GJA5 34524

Name: GJA5	Sequence: fasta or formatted (358aa)		NCBI GI: 6631083
Description: connexin 40		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [358aa] connexin 40
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 18 2 C cysteine 3.1 11 1 D aspartate 2.8 10 2 E glutamate 5.9 21 2 F phenylalanine 5.0 18 2 G glycine 7.8 28 2 H histidine 3.4 12 1 I isoleucine 4.5 16 2 K lysine 4.5 16 2 L leucine 8.4 30 3 M methionine 2.5 9 1 N asparagine 3.9 14 2 P proline 5.6 20 3 Q glutamine 5.6 20 2 R arginine 6.1 22 2 S serine 7.5 27 2 T threonine 4.7 17 2 V valine 8.7 31 2 W tryptophan 1.7 6 1 Y tyrosine 3.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 connexin 40 GJA5 1.000 connexin 40 GJA8 0.400 connexin 50 GJA3 0.393 connexin 46 GJA4 0.350 connexin 37 GJA9 0.350 gap junction protein, alpha 9, 59kDa GJA10 0.337 gap junction protein, alpha 10 GJA1 0.337 connexin 43 GJC1 0.277 connexin 45 GJC1 0.277 connexin 45 GJB2 0.247 gap junction protein beta 2 GJD2 0.245 gap junction protein, delta 2, 36kDa GJC2 0.245 gap junction protein, gamma 2, 47kDa GJB6 0.241 gap junction protein, beta 6 GJB6 0.241 gap junction protein, beta 6 GJB6 0.241 gap junction protein, beta 6 GJB6 0.241 gap junction protein, beta 6 GJB1 0.230 gap junction protein, beta 1, 32kDa GJB1 0.230 gap junction protein, beta 1, 32kDa GJB4 0.221 gap junction protein, beta 4 GJD3 0.219 gap junction protein, delta 3, 31.9kDa GJB5 0.208 gap junction protein, beta 5, 31.1kDa GJB7 0.194 gap junction protein, beta 7, 25kDa GJB3 0.189 connexin 31 GJB3 0.189 connexin 31 GJD4 0.166 connexin40.1 GJC3 0.153 gap junction protein, gamma 3, 30.2kDa LOC100128334 0.086 PREDICTED: similar to hCG1770601 LOC100128334 0.086 PREDICTED: similar to hCG1770601 LOC100128334 0.086 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.