Guide to the Human Genome
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Name: FAM102B Sequence: fasta or formatted (360aa) NCBI GI: 162809336
Description:

hypothetical protein LOC284611

Referenced in:

Additional Signal Responses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         22           2
 C cysteine            3.1         11           1
 D aspartate           6.1         22           2
 E glutamate           7.5         27           3
 F phenylalanine       4.2         15           1
 G glycine             7.5         27           2
 H histidine           1.7          6           2
 I isoleucine          3.6         13           1
 K lysine              7.8         28           4
 L leucine             8.3         30           2
 M methionine          2.2          8           2
 N asparagine          2.5          9           1
 P proline             3.3         12           2
 Q glutamine           3.3         12           2
 R arginine            5.6         20           2
 S serine             13.3         48           3
 T threonine           5.3         19           2
 V valine              6.7         24           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC284611 
FAM102A               0.551   early estrogen-induced gene 1 protein isoform a [Hom...
FAM102A               0.218   early estrogen-induced gene 1 protein isoform b [Hom...
LOC729815             0.012   PREDICTED: hypothetical protein 
LOC729815             0.012   PREDICTED: hypothetical protein 
CLIP2                 0.012   CAP-GLY domain containing linker protein 2 isoform ...
CLIP2                 0.012   CAP-GLY domain containing linker protein 2 isoform 2...
TTC14                 0.010   tetratricopeptide repeat domain 14 isoform a 
CHD9                  0.010   chromodomain helicase DNA binding protein 9 
CLIP1                 0.010   restin isoform b 
CLIP1                 0.010   restin isoform a 
SETD1A                0.010   SET domain containing 1A 
PLEKHG3               0.010   pleckstrin homology domain containing, family G, mem...
SRRM2                 0.010   splicing coactivator subunit SRm300 
ZEB1                  0.009   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.009   zinc finger E-box binding homeobox 1 isoform b [Hom...
PDE1B                 0.009   phosphodiesterase 1B 
NKTR                  0.009   natural killer-tumor recognition sequence 
YTHDC1                0.009   splicing factor YT521-B isoform 2 
YTHDC1                0.009   splicing factor YT521-B isoform 1 
CCDC144B              0.009   coiled-coil domain containing 144B 
LAMC2                 0.009   laminin, gamma 2 isoform b precursor 
LAMC2                 0.009   laminin, gamma 2 isoform a precursor 
FGB                   0.009   fibrinogen, beta chain preproprotein 
ARID4B                0.007   AT rich interactive domain 4B isoform 1 
PNN                   0.007   pinin, desmosome associated protein 
ZC3H18                0.007   zinc finger CCCH-type containing 18 
CHD2                  0.007   chromodomain helicase DNA binding protein 2 isoform...
CHD2                  0.007   chromodomain helicase DNA binding protein 2 isoform...
FAM186A               0.006   family with sequence similarity 186, member A [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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