GJB5 214

Name: GJB5	Sequence: fasta or formatted (273aa)		NCBI GI: 10835079
Description: gap junction protein, beta 5, 31.1kDa		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 15 2 C cysteine 4.8 13 1 D aspartate 5.1 14 2 E glutamate 3.7 10 1 F phenylalanine 5.9 16 2 G glycine 4.8 13 2 H histidine 4.8 13 2 I isoleucine 5.1 14 1 K lysine 5.5 15 2 L leucine 11.7 32 2 M methionine 1.5 4 1 N asparagine 3.3 9 1 P proline 5.5 15 2 Q glutamine 1.8 5 1 R arginine 5.1 14 1 S serine 7.3 20 2 T threonine 4.0 11 2 V valine 9.2 25 2 W tryptophan 2.2 6 2 Y tyrosine 3.3 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein, beta 5, 31.1kDa GJB4 0.560 gap junction protein, beta 4 GJB3 0.516 connexin 31 GJB3 0.516 connexin 31 GJB7 0.446 gap junction protein, beta 7, 25kDa GJB1 0.415 gap junction protein, beta 1, 32kDa GJB1 0.415 gap junction protein, beta 1, 32kDa GJB6 0.413 gap junction protein, beta 6 GJB6 0.413 gap junction protein, beta 6 GJB6 0.413 gap junction protein, beta 6 GJB6 0.413 gap junction protein, beta 6 GJB2 0.397 gap junction protein beta 2 GJA8 0.313 connexin 50 GJA4 0.297 connexin 37 GJA3 0.288 connexin 46 GJA1 0.283 connexin 43 GJA10 0.275 gap junction protein, alpha 10 GJA9 0.274 gap junction protein, alpha 9, 59kDa GJA5 0.270 connexin 40 GJA5 0.270 connexin 40 GJC1 0.216 connexin 45 GJC1 0.216 connexin 45 GJD3 0.188 gap junction protein, delta 3, 31.9kDa GJD4 0.183 connexin40.1 GJC3 0.156 gap junction protein, gamma 3, 30.2kDa GJC2 0.149 gap junction protein, gamma 2, 47kDa GJD2 0.136 gap junction protein, delta 2, 36kDa LOC100128334 0.085 PREDICTED: similar to hCG1770601 LOC100128334 0.085 PREDICTED: similar to hCG1770601 LOC100128334 0.085 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.