GJD3 4769

Name: GJD3	Sequence: fasta or formatted (294aa)		NCBI GI: 148839378
Description: gap junction protein, delta 3, 31.9kDa		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.3 39 3 C cysteine 4.4 13 1 D aspartate 2.0 6 1 E glutamate 5.4 16 2 F phenylalanine 5.1 15 1 G glycine 7.8 23 2 H histidine 2.7 8 1 I isoleucine 1.4 4 1 K lysine 1.7 5 1 L leucine 13.6 40 3 M methionine 1.0 3 1 N asparagine 1.0 3 1 P proline 11.2 33 10 Q glutamine 3.1 9 1 R arginine 8.5 25 2 S serine 4.4 13 1 T threonine 2.7 8 1 V valine 6.8 20 2 W tryptophan 1.4 4 1 Y tyrosine 2.4 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein, delta 3, 31.9kDa GJA3 0.311 connexin 46 GJA8 0.294 connexin 50 GJA4 0.276 connexin 37 GJA5 0.267 connexin 40 GJA5 0.267 connexin 40 GJA9 0.264 gap junction protein, alpha 9, 59kDa GJA10 0.259 gap junction protein, alpha 10 GJC1 0.252 connexin 45 GJC1 0.252 connexin 45 GJA1 0.248 connexin 43 GJB1 0.219 gap junction protein, beta 1, 32kDa GJB1 0.219 gap junction protein, beta 1, 32kDa GJD4 0.218 connexin40.1 GJB2 0.211 gap junction protein beta 2 GJB4 0.211 gap junction protein, beta 4 GJB6 0.207 gap junction protein, beta 6 GJB6 0.207 gap junction protein, beta 6 GJB6 0.207 gap junction protein, beta 6 GJB6 0.207 gap junction protein, beta 6 GJB7 0.190 gap junction protein, beta 7, 25kDa GJB3 0.187 connexin 31 GJB3 0.187 connexin 31 GJD2 0.179 gap junction protein, delta 2, 36kDa GJB5 0.177 gap junction protein, beta 5, 31.1kDa GJC3 0.177 gap junction protein, gamma 3, 30.2kDa GJC2 0.146 gap junction protein, gamma 2, 47kDa LOC100128334 0.105 PREDICTED: similar to hCG1770601 LOC100128334 0.105 PREDICTED: similar to hCG1770601 LOC100128334 0.105 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.