GJA1 28719

Name: GJA1	Sequence: fasta or formatted (382aa)		NCBI GI: 4504001
Description: connexin 43		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 26 2 C cysteine 2.4 9 1 D aspartate 4.7 18 2 E glutamate 4.7 18 3 F phenylalanine 5.5 21 2 G glycine 6.0 23 2 H histidine 2.1 8 1 I isoleucine 5.8 22 2 K lysine 7.3 28 2 L leucine 8.9 34 3 M methionine 1.8 7 1 N asparagine 4.2 16 2 P proline 5.0 19 2 Q glutamine 4.7 18 2 R arginine 4.5 17 1 S serine 9.7 37 2 T threonine 3.4 13 1 V valine 6.8 26 2 W tryptophan 1.6 6 1 Y tyrosine 4.2 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 connexin 43 GJA4 0.369 connexin 37 GJA3 0.365 connexin 46 GJA8 0.325 connexin 50 GJA5 0.321 connexin 40 GJA5 0.321 connexin 40 GJA10 0.297 gap junction protein, alpha 10 GJA9 0.292 gap junction protein, alpha 9, 59kDa GJC1 0.255 connexin 45 GJC1 0.255 connexin 45 GJB1 0.242 gap junction protein, beta 1, 32kDa GJB1 0.242 gap junction protein, beta 1, 32kDa GJB2 0.242 gap junction protein beta 2 GJB6 0.240 gap junction protein, beta 6 GJB6 0.240 gap junction protein, beta 6 GJB6 0.240 gap junction protein, beta 6 GJB6 0.240 gap junction protein, beta 6 GJC2 0.234 gap junction protein, gamma 2, 47kDa GJB3 0.218 connexin 31 GJB3 0.218 connexin 31 GJB4 0.216 gap junction protein, beta 4 GJB7 0.211 gap junction protein, beta 7, 25kDa GJD2 0.211 gap junction protein, delta 2, 36kDa GJB5 0.207 gap junction protein, beta 5, 31.1kDa GJD3 0.194 gap junction protein, delta 3, 31.9kDa GJC3 0.147 gap junction protein, gamma 3, 30.2kDa GJD4 0.139 connexin40.1 LOC100128334 0.081 PREDICTED: similar to hCG1770601 LOC100128334 0.081 PREDICTED: similar to hCG1770601 LOC100128334 0.081 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.