Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 158966717
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|158966717 gap junction protein, beta 6 [Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|159032020 gap junction protein, beta 6 [Homo sapiens] 547 e-156
gi|158966714 gap junction protein, beta 6 [Homo sapiens] 547 e-156
gi|158966717 gap junction protein, beta 6 [Homo sapiens] 547 e-156
gi|40254837 gap junction protein, beta 6 [Homo sapiens] 547 e-156
gi|42558283 gap junction protein beta 2 [Homo sapiens] 381 e-106
gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens] 322 2e-88
gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens] 322 2e-88
gi|23397464 gap junction protein, beta 4 [Homo sapiens] 257 8e-69
gi|54607056 connexin 31 [Homo sapiens] 255 3e-68
gi|13128960 connexin 31 [Homo sapiens] 255 3e-68
gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens] 253 2e-67
gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens] 233 1e-61
gi|55953076 connexin 50 [Homo sapiens] 229 1e-60
gi|62865885 connexin 37 [Homo sapiens] 215 3e-56
gi|22779877 connexin 46 [Homo sapiens] 214 5e-56
gi|4504001 connexin 43 [Homo sapiens] 206 1e-53
gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 205 3e-53
gi|32483412 connexin 40 [Homo sapiens] 198 5e-51
gi|6631083 connexin 40 [Homo sapiens] 198 5e-51
gi|14211941 gap junction protein, alpha 10 [Homo sapiens] 196 2e-50
gi|122939172 connexin 45 [Homo sapiens] 160 1e-39
gi|69122473 connexin 45 [Homo sapiens] 160 1e-39
gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens] 153 2e-37
gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens] 147 9e-36
gi|145699105 connexin40.1 [Homo sapiens] 135 5e-32
gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens] 127 1e-29
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 112 3e-25
gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens] 83 2e-16
gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens] 83 2e-16
gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens] 83 2e-16
>gi|159032020 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 547 bits (1409), Expect = e-156
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK
Sbjct: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
Query: 241 QNEMNELISDSGQNAITGFPS 261
QNEMNELISDSGQNAITGFPS
Sbjct: 241 QNEMNELISDSGQNAITGFPS 261
>gi|158966714 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 547 bits (1409), Expect = e-156
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK
Sbjct: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
Query: 241 QNEMNELISDSGQNAITGFPS 261
QNEMNELISDSGQNAITGFPS
Sbjct: 241 QNEMNELISDSGQNAITGFPS 261
>gi|158966717 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 547 bits (1409), Expect = e-156
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK
Sbjct: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
Query: 241 QNEMNELISDSGQNAITGFPS 261
QNEMNELISDSGQNAITGFPS
Sbjct: 241 QNEMNELISDSGQNAITGFPS 261
>gi|40254837 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 547 bits (1409), Expect = e-156
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC
Sbjct: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED
Sbjct: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC
Sbjct: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK
Sbjct: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKESK 240
Query: 241 QNEMNELISDSGQNAITGFPS 261
QNEMNELISDSGQNAITGFPS
Sbjct: 241 QNEMNELISDSGQNAITGFPS 261
>gi|42558283 gap junction protein beta 2 [Homo sapiens]
Length = 226
Score = 381 bits (979), Expect = e-106
Identities = 173/224 (77%), Positives = 201/224 (89%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDWGTL T +GGVNKHSTSIGK+W+TV+FIFR+MILVVAA+EVWGDEQ DFVCNTLQPGC
Sbjct: 1 MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
KNVCYDH+FP+SHIRLWALQLIFVSTPALLVAMHVAY RHE RKF +GE +++FKDIE+
Sbjct: 61 KNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIKGEIKSEFKDIEE 120
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
IK QKVRIEGSLWWTYTSSIFFR+IFEAAFMYVFY +Y+G+ + ++KC PCPN VDC
Sbjct: 121 IKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDC 180
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKR 224
F+SRPTEKTVFT+FMI+ S IC+LLNV ELCYLL++ C +SK+
Sbjct: 181 FVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKK 224
>gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 322 bits (826), Expect = 2e-88
Identities = 148/255 (58%), Positives = 197/255 (77%), Gaps = 6/255 (2%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M+W L+T + GVN+HST+IG+VW++VIFIFR+M+LVVAA+ VWGDE+ F+CNTLQPGC
Sbjct: 1 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
+VCYD FFP+SH+RLW+LQLI VSTPALLVAMHVA+ +H +K R E D +E+
Sbjct: 61 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE 119
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
+K+ KV I G+LWWTY S+ FR++FEA FMYVFY LY GY + ++KC + PCPN VDC
Sbjct: 120 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC 179
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHP----NHAL 236
F+SRPTEKTVFT+FM++AS IC++LNVAE+ YL+++ C RR++R + H L
Sbjct: 180 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL 239
Query: 237 K-ESKQNEMNELISD 250
E KQNE+N+L+S+
Sbjct: 240 SPEYKQNEINKLLSE 254
>gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 322 bits (826), Expect = 2e-88
Identities = 148/255 (58%), Positives = 197/255 (77%), Gaps = 6/255 (2%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M+W L+T + GVN+HST+IG+VW++VIFIFR+M+LVVAA+ VWGDE+ F+CNTLQPGC
Sbjct: 1 MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
+VCYD FFP+SH+RLW+LQLI VSTPALLVAMHVA+ +H +K R E D +E+
Sbjct: 61 NSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQH-IEKKMLRLEGHGDPLHLEE 119
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
+K+ KV I G+LWWTY S+ FR++FEA FMYVFY LY GY + ++KC + PCPN VDC
Sbjct: 120 VKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDC 179
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHP----NHAL 236
F+SRPTEKTVFT+FM++AS IC++LNVAE+ YL+++ C RR++R + H L
Sbjct: 180 FVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRL 239
Query: 237 K-ESKQNEMNELISD 250
E KQNE+N+L+S+
Sbjct: 240 SPEYKQNEINKLLSE 254
>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
Length = 266
Score = 257 bits (656), Expect = 8e-69
Identities = 117/218 (53%), Positives = 158/218 (72%), Gaps = 5/218 (2%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M+W L + GVNK+ST + ++W++V+FIFRV++ VVAA+EVW DEQ+DFVCNT QPGC
Sbjct: 1 MNWAFLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
NVCYD FFPVSH+RLWALQLI V+ P+LLV MHVA YR E RK N ++
Sbjct: 61 PNVCYDEFFPVSHVRLWALQLILVTCPSLLVVMHVA-YREERERKHHLKHGPNAPSLYDN 119
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
+ K++ G LWWTY S+ F+ +A F+Y+F+ LY Y +P V+ C ++PCP+ VDC
Sbjct: 120 LSKKR----GGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACSVEPCPHTVDC 175
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVC 218
+ISRPTEK VFT FM++ + IC+LLN++E+ YL+ K C
Sbjct: 176 YISRPTEKKVFTYFMVTTAAICILLNLSEVFYLVGKRC 213
>gi|54607056 connexin 31 [Homo sapiens]
Length = 270
Score = 255 bits (651), Expect = 3e-68
Identities = 112/215 (52%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDW TL + GVNK+ST+ G++W++V+F+FRV++ VVAA+ VWGDEQ+DF CNT QPGC
Sbjct: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
NVCYD++FP+S+IRLWALQLIFV+ P+LLV +HVA YR E R+ R+ K ++
Sbjct: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVA-YREERERRHRQKHGDQCAKLYDN 119
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKC-GIDPCPNLVD 179
K+ G LWWTY S+ F++I E F+Y+ + L++G+++P +++C + PCPN+VD
Sbjct: 120 AGKK----HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD 175
Query: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLL 214
C+I+RPTEK +FT FM+ AS +C++L + ELCYL+
Sbjct: 176 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
>gi|13128960 connexin 31 [Homo sapiens]
Length = 270
Score = 255 bits (651), Expect = 3e-68
Identities = 112/215 (52%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
MDW TL + GVNK+ST+ G++W++V+F+FRV++ VVAA+ VWGDEQ+DF CNT QPGC
Sbjct: 1 MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
NVCYD++FP+S+IRLWALQLIFV+ P+LLV +HVA YR E R+ R+ K ++
Sbjct: 61 TNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVA-YREERERRHRQKHGDQCAKLYDN 119
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKC-GIDPCPNLVD 179
K+ G LWWTY S+ F++I E F+Y+ + L++G+++P +++C + PCPN+VD
Sbjct: 120 AGKK----HGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVD 175
Query: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLL 214
C+I+RPTEK +FT FM+ AS +C++L + ELCYL+
Sbjct: 176 CYIARPTEKKIFTYFMVGASAVCIVLTICELCYLI 210
>gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens]
Length = 273
Score = 253 bits (645), Expect = 2e-67
Identities = 116/248 (46%), Positives = 165/248 (66%), Gaps = 9/248 (3%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M+W + GVNK+ST+ G++W++++FIFRV++ +V A+ VW D+ +DF CNT QPGC
Sbjct: 1 MNWSIFEGLLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
NVC+D FFPVSH+RLWALQLI V+ P+LLV MHVA YR ++ R N + +
Sbjct: 61 SNVCFDEFFPVSHVRLWALQLILVTCPSLLVVMHVA-YREVQEKRHREAHGENSGRLYLN 119
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
K++ G LWWTY S+ F+ + AF+YVF+ Y Y LP V+KC DPCPN+VDC
Sbjct: 120 PGKKR----GGLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDC 175
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFR----RSKRAQTQKNHPNHAL 236
FIS+P+EK +FT+FM++ + IC+LLN+ EL YL+ K C R +A +HP+
Sbjct: 176 FISKPSEKNIFTLFMVATAAICILLNLVELIYLVSKRCHECLAARKAQAMCTGHHPHGTT 235
Query: 237 KESKQNEM 244
KQ+++
Sbjct: 236 SSCKQDDL 243
>gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens]
Length = 223
Score = 233 bits (594), Expect = 1e-61
Identities = 106/219 (48%), Positives = 151/219 (68%), Gaps = 13/219 (5%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M W L + GVNK+ST G +W+ V+F+FR+++ +VAA+ VW DEQ++F CN+ QPGC
Sbjct: 1 MSWMFLRDLLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIED 120
KNVC+D FFP+S +RLWALQLI VSTP+LLV +HVAY HE K R +
Sbjct: 61 KNVCFDDFFPISQVRLWALQLIMVSTPSLLVVLHVAY--HEGREKRHR----------KK 108
Query: 121 IKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDC 180
+ ++G LW+ Y S+ + FE F+ +FY LY+G+ +P+++KC + PCPN VDC
Sbjct: 109 LYVSPGTMDGGLWYAYLISLIVKTGFEIGFLVLFYKLYDGFSVPYLIKCDLKPCPNTVDC 168
Query: 181 FISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCF 219
FIS+PTEKT+F +F++ S +C++LN EL +L+LK CF
Sbjct: 169 FISKPTEKTIFILFLVITSCLCIVLNFIELSFLVLK-CF 206
>gi|55953076 connexin 50 [Homo sapiens]
Length = 433
Score = 229 bits (585), Expect = 1e-60
Identities = 117/229 (51%), Positives = 152/229 (66%), Gaps = 15/229 (6%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L + VN+HST IG+VW+TV+FIFR++IL AA+ VWGDEQ DFVCNT QPGC+
Sbjct: 3 DWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPGCE 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYY-RHETTRKFRRGEK------RND 114
NVCYD FP+SHIRLW LQ+IFVSTP+L+ H +Y R E RK R E+ N
Sbjct: 63 NVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGTNG 122
Query: 115 FKDIEDIKK-------QKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVL 167
D +KK +K R+EG+L TY I F+ +FE F+ YFLY G+ + +
Sbjct: 123 GPDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLY-GFRILPLY 181
Query: 168 KCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLK 216
+C PCPN+VDCF+SRPTEKT+F +FM+S + + + LNV EL +L LK
Sbjct: 182 RCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLK 230
>gi|62865885 connexin 37 [Homo sapiens]
Length = 333
Score = 215 bits (548), Expect = 3e-56
Identities = 111/249 (44%), Positives = 150/249 (60%), Gaps = 20/249 (8%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DWG L + V +HST +GK+W+TV+FIFR++IL +A + VWGDEQ DF CNT QPGC
Sbjct: 3 DWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCT 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYY-RHETTRKFRRGEKR-------- 112
NVCYD FP+SHIR W LQ +FVSTP L+ HV Y R E + + GE R
Sbjct: 63 NVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKDPQ 122
Query: 113 ---------NDFKDIEDIKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHL 163
I + ++RI G+L TY +S+ + + EA F+Y + LY G+ +
Sbjct: 123 VERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY-GWTM 181
Query: 164 PWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSK 223
V C PCP LVDCF+SRPTEKT+F IFM+ +I ++LN+ EL +LL + C R
Sbjct: 182 EPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCR-CLSRGM 240
Query: 224 RAQTQKNHP 232
RA+ ++ P
Sbjct: 241 RARQGQDAP 249
>gi|22779877 connexin 46 [Homo sapiens]
Length = 435
Score = 214 bits (546), Expect = 5e-56
Identities = 107/231 (46%), Positives = 146/231 (63%), Gaps = 27/231 (11%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L + +HST IGKVW+TV+FIFR+++L AA++VWGDEQ DF CNT QPGC+
Sbjct: 3 DWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPGCE 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDI 121
NVCYD FP+SHIR WALQ+IFVSTP L+ HV + R EK+ + ++ E +
Sbjct: 63 NVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHI-------VRMEEKKKEREEEEQL 115
Query: 122 KKQ-------------------KVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYH 162
K++ +VR+ G+L TY +I F+ +FE F+ YFLY G+
Sbjct: 116 KRESPSPKEPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLY-GFE 174
Query: 163 LPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYL 213
L + +C PCPN VDCFISRPTEKT+F IFM++ + +LLN+ E+ +L
Sbjct: 175 LKPLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHL 225
>gi|4504001 connexin 43 [Homo sapiens]
Length = 382
Score = 206 bits (525), Expect = 1e-53
Identities = 109/252 (43%), Positives = 152/252 (60%), Gaps = 23/252 (9%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L + V +ST+ GKVW++V+FIFR+++L A + WGDEQ F CNT QPGC+
Sbjct: 3 DWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPGCE 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEK----RNDFKD 117
NVCYD FP+SH+R W LQ+IFVS P LL HV Y + + ++ E+ + D +
Sbjct: 63 NVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKVAQTDGVN 122
Query: 118 IE------DIKK--------QKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHL 163
++ +IKK KV++ G L TY SI F+ IFE AF+ + +++Y G+ L
Sbjct: 123 VDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIY-GFSL 181
Query: 164 PWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSK 223
V C DPCP+ VDCF+SRPTEKT+F IFM+ S++ + LN+ EL Y V F+ K
Sbjct: 182 SAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFY----VFFKGVK 237
Query: 224 RAQTQKNHPNHA 235
K+ P HA
Sbjct: 238 DRVKGKSDPYHA 249
>gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens]
Length = 515
Score = 205 bits (522), Expect = 3e-53
Identities = 109/266 (40%), Positives = 159/266 (59%), Gaps = 30/266 (11%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L + V+ HST IGK+W+T++FIFR+++L VAA++VW DEQ F+CNT QPGC+
Sbjct: 3 DWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPGCR 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRH--ETTRKFRRGEKRNDFKDIE 119
NVCYD FP+S IR W LQ+IFVS+P+L+ H Y E R+ + + R + +++E
Sbjct: 63 NVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEEVE 122
Query: 120 ---------------DIKKQKVR---IEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGY 161
++K+K+ + G+L TY IF R + E FM Y LY G+
Sbjct: 123 FEMPRDRRRLEQELCQLEKRKLNKAPLRGTLLCTYVIHIFTRSVVEVGFMIGQYLLY-GF 181
Query: 162 HLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRR 221
HL + KC PCPN++DCF+SRPTEKT+F +FM S + I + LN+ E+ +L F++
Sbjct: 182 HLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHL----GFKK 237
Query: 222 SKRA-----QTQKNHPNHALKESKQN 242
KR + +K H ++KQN
Sbjct: 238 IKRGLWGKYKLKKEHNEFHANKAKQN 263
>gi|32483412 connexin 40 [Homo sapiens]
Length = 358
Score = 198 bits (503), Expect = 5e-51
Identities = 98/228 (42%), Positives = 141/228 (61%), Gaps = 17/228 (7%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L F+ V+KHST +GKVW+TV+FIFR+++L AA+ WGDEQ DF C+T+QPGC+
Sbjct: 3 DWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQ 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAY-YRHETTRKFRRGEKRNDFKDIED 120
NVCYD FP+SHIR W LQ+IFVSTP+L+ H + R + RK R E+ + +
Sbjct: 63 NVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGS 122
Query: 121 IK---------------KQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPW 165
+ ++ ++G+L TY SI R E F+ YF+Y G L
Sbjct: 123 YEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY-GIFLTT 181
Query: 166 VLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYL 213
+ C PCP+ V+C++SRPTEK VF +FM++ + + +LL++AEL +L
Sbjct: 182 LHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHL 229
>gi|6631083 connexin 40 [Homo sapiens]
Length = 358
Score = 198 bits (503), Expect = 5e-51
Identities = 98/228 (42%), Positives = 141/228 (61%), Gaps = 17/228 (7%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L F+ V+KHST +GKVW+TV+FIFR+++L AA+ WGDEQ DF C+T+QPGC+
Sbjct: 3 DWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQ 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAY-YRHETTRKFRRGEKRNDFKDIED 120
NVCYD FP+SHIR W LQ+IFVSTP+L+ H + R + RK R E+ + +
Sbjct: 63 NVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGS 122
Query: 121 IK---------------KQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPW 165
+ ++ ++G+L TY SI R E F+ YF+Y G L
Sbjct: 123 YEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY-GIFLTT 181
Query: 166 VLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYL 213
+ C PCP+ V+C++SRPTEK VF +FM++ + + +LL++AEL +L
Sbjct: 182 LHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHL 229
>gi|14211941 gap junction protein, alpha 10 [Homo sapiens]
Length = 543
Score = 196 bits (498), Expect = 2e-50
Identities = 101/239 (42%), Positives = 142/239 (59%), Gaps = 21/239 (8%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
DW L + V+ HST +GK+W+T++FIFR+++L VAA++VW DEQ F CNT QPGC
Sbjct: 3 DWNLLGGILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQPGCN 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAY----YRHETTRK--FRRGEKRNDF 115
N+CYD FP+S IR W LQ+IFVS+P+L+ H Y + + RK R + N
Sbjct: 63 NICYDDAFPISLIRFWVLQIIFVSSPSLVYMGHALYRLRAFEKDRQRKKSHLRAQMENPD 122
Query: 116 KDIEDIKK--------------QKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGY 161
D+E+ ++ KV ++G L TY I R + E FM Y LY G+
Sbjct: 123 LDLEEQQRIDRELRRLEEQKRIHKVPLKGCLLRTYVLHILTRSVLEVGFMIGQYILY-GF 181
Query: 162 HLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFR 220
+ + KC PCPN VDCF+SRPTEKT+F +FM S + I +LLN+ E+ +L ++ R
Sbjct: 182 QMHPLYKCTQPPCPNAVDCFVSRPTEKTIFMLFMHSIAAISLLLNILEIFHLGIRKIMR 240
>gi|122939172 connexin 45 [Homo sapiens]
Length = 396
Score = 160 bits (405), Expect = 1e-39
Identities = 89/254 (35%), Positives = 135/254 (53%), Gaps = 42/254 (16%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M W L + ++ HST +GK+W+TV+ +FR+++ V + ++ DEQ FVCNT QPGC
Sbjct: 1 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALL---VAMH-VAYYRH-ETTRKFRRG------ 109
+NVCYD F P+SH+R W Q+I V+TP+++ A+H +A H E +K R
Sbjct: 61 ENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAMR 120
Query: 110 ----------EKRND-------FKDIEDIKKQKVRI-------------EGSLWWTYTSS 139
E+ N+ ++E K+ K + E L Y
Sbjct: 121 WKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQ 180
Query: 140 IFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISAS 199
+ R +FE F+ YFLY G+ + C PCP+ +DCFISRPTEKT+F + M +
Sbjct: 181 LLARTVFEVGFLIGQYFLY-GFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVT 239
Query: 200 VICMLLNVAELCYL 213
+C+LLN+ E+ +L
Sbjct: 240 GLCLLLNIWEMLHL 253
>gi|69122473 connexin 45 [Homo sapiens]
Length = 396
Score = 160 bits (405), Expect = 1e-39
Identities = 89/254 (35%), Positives = 135/254 (53%), Gaps = 42/254 (16%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M W L + ++ HST +GK+W+TV+ +FR+++ V + ++ DEQ FVCNT QPGC
Sbjct: 1 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGC 60
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALL---VAMH-VAYYRH-ETTRKFRRG------ 109
+NVCYD F P+SH+R W Q+I V+TP+++ A+H +A H E +K R
Sbjct: 61 ENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAMR 120
Query: 110 ----------EKRND-------FKDIEDIKKQKVRI-------------EGSLWWTYTSS 139
E+ N+ ++E K+ K + E L Y
Sbjct: 121 WKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQ 180
Query: 140 IFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISAS 199
+ R +FE F+ YFLY G+ + C PCP+ +DCFISRPTEKT+F + M +
Sbjct: 181 LLARTVFEVGFLIGQYFLY-GFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVT 239
Query: 200 VICMLLNVAELCYL 213
+C+LLN+ E+ +L
Sbjct: 240 GLCLLLNIWEMLHL 253
>gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens]
Length = 321
Score = 153 bits (386), Expect = 2e-37
Identities = 93/277 (33%), Positives = 134/277 (48%), Gaps = 69/277 (24%)
Query: 2 DWGTLHTFI-GGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
+W L + V +HST IG++ +TV+ IFR++I+ + + V+ DEQ FVCNTLQPGC
Sbjct: 3 EWTILERLLEAAVQQHSTMIGRILLTVVVIFRILIVAIVGETVYDDEQTMFVCNTLQPGC 62
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRR------------ 108
CYD FP+SHIR W Q+I V TP+L + Y H++ ++ R
Sbjct: 63 NQACYDRAFPISHIRYWVFQIIMVCTPSL---CFITYSVHQSAKQRERRYSTVFLALDRD 119
Query: 109 -----------------GEKRNDFK----------------------DIEDIK------- 122
G KR D K D ++K
Sbjct: 120 PPESIGGPGGTGGGGSGGGKREDKKLQNAIVNGVLQNTENTSKETEPDCLEVKELTPHPS 179
Query: 123 ------KQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPN 176
K K+R + + Y + FR E F+ YFLY G+ +P + +C PC
Sbjct: 180 GLRTASKSKLRRQEGISRFYIIQVVFRNALEIGFLVGQYFLY-GFSVPGLYECNRYPCIK 238
Query: 177 LVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYL 213
V+C++SRPTEKTVF +FM + S IC++LN+AEL +L
Sbjct: 239 EVECYVSRPTEKTVFLVFMFAVSGICVVLNLAELNHL 275
>gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]
Length = 294
Score = 147 bits (371), Expect = 9e-36
Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 10/242 (4%)
Query: 2 DWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCK 61
+W L + + V S +G++W+ V+ IFR+++L V+ DEQE+FVCNTLQPGC+
Sbjct: 3 EWAFLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCR 62
Query: 62 NVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRND-FKDIED 120
CYD FPVSH R W ++ +S P +L V Y H ++ E + +
Sbjct: 63 QTCYDRAFPVSHYRFWLFHILLLSAPPVL---FVVYSMHRAGKEAGGAEAAAQCAPGLPE 119
Query: 121 IKKQKVRIEG-SLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVD 179
+ + Y S+ R++ E F+ LY G+ + C PCP+ VD
Sbjct: 120 AQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLY-GFRVAPHFACAGPPCPHTVD 178
Query: 180 CFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNHPNHALKES 239
CF+SRPTEKTVF +F + ++ LL+VAEL +LL ++ RA + N N A +E+
Sbjct: 179 CFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHLL----WKGRPRAGERDNRCNRAHEEA 234
Query: 240 KQ 241
++
Sbjct: 235 QK 236
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 135 bits (339), Expect = 5e-32
Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 13/218 (5%)
Query: 13 VNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVS 72
+N + T +GK+W + + R++++V+A + V+ DEQE FVCNTLQPGC NVCYD F PVS
Sbjct: 14 LNCNVTMVGKLWFVLTMLLRMLVIVLAGRPVYQDEQERFVCNTLQPGCANVCYDVFSPVS 73
Query: 73 HIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKR-NDFKDIEDIKKQKVRIEGS 131
H+R W +Q + V P+ + +++V H G +R D ++ +++ R G
Sbjct: 74 HLRFWLIQGVCVLLPSAVFSVYVL---HRGATLAALGPRRCPDPREPASGQRRCPRPFGE 130
Query: 132 LWWT--------YTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFIS 183
Y + R + EAAF + YFL+ G+ P C PC +VDC++S
Sbjct: 131 RGGLQVPDFSAGYIIHLLLRTLLEAAFGALHYFLF-GFLAPKKFPCTRPPCTGVVDCYVS 189
Query: 184 RPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRR 221
RPTEK++ +F+ + S + LL +A+L L + RR
Sbjct: 190 RPTEKSLLMLFLWAVSALSFLLGLADLVCSLRRRMRRR 227
>gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]
Length = 279
Score = 127 bits (318), Expect = 1e-29
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 6 LHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCY 65
L + ++ ST +G++ + V+ FR+++L + V+GDEQ +FVC+T QPGCK C+
Sbjct: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
Query: 66 DHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDIKKQK 125
D F P+S +R W Q+I V+ P+ A+++ + + + K + + + ++
Sbjct: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
Query: 126 VRIEGS----LWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCF 181
+ G+ L W Y + + R++ E A + + Y LY G+ +P C +PC + C
Sbjct: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
Query: 182 ISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNH 231
+SRP+EKT+F M S C+L EL L L +R K + +
Sbjct: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKY 231
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 112 bits (280), Expect = 3e-25
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 1 MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGC 60
M W L + ++ HST +GKVW+TV+ +FR+++ V + ++ DEQ F CNT QPGC
Sbjct: 4 MSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQPGC 63
Query: 61 KNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKR 112
NVCYD F P+SH+R W Q++ +STP++ M++ Y H R + +R
Sbjct: 64 DNVCYDAFAPLSHVRFWVFQIVVISTPSV---MYLGYAVHRLARASEQERRR 112
Score = 77.8 bits (190), Expect = 9e-15
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 123 KQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFI 182
+++++ EG L Y + + R FE AF+ Y LY G+ + C PCP++VDCF+
Sbjct: 201 RRRIQREG-LMRVYVAQLVARAAFEVAFLVGQYLLY-GFEVRPFFPCSRQPCPHVVDCFV 258
Query: 183 SRPTEKTVFTIFMISASVICMLLNVAELCYL 213
SRPTEKTVF + M S +C+LLN+ E+ +L
Sbjct: 259 SRPTEKTVFLLVMYVVSCLCLLLNLCEMAHL 289
>gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
Query: 76 LWALQLIFVSTPALL 90
W Q+I V+ P++L
Sbjct: 95 FWVFQVILVAVPSVL 109
>gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
Query: 76 LWALQLIFVSTPALL 90
W Q+I V+ P++L
Sbjct: 95 FWVFQVILVAVPSVL 109
>gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
Query: 76 LWALQLIFVSTPALL 90
W Q+I V+ P++L
Sbjct: 95 FWVFQVILVAVPSVL 109
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,610,887
Number of Sequences: 37866
Number of extensions: 380165
Number of successful extensions: 1218
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1137
Number of HSP's gapped (non-prelim): 58
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.