Search of human proteins with 158631211

Search of human proteins with 158631211

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|158631211 transmembrane inner ear protein precursor [Homo
sapiens]
         (156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|158631211 transmembrane inner ear protein precursor [Homo sap...   321   1e-88
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          36   0.012
gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens]          36   0.015
gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]         35   0.034
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    33   0.075
gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]                33   0.075
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]            33   0.098
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa...    33   0.098
gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]           33   0.098
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     33   0.13 
gi|211059425 hypothetical protein LOC284422 [Homo sapiens]             33   0.13 
gi|4504031 GDP-mannose 4,6-dehydratase [Homo sapiens]                  32   0.17 
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap...    32   0.17 
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [...    32   0.22 
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H...    32   0.22 
gi|41152076 steroid-sensitive protein 1 [Homo sapiens]                 32   0.29 
gi|41152074 steroid-sensitive protein 1 [Homo sapiens]                 32   0.29 
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    31   0.37 
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...    31   0.37 
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa...    31   0.37 
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa...    31   0.37 
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...    31   0.37 
gi|117553584 adaptor-related protein complex 3, delta 1 subunit ...    31   0.49 
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ...    31   0.49 
gi|4502263 activating transcription factor 3 isoform 1 [Homo sap...    31   0.49 
gi|71902536 activating transcription factor 3 isoform 1 [Homo sa...    31   0.49 
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1...    31   0.49 
gi|27477111 step II splicing factor SLU7 [Homo sapiens]                31   0.49 
gi|27734775 hypothetical protein LOC286499 [Homo sapiens]              31   0.49 
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            30   0.64 

>gi|158631211 transmembrane inner ear protein precursor [Homo
           sapiens]
          Length = 156

 Score =  321 bits (823), Expect = 1e-88
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MAGWPGAGPLCVLGGAALGVCLAGVAGQLVEPSTAPPKPKPPPLTKETVVFWDMRLWHVV 60
           MAGWPGAGPLCVLGGAALGVCLAGVAGQLVEPSTAPPKPKPPPLTKETVVFWDMRLWHVV
Sbjct: 1   MAGWPGAGPLCVLGGAALGVCLAGVAGQLVEPSTAPPKPKPPPLTKETVVFWDMRLWHVV 60

Query: 61  GIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPG 120
           GIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPG
Sbjct: 61  GIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPG 120

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK
Sbjct: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 36.2 bits (82), Expect = 0.012
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 12/73 (16%)

Query: 88  EIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSV----DTVAIKVEE 143
           E +A  ++ KAAK  T K E        T+V  EDKK++K+K K  V    D   IK EE
Sbjct: 622 EKQATDVKPKAAKEKTVKKE--------TKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEE 673

Query: 144 DEKNEAKKKKGEK 156
             K E  KK+ +K
Sbjct: 674 KPKKEEVKKEVKK 686



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)

Query: 117 EVPGEDKKKKKK--KKKDSVDTVAIKVEEDEKNEAKKKKGE 155
           E+  E+KK+ KK  KK+     V  +V+++EK E KK++ E
Sbjct: 687 EIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKE 727



 Score = 26.9 bits (58), Expect = 7.0
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 86  RKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDE 145
           +KE++    + +  +   +  +  PP     EV  E+KK+ KK++K+    +  K+ +D 
Sbjct: 681 KKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIK-KLPKDA 739

Query: 146 K------NEAKK 151
           K      +EAKK
Sbjct: 740 KKSSTPLSEAKK 751


>gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens]
          Length = 1621

 Score = 35.8 bits (81), Expect = 0.015
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 87   KEIEARYLQRKAAKMYTDKLETVPP------LNELTEVPGEDKKKKKKKKKDSVDTVAIK 140
            K I+ +  + K  K+  +  ET+P       + E+T +  +  KK  KKKK  +DT A+K
Sbjct: 1209 KAIKGKVGKPKVKKLQLE--ETMPSPYGRRIIPEITAMKADASKKLLKKKKGDLDTAAVK 1266

Query: 141  VEEDEK 146
            VE DE+
Sbjct: 1267 VEFDEE 1272


>gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]
          Length = 953

 Score = 34.7 bits (78), Expect = 0.034
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 10/118 (8%)

Query: 43  PLTKETVVFWDMRLWHVVGIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMY 102
           P     +VF     W  +  F    LS+  T  CV          +++ +   + +   Y
Sbjct: 758 PSVVGVLVFTQFWFWFPLSHF----LSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAY 813

Query: 103 TDKLETVPPLNELTEVPGE-----DKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGE 155
              LE VP   E  +V         K KKK+K+K+  +   ++V+E EK E K+KK E
Sbjct: 814 PAPLE-VPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 123

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 95  QRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKK------KKKDSVDTVAIKVEEDEKNE 148
           ++K  K  T++ E      E  E  G+ K+K+K+      KKK + +T   K +E+E+ +
Sbjct: 2   KKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61

Query: 149 AKKKKGEK 156
            K+K+ +K
Sbjct: 62  RKRKRKKK 69



 Score = 32.7 bits (73), Expect = 0.13
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 86  RKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDE 145
           RKE      + K  K  T + E      E  E   + K+K+KKKK++       + EE+E
Sbjct: 29  RKEKRKEKRKEKEKKKKTKETEK---RKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEE 85

Query: 146 KNEAKKKKGEK 156
           K E +K++G +
Sbjct: 86  KEEEEKEEGRR 96



 Score = 32.0 bits (71), Expect = 0.22
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKK+        + EE+E+ E K+K+  K
Sbjct: 1   KKKKKKKKETEETEETEETEEEEEKEGKRKEKRK 34



 Score = 29.3 bits (64), Expect = 1.4
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%)

Query: 84  RTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDK----KKKKKKKKDSVDTVAI 139
           R  KE E +  +RK  K   ++        E  E   E+K    ++KKKKK+        
Sbjct: 52  RKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRR------ 105

Query: 140 KVEEDEKNEAKKKKGEK 156
           K EE+EK + +++K +K
Sbjct: 106 KEEEEEKKKKRRRKTKK 122


>gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]
          Length = 300

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 8/63 (12%)

Query: 87  KEIEARYLQRKAA--KMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEED 144
           K+ E R  QR+    K+YTD+L      NE  ++  EDK K +++K+  +  + +K +E 
Sbjct: 207 KDTEERLKQREEVLRKIYTDQL------NEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEK 260

Query: 145 EKN 147
            KN
Sbjct: 261 IKN 263


>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 33.1 bits (74), Expect = 0.098
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)

Query: 106 LETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           L  +P   E  E   E KKKKKKKKK        K ++ +K + KKKK +K
Sbjct: 96  LHGLPQREEKKEKEKEKKKKKKKKKKKK------KKKKKKKKKKKKKKKKK 140



 Score = 30.4 bits (67), Expect = 0.64
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 111 PLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           P  E  +   ++KKKKKKKKK        K ++ +K + KK+K ++
Sbjct: 100 PQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKR 145



 Score = 29.6 bits (65), Expect = 1.1
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 112 LNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           L +  E   ++K+KKKKKKK        K ++ +K + KKKK ++
Sbjct: 99  LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKR 143



 Score = 28.5 bits (62), Expect = 2.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K +   K + KKK+ +K
Sbjct: 125 KKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158



 Score = 28.1 bits (61), Expect = 3.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K ++ +K + K+K+  K
Sbjct: 115 KKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRK 148



 Score = 28.1 bits (61), Expect = 3.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K ++ +K + K+K+  K
Sbjct: 117 KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRK 150



 Score = 28.1 bits (61), Expect = 3.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K +   K + K+KK  K
Sbjct: 123 KKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRK 156



 Score = 28.1 bits (61), Expect = 3.2
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K +   K + K+KK +K
Sbjct: 127 KKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160



 Score = 27.7 bits (60), Expect = 4.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K ++  K + K+K+  K
Sbjct: 119 KKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRK 152



 Score = 27.7 bits (60), Expect = 4.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K +   K + K+K+ +K
Sbjct: 121 KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKK 153
           KKKKKKKKK        K +  +K + KKKK
Sbjct: 131 KKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161



 Score = 26.6 bits (57), Expect = 9.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        K ++ ++   +K+K +K
Sbjct: 120 KKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153



 Score = 26.6 bits (57), Expect = 9.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 123 KKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           KKKKKKKKK        +  + ++ + +KKK +K
Sbjct: 128 KKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161


>gi|84043963 eukaryotic translation initiation factor 5B [Homo
           sapiens]
          Length = 1220

 Score = 33.1 bits (74), Expect = 0.098
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 87  KEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKK-KKKKKDSVDTVAIKVEEDE 145
           KE+E   L+ +  K   + +   P  N   E   +DKKKK +K KK S D    +  ED+
Sbjct: 60  KELEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDK 119

Query: 146 KNEAKK 151
            +++KK
Sbjct: 120 DSKSKK 125



 Score = 31.6 bits (70), Expect = 0.29
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 86  RKEIEARYLQRKAAKMYTDKLETVPPLNELTEVP--GEDKKKKKKKKKDSVDTVAIKVEE 143
           +KE + ++ +       T     +P   E  E P   ED  +  KKKKD       K  E
Sbjct: 269 QKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKK----KKGE 324

Query: 144 DEKNEAKKKKG 154
            E+ E +KKKG
Sbjct: 325 KEEKEKEKKKG 335



 Score = 27.7 bits (60), Expect = 4.1
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 25/96 (26%)

Query: 86  RKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEED- 144
           +K+ E +  +RK       KL  +    EL     +  K+K+ ++K   +TV  KV  D 
Sbjct: 230 QKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDT 289

Query: 145 ------------------------EKNEAKKKKGEK 156
                                   +K + KKKKGEK
Sbjct: 290 GVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEK 325


>gi|169234949 CWF19-like 2, cell cycle control [Homo sapiens]
          Length = 894

 Score = 33.1 bits (74), Expect = 0.098
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 109 VPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           +P +NE  E   ++   KKKKKKD       K ++++K ++KK+K EK
Sbjct: 60  LPDVNERIEQFSQEHSVKKKKKKDKHSK---KAKKEKKKKSKKQKYEK 104


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 32.7 bits (73), Expect = 0.13
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 81  RVPRTRKEIEARYLQRKAAKMYTDKLETVP--PLNELTEVPGE--DKKKKKKKKKDSVDT 136
           +VP   KE  A+   ++ AK   +K E     P +   + P +  +KK+   +KKD+ + 
Sbjct: 902 KVPTPEKEAPAKVEVKEDAKP-KEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEE 960

Query: 137 VAIKVEEDEKNEAKKKKGEK 156
            A K EE  K EAK K+ +K
Sbjct: 961 KAKKPEEKPKTEAKAKEDDK 980


>gi|211059425 hypothetical protein LOC284422 [Homo sapiens]
          Length = 130

 Score = 32.7 bits (73), Expect = 0.13
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 52  WDMRLWHVVG-IFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETVP 110
           W + L  VVG +F ++++ +   L C       + R E E     R  + +Y D+ E   
Sbjct: 31  WLVGLAAVVGFLFIVYLVLLANRLWC------SKARAEDEEETTFRMESNLYQDQSEDKR 84

Query: 111 PLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKK 153
              E  E   E +KK+KK  K+    + + +EE E  + ++ K
Sbjct: 85  EKKEAKEKE-EKRKKEKKTAKEGESNLGLDLEEKEPGDHERAK 126


>gi|4504031 GDP-mannose 4,6-dehydratase [Homo sapiens]
          Length = 372

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 22  LAGVAGQLVEPSTAPPKPKPPPLTKETVVFWDMRLWHVVGIFSLFVLSIIITLCCVFNCR 81
           L G   ++ +  T P  P+ P    +   +W +  +     ++LF ++ I+     FN  
Sbjct: 158 LYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA--YNLFAVNGIL-----FNHE 210

Query: 82  VPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKV 141
            PR       R + R  AK+Y  +LE          +   D K+     KD V+ + + +
Sbjct: 211 SPRRGANFVTRKISRSVAKIYLGQLECF-------SLGNLDAKRDWGHAKDYVEAMWLML 263

Query: 142 EEDEKNEAKKKKGE 155
           + DE  +     GE
Sbjct: 264 QNDEPEDFVIATGE 277


>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
           sapiens]
          Length = 373

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 12/70 (17%)

Query: 84  RTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEE 143
           +  KE+E  YLQ KA + Y + L+      +      E KKK+K+K+K        + E 
Sbjct: 218 KAAKELEKEYLQEKAKEKYQEWLK------KKNAEECERKKKEKEKEKQQ------QAEI 265

Query: 144 DEKNEAKKKK 153
            EK E  +KK
Sbjct: 266 QEKKEIAEKK 275


>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
           [Homo sapiens]
          Length = 759

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           E+KKKKKK+KK   D       + EK + KK K +K
Sbjct: 172 EEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKK 207



 Score = 31.2 bits (69), Expect = 0.37
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 6/38 (15%)

Query: 119 PGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           P E KKKKK+KK  S D      + + KN+ +KKK +K
Sbjct: 171 PEEKKKKKKEKKSKSDD------KNENKNDPEKKKKKK 202



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           ++ ++KKKKKK+       K E     E KKKK +K
Sbjct: 169 QEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDK 204



 Score = 26.6 bits (57), Expect = 9.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 113 NELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEK 146
           NE    P + KKKK K+KK   +    K EE++K
Sbjct: 189 NENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKK 222


>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
           sapiens]
          Length = 690

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           E+KKKKKK+KK   D       + EK + KK K +K
Sbjct: 103 EEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKK 138



 Score = 31.2 bits (69), Expect = 0.37
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 6/38 (15%)

Query: 119 PGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           P E KKKKK+KK  S D      + + KN+ +KKK +K
Sbjct: 102 PEEKKKKKKEKKSKSDD------KNENKNDPEKKKKKK 133



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           ++ ++KKKKKK+       K E     E KKKK +K
Sbjct: 100 QEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDK 135



 Score = 26.6 bits (57), Expect = 9.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 113 NELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEK 146
           NE    P + KKKK K+KK   +    K EE++K
Sbjct: 120 NENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKK 153


>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 17/86 (19%)

Query: 88  EIEARY-LQRKAAKMYTDKLETVP-PLNELTE------VPGEDKKKKKKKKKDSVDTV-- 137
           E E +Y L R  A    D+L+    PL +  E      +   +K+KKKK K ++ D +  
Sbjct: 505 EYEEKYDLSRPTASQLEDELQVGNVPLKKAKESKKHEKLEKPEKEKKKKMKNENADKLLK 564

Query: 138 -------AIKVEEDEKNEAKKKKGEK 156
                  + K  + EK ++KKKKG K
Sbjct: 565 SEKQMKKSEKKSKQEKEKSKKKKGGK 590


>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 17/86 (19%)

Query: 88  EIEARY-LQRKAAKMYTDKLETVP-PLNELTE------VPGEDKKKKKKKKKDSVDTV-- 137
           E E +Y L R  A    D+L+    PL +  E      +   +K+KKKK K ++ D +  
Sbjct: 505 EYEEKYDLSRPTASQLEDELQVGNVPLKKAKESKKHEKLEKPEKEKKKKMKNENADKLLK 564

Query: 138 -------AIKVEEDEKNEAKKKKGEK 156
                  + K  + EK ++KKKKG K
Sbjct: 565 SEKQMKKSEKKSKQEKEKSKKKKGGK 590


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 117 EVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           + P ++KKKKKKK K+  +  A K  + +K++ K++  E+
Sbjct: 648 KTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEE 687


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
            sapiens]
          Length = 1690

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 95   QRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKK 151
            ++K  K+  DK +    LN+L +   +++++KKKK+K +   V +  E  EK   KK
Sbjct: 1534 RKKKLKLGADKSKE---LNKLAKKLAKEEERKKKKEKAAAAKVELVKESTEKKREKK 1587


>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
            sapiens]
          Length = 1641

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 95   QRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKK 151
            ++K  K+  DK +    LN+L +   +++++KKKK+K +   V +  E  EK   KK
Sbjct: 1539 RKKKLKLGADKSKE---LNKLAKKLAKEEERKKKKEKAAAAKVELVKESTEKKREKK 1592


>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
           sapiens]
          Length = 1954

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 83  PRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGED---KKKKKKKKKDSVDTVAI 139
           P+  KE + +  ++K      +  E    L E +E  G D    KKKKKK KD  +  A 
Sbjct: 53  PKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAK 112

Query: 140 KVEEDEKNE 148
           + ++DE  +
Sbjct: 113 RKKKDEDED 121



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 22  LAGVAGQLVEPSTAPPKPKPPPLTKETVVFW-DMRLWH 58
           + G+ G  VEPS  PPKP      +E  V W  +  WH
Sbjct: 485 MVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAGLSYWH 522


>gi|38569493 potassium voltage-gated channel, subfamily H
           (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 9   PLCVLGGAALGVCLAGVAGQLVEPSTAPPKPKPPPL 44
           PLCV  GA+   CL   AG ++  +   P+P PPPL
Sbjct: 937 PLCVDTGAS-SYCLQPPAGSVLSGTWPHPRPGPPPL 971


>gi|117553584 adaptor-related protein complex 3, delta 1 subunit
           isoform 1 [Homo sapiens]
          Length = 1112

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 6/40 (15%)

Query: 117 EVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           +VP  +KK KK KKK+       K +E E+++ KKK+ EK
Sbjct: 742 DVPMVEKKSKKPKKKEK------KHKEKERDKEKKKEKEK 775



 Score = 26.6 bits (57), Expect = 9.2
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 111 PLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGE 155
           P  ++  V  + KK KKK+KK        K  + EK + K+KK E
Sbjct: 739 PEKDVPMVEKKSKKPKKKEKKHKE-----KERDKEKKKEKEKKAE 778


>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
           isoform 2 [Homo sapiens]
          Length = 1153

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 6/40 (15%)

Query: 117 EVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           +VP  +KK KK KKK+       K +E E+++ KKK+ EK
Sbjct: 833 DVPMVEKKSKKPKKKEK------KHKEKERDKEKKKEKEK 866



 Score = 26.9 bits (58), Expect = 7.0
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 5/48 (10%)

Query: 109 VPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           VP + + ++ P + +KK K+K++D       K +E EK ++ K K +K
Sbjct: 834 VPMVEKKSKKPKKKEKKHKEKERDKE-----KKKEKEKKKSPKPKKKK 876


>gi|4502263 activating transcription factor 3 isoform 1 [Homo
           sapiens]
          Length = 181

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 11/38 (28%), Positives = 25/38 (65%)

Query: 119 PGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           P ED++KK++++++ +     + ++ EK E  +K+ EK
Sbjct: 83  PEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK 120


>gi|71902536 activating transcription factor 3 isoform 1 [Homo
           sapiens]
          Length = 181

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 11/38 (28%), Positives = 25/38 (65%)

Query: 119 PGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           P ED++KK++++++ +     + ++ EK E  +K+ EK
Sbjct: 83  PEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEK 120


>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
           [Homo sapiens]
          Length = 651

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 85  TRKEIEARYLQRKAAK----MYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIK 140
           +  E+E++  Q+   K      TD  ++V    E T+   E K   KK KKD        
Sbjct: 409 SESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDS 468

Query: 141 VEEDEKNEAKK 151
            ++D+K +AKK
Sbjct: 469 KKDDKKKDAKK 479



 Score = 28.1 bits (61), Expect = 3.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           +DKKK  KK  +S +  +    + +K  +K+KKG K
Sbjct: 471 DDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSK 506


>gi|27477111 step II splicing factor SLU7 [Homo sapiens]
          Length = 586

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 121 EDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKK 152
           E+KKKKKKKKK    + +   +E++K+E  KK
Sbjct: 496 EEKKKKKKKKKKHRKSSSDSDDEEKKHEKLKK 527



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 112 LNELTEVPGEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKK 153
           L EL +   +++KKKKKKKK      +   +++EK   K KK
Sbjct: 486 LMELHQEKLKEEKKKKKKKKKKHRKSSSDSDDEEKKHEKLKK 527


>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
          Length = 248

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 85  TRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEED 144
           T KE + R L +K  K Y D        +  ++   ED + KKK++ +  +    KV++ 
Sbjct: 167 TEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYE-EDVQAKKKRRCEEREQAKEKVKKK 225

Query: 145 EKNEAKKKKGEK 156
           +K + KK   +K
Sbjct: 226 KKKQHKKHSKKK 237



 Score = 26.9 bits (58), Expect = 7.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 120 GEDKKKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK 156
           G+ +KKKK +   S  +   + E + K   KKKK  K
Sbjct: 128 GKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSK 164


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 18/73 (24%), Positives = 35/73 (47%)

Query: 84  RTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIKVEE 143
           R ++    R  + K  +   ++ E      E     GE+K+K+KKK+K      + + +E
Sbjct: 73  REKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKE 132

Query: 144 DEKNEAKKKKGEK 156
            E+ E +K++  K
Sbjct: 133 RERKEERKREERK 145



 Score = 27.7 bits (60), Expect = 4.1
 Identities = 17/76 (22%), Positives = 34/76 (44%)

Query: 81  RVPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDKKKKKKKKKDSVDTVAIK 140
           R  R RK+ E    + +  +   ++ +      E  E   +++KK+++ +K+       K
Sbjct: 144 RKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERK 203

Query: 141 VEEDEKNEAKKKKGEK 156
              + K E KKK+  K
Sbjct: 204 ERRERKKERKKKEERK 219


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,335,626
Number of Sequences: 37866
Number of extensions: 375764
Number of successful extensions: 5664
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 4599
Number of HSP's gapped (non-prelim): 906
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.