GJB6 27370

Name: GJB6	Sequence: fasta or formatted (261aa)		NCBI GI: 40254837
Description: gap junction protein, beta 6		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [261aa] gap junction protein, beta 6 alt mRNA [261aa] gap junction protein, beta 6 alt mRNA [261aa] gap junction protein, beta 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 13 2 C cysteine 3.4 9 1 D aspartate 3.8 10 1 E glutamate 5.0 13 1 F phenylalanine 7.7 20 2 G glycine 4.6 12 2 H histidine 3.4 9 1 I isoleucine 8.0 21 2 K lysine 6.1 16 2 L leucine 8.0 21 3 M methionine 2.7 7 1 N asparagine 4.6 12 1 P proline 3.4 9 1 Q glutamine 3.4 9 1 R arginine 5.0 13 2 S serine 5.7 15 2 T threonine 5.7 15 2 V valine 8.0 21 2 W tryptophan 2.7 7 2 Y tyrosine 3.4 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein, beta 6 GJB6 1.000 gap junction protein, beta 6 GJB6 1.000 gap junction protein, beta 6 GJB6 1.000 gap junction protein, beta 6 GJB2 0.682 gap junction protein beta 2 GJB1 0.569 gap junction protein, beta 1, 32kDa GJB1 0.569 gap junction protein, beta 1, 32kDa GJB4 0.444 gap junction protein, beta 4 GJB3 0.441 connexin 31 GJB3 0.441 connexin 31 GJB5 0.437 gap junction protein, beta 5, 31.1kDa GJB7 0.398 gap junction protein, beta 7, 25kDa GJA8 0.391 connexin 50 GJA4 0.364 connexin 37 GJA3 0.362 connexin 46 GJA1 0.347 connexin 43 GJA9 0.345 gap junction protein, alpha 9, 59kDa GJA5 0.331 connexin 40 GJA5 0.331 connexin 40 GJA10 0.328 gap junction protein, alpha 10 GJC1 0.259 connexin 45 GJC1 0.259 connexin 45 GJD2 0.245 gap junction protein, delta 2, 36kDa GJD3 0.234 gap junction protein, delta 3, 31.9kDa GJD4 0.211 connexin40.1 GJC3 0.195 gap junction protein, gamma 3, 30.2kDa GJC2 0.167 gap junction protein, gamma 2, 47kDa LOC100128334 0.111 PREDICTED: similar to hCG1770601 LOC100128334 0.111 PREDICTED: similar to hCG1770601 LOC100128334 0.111 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.