GJC1 2657

Name: GJC1	Sequence: fasta or formatted (396aa)		NCBI GI: 122939172
Description: connexin 45		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [396aa] connexin 45
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 27 2 C cysteine 1.8 7 1 D aspartate 3.8 15 1 E glutamate 8.3 33 2 F phenylalanine 4.0 16 1 G glycine 5.8 23 2 H histidine 3.3 13 1 I isoleucine 5.8 23 2 K lysine 6.8 27 2 L leucine 8.6 34 3 M methionine 2.8 11 2 N asparagine 4.3 17 2 P proline 5.3 21 2 Q glutamine 4.8 19 2 R arginine 5.1 20 3 S serine 6.3 25 2 T threonine 4.5 18 1 V valine 5.3 21 1 W tryptophan 1.8 7 1 Y tyrosine 4.8 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 connexin 45 GJC1 1.000 connexin 45 GJC2 0.420 gap junction protein, gamma 2, 47kDa GJA3 0.277 connexin 46 GJA8 0.269 connexin 50 GJA10 0.269 gap junction protein, alpha 10 GJA5 0.251 connexin 40 GJA5 0.251 connexin 40 GJA4 0.250 connexin 37 GJA9 0.250 gap junction protein, alpha 9, 59kDa GJD2 0.244 gap junction protein, delta 2, 36kDa GJA1 0.242 connexin 43 GJC3 0.193 gap junction protein, gamma 3, 30.2kDa GJD3 0.187 gap junction protein, delta 3, 31.9kDa GJB2 0.184 gap junction protein beta 2 GJB1 0.184 gap junction protein, beta 1, 32kDa GJB1 0.184 gap junction protein, beta 1, 32kDa GJB6 0.170 gap junction protein, beta 6 GJB6 0.170 gap junction protein, beta 6 GJB6 0.170 gap junction protein, beta 6 GJB6 0.170 gap junction protein, beta 6 GJB7 0.167 gap junction protein, beta 7, 25kDa GJB4 0.164 gap junction protein, beta 4 GJB5 0.150 gap junction protein, beta 5, 31.1kDa GJD4 0.148 connexin40.1 GJB3 0.143 connexin 31 GJB3 0.143 connexin 31 LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.