GJB3 2998

Name: GJB3	Sequence: fasta or formatted (270aa)		NCBI GI: 13128960
Description: connexin 31		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [270aa] connexin 31
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 18 2 C cysteine 5.6 15 1 D aspartate 4.1 11 1 E glutamate 3.7 10 2 F phenylalanine 4.8 13 1 G glycine 5.6 15 2 H histidine 3.7 10 2 I isoleucine 5.6 15 2 K lysine 5.6 15 2 L leucine 11.1 30 2 M methionine 1.1 3 1 N asparagine 4.4 12 2 P proline 4.8 13 1 Q glutamine 3.0 8 1 R arginine 5.9 16 2 S serine 5.2 14 3 T threonine 4.4 12 1 V valine 8.1 22 2 W tryptophan 2.6 7 2 Y tyrosine 4.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 connexin 31 GJB3 1.000 connexin 31 GJB4 0.535 gap junction protein, beta 4 GJB5 0.518 gap junction protein, beta 5, 31.1kDa GJB2 0.427 gap junction protein beta 2 GJB7 0.422 gap junction protein, beta 7, 25kDa GJB6 0.418 gap junction protein, beta 6 GJB6 0.418 gap junction protein, beta 6 GJB6 0.418 gap junction protein, beta 6 GJB6 0.418 gap junction protein, beta 6 GJB1 0.407 gap junction protein, beta 1, 32kDa GJB1 0.407 gap junction protein, beta 1, 32kDa GJA4 0.316 connexin 37 GJA8 0.300 connexin 50 GJA1 0.298 connexin 43 GJA3 0.293 connexin 46 GJA10 0.280 gap junction protein, alpha 10 GJA9 0.269 gap junction protein, alpha 9, 59kDa GJA5 0.247 connexin 40 GJA5 0.247 connexin 40 GJC1 0.205 connexin 45 GJC1 0.205 connexin 45 GJD3 0.200 gap junction protein, delta 3, 31.9kDa GJD4 0.176 connexin40.1 GJC3 0.169 gap junction protein, gamma 3, 30.2kDa GJC2 0.149 gap junction protein, gamma 2, 47kDa GJD2 0.140 gap junction protein, delta 2, 36kDa LOC100128334 0.093 PREDICTED: similar to hCG1770601 LOC100128334 0.093 PREDICTED: similar to hCG1770601 LOC100128334 0.093 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.