDEQQDNSETIEK 265
Query: 326 GLRLFVGPGGST 337
L +G G+T
Sbjct: 266 VLDSRLGKKGAT 277
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 29.6 bits (65), Expect = 4.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 267 DTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAE-EE 325
D++D++D E R ++ + K DD D+DD++E + D D+S E+
Sbjct: 206 DSSDEDDDDDEAPKRQTRRRAAKNVSYKEDDDFETDSDDLIEMTGEGVDEQQDNSETIEK 265
Query: 326 GLRLFVGPGGST 337
L +G G+T
Sbjct: 266 VLDSRLGKKGAT 277
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 29.3 bits (64), Expect = 5.7
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 223 HSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRC 282
H+R++ L +NT G + + +L D+ +K+ + +K+ + +K ++C
Sbjct: 2166 HARNNIMKRLKAIQNTGKGYEARNLHMMLSRLDDYGKKVMQV---WTEKQKSLGQKRNQC 2222
Query: 283 PVKQDSVESQLKRVDD 298
K V +QLK++ +
Sbjct: 2223 LKKMIHVFNQLKKIHE 2238
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,812,214
Number of Sequences: 37866
Number of extensions: 526781
Number of successful extensions: 1525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1447
Number of HSP's gapped (non-prelim): 84
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.