GJB2 28023

Name: GJB2	Sequence: fasta or formatted (226aa)		NCBI GI: 42558283
Description: gap junction protein beta 2		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 11 2 C cysteine 4.0 9 1 D aspartate 3.1 7 1 E glutamate 4.9 11 2 F phenylalanine 7.1 16 2 G glycine 4.9 11 2 H histidine 2.2 5 1 I isoleucine 8.8 20 1 K lysine 7.5 17 2 L leucine 8.0 18 2 M methionine 3.1 7 1 N asparagine 2.7 6 1 P proline 3.1 7 1 Q glutamine 2.7 6 1 R arginine 4.4 10 2 S serine 5.8 13 2 T threonine 6.2 14 1 V valine 9.7 22 2 W tryptophan 3.1 7 2 Y tyrosine 4.0 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein beta 2 GJB6 0.798 gap junction protein, beta 6 GJB6 0.798 gap junction protein, beta 6 GJB6 0.798 gap junction protein, beta 6 GJB6 0.798 gap junction protein, beta 6 GJB1 0.666 gap junction protein, beta 1, 32kDa GJB1 0.666 gap junction protein, beta 1, 32kDa GJB3 0.527 connexin 31 GJB3 0.527 connexin 31 GJB4 0.516 gap junction protein, beta 4 GJB5 0.491 gap junction protein, beta 5, 31.1kDa GJA8 0.480 connexin 50 GJB7 0.471 gap junction protein, beta 7, 25kDa GJA3 0.457 connexin 46 GJA4 0.437 connexin 37 GJA10 0.422 gap junction protein, alpha 10 GJA9 0.422 gap junction protein, alpha 9, 59kDa GJA1 0.408 connexin 43 GJA5 0.397 connexin 40 GJA5 0.397 connexin 40 GJC1 0.327 connexin 45 GJC1 0.327 connexin 45 GJD3 0.278 gap junction protein, delta 3, 31.9kDa GJC3 0.240 gap junction protein, gamma 3, 30.2kDa GJD4 0.238 connexin40.1 GJC2 0.204 gap junction protein, gamma 2, 47kDa GJD2 0.184 gap junction protein, delta 2, 36kDa LOC100128334 0.132 PREDICTED: similar to hCG1770601 LOC100128334 0.132 PREDICTED: similar to hCG1770601 LOC100128334 0.132 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.