Search of human proteins with 158534055

Search of human proteins with 158534055

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|158534055 round spermatid basic protein 1-like [Homo
sapiens]
         (846 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|158534055 round spermatid basic protein 1-like [Homo sapiens]     1702   0.0  
gi|38683851 round spermatid basic protein 1 [Homo sapiens]            700   0.0  
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]            61   4e-09
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            60   1e-08
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ...    59   1e-08
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [...    59   1e-08
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho...    56   2e-07
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    55   3e-07
gi|125656165 THO complex 2 [Homo sapiens]                              54   6e-07
gi|34878777 ring finger protein 20 [Homo sapiens]                      53   1e-06
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap...    52   2e-06
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap...    52   2e-06
gi|221219020 NYD-SP11 protein [Homo sapiens]                           52   3e-06
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          50   9e-06
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             50   9e-06
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                49   1e-05
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    49   1e-05
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]                49   2e-05
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]    49   2e-05
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]    49   2e-05
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ...    49   3e-05
gi|48255931 hepatoma-derived growth factor-related protein 2 iso...    49   3e-05
gi|14249158 hepatoma-derived growth factor-related protein 2 iso...    49   3e-05
gi|27734775 hypothetical protein LOC286499 [Homo sapiens]              48   3e-05
gi|20070107 orthodenticle homeobox 1 [Homo sapiens]                    47   7e-05
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]            47   1e-04
gi|4505101 microtubule-associated protein 7 [Homo sapiens]             46   1e-04
gi|56090620 NFKB activating protein-like [Homo sapiens]                46   2e-04
gi|109809739 La ribonucleoprotein domain family, member 7 [Homo ...    45   2e-04
gi|109809741 La ribonucleoprotein domain family, member 7 [Homo ...    45   2e-04

>gi|158534055 round spermatid basic protein 1-like [Homo sapiens]
          Length = 846

 Score = 1702 bits (4409), Expect = 0.0
 Identities = 846/846 (100%), Positives = 846/846 (100%)

Query: 1   MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG 60
           MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG
Sbjct: 1   MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG 60

Query: 61  GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL 120
           GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL
Sbjct: 61  GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL 120

Query: 121 SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG 180
           SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG
Sbjct: 121 SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG 180

Query: 181 GASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKP 240
           GASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKP
Sbjct: 181 GASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKP 240

Query: 241 KTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNI 300
           KTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNI
Sbjct: 241 KTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNI 300

Query: 301 KDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGAS 360
           KDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGAS
Sbjct: 301 KDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGAS 360

Query: 361 VIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSF 420
           VIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSF
Sbjct: 361 VIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFYVMGIVHGAATYLPDFLDYFSF 420

Query: 421 NFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYF 480
           NFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYF
Sbjct: 421 NFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYRAGPMRQISLVGAVDEEVGDYF 480

Query: 481 PEFLDMLEESPFLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKR 540
           PEFLDMLEESPFLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKR
Sbjct: 481 PEFLDMLEESPFLKCTLPWGTLSSLKLQSRKDSDDGPIMWVRPGEQMIPVADMPKSPFKR 540

Query: 541 KRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPD 600
           KRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPD
Sbjct: 541 KRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHIGQGFERQTTAAVGVLKAVHCGEWPD 600

Query: 601 QPRITKDVICFHAEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLY 660
           QPRITKDVICFHAEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLY
Sbjct: 601 QPRITKDVICFHAEDFLEVVQRMQLDLHEPPLSQCVQWVDDAKLNQLRREGIRYARIQLY 660

Query: 661 DNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLG 720
           DNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLG
Sbjct: 661 DNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDTSQNTATHETGTSSDSTSSVLG 720

Query: 721 PHTDNMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNN 780
           PHTDNMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNN
Sbjct: 721 PHTDNMICAVSKASLDSVFSDKLHSKYELQQIKHEPIASVRIKEEPVNVNIPEKTTALNN 780

Query: 781 MDGKNVKAKLDHVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKK 840
           MDGKNVKAKLDHVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKK
Sbjct: 781 MDGKNVKAKLDHVQFAEFKIDMDSKFENSNKDLKEELCPGNLSLVDTRQHSSAHSNQDKK 840

Query: 841 DDDILC 846
           DDDILC
Sbjct: 841 DDDILC 846


>gi|38683851 round spermatid basic protein 1 [Homo sapiens]
          Length = 802

 Score =  700 bits (1806), Expect = 0.0
 Identities = 375/667 (56%), Positives = 455/667 (68%), Gaps = 57/667 (8%)

Query: 64  GNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASLSQP 123
           G  RQ +  +  S +  G P+     PL+    P   R       G   P++A+ ++  P
Sbjct: 84  GVKRQRRSSSGGSQEKRGRPSQEP--PLA----PPHRRRRSRQHPGPLPPTNAAPTVPGP 137

Query: 124 VPRKLLVPPTLLHAQPHHLLLPAAAAAASANA---------KSRRPKEKREKERRRHGLG 174
           V   LL PP      P    + A   A S +A          +  PK K  KER +H   
Sbjct: 138 VEPLLLPPPPPPSLAPAGPAVAAPLPAPSTSALFTFSPLTVSAAGPKHKGHKERHKHH-- 195

Query: 175 GAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLK 234
                    R  +G+      D     +K +DK++  E+             G V ++  
Sbjct: 196 -------HHRGPDGDPSSCGTD-----LKHKDKQENGER------------TGGVPLIKA 231

Query: 235 SGKEKPKTN-----IEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVED 289
             +E P  N      +D  +KK+KKKKKKKH+E+ + +R KMY+K +QT+C+GL    ++
Sbjct: 232 PKRETPDENGKTQRADDFVLKKIKKKKKKKHREDMRGRRLKMYNKEVQTVCAGLTRISKE 291

Query: 290 QAAKGILNDN----------IKDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKR 339
              +G +N            +KD     L+    + ++P+  + PF++ +E  ++ N  +
Sbjct: 292 ILTQGQINSTSGLNKESFRYLKDEQLCRLNLGMQEYRVPQGVQTPFMTHQEHSIRRNFLK 351

Query: 340 LDTLEFKQLIHIEHQPNGGASVIHAYSNELSHLSPMEMERFAEEFVGLVFSENENSAAFY 399
             T +F   IH EHQ NGGA V+HAY +ELS LSPMEMERF+EEF+ L FSENE +AA+Y
Sbjct: 352 TGT-KFSNFIHEEHQSNGGALVLHAYMDELSFLSPMEMERFSEEFLALTFSENEKNAAYY 410

Query: 400 VMGIVHGAATYLPDFLDYFSFNFPNSPVKMEILGKKDIETTTMSNFHAQVKRTYSHGTYR 459
            + IVHGAA YLPDFLDYF+FNFPN+PVKMEILGKKDIETTT+SNFH QV RTY  GTYR
Sbjct: 411 ALAIVHGAAAYLPDFLDYFAFNFPNTPVKMEILGKKDIETTTISNFHTQVNRTYCCGTYR 470

Query: 460 AGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLKCTLPWGTLSSLKLQSRKDSDDGPIM 519
           AGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLK TLPWGTLSSL+LQ R  SDDGPIM
Sbjct: 471 AGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLKMTLPWGTLSSLRLQCRSQSDDGPIM 530

Query: 520 WVRPGEQMIPVADMPKSPFKRKRTTNEIKNLQYLPRTSEPREMLFEDRTRAHADHIGQGF 579
           WVRPGEQMIP ADMPKSPFKR+R+ NEIKNLQYLPRTSEPRE+LFEDRTRAHADH+GQGF
Sbjct: 531 WVRPGEQMIPTADMPKSPFKRRRSMNEIKNLQYLPRTSEPREVLFEDRTRAHADHVGQGF 590

Query: 580 ERQTTAAVGVLKAVHCGEWPDQPRITKDVICFHAEDFLEVVQRMQLDLHEPPLSQCVQWV 639
           + Q+TAAVGVLKAV  GEW DQPRITKDVICFHAEDF +VVQR+QLDLHEPP+SQCVQWV
Sbjct: 591 DWQSTAAVGVLKAVQFGEWSDQPRITKDVICFHAEDFTDVVQRLQLDLHEPPVSQCVQWV 650

Query: 640 DDAKLNQLRREGIRYARIQLYDNDIYFIPRNVVHQFKTVSAVCSLAWHIRLKLYHSEEDT 699
           D+AKLNQ+RREGIRYARIQL DNDIYFIPRNV+HQFKTVSAVCSLAWHIRLK YH   + 
Sbjct: 651 DEAKLNQMRREGIRYARIQLCDNDIYFIPRNVIHQFKTVSAVCSLAWHIRLKQYHPVVEA 710

Query: 700 SQNTATH 706
           +QNT ++
Sbjct: 711 TQNTESN 717


>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 275

 Score = 61.2 bits (147), Expect = 4e-09
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 141 HLLLPAAAAAASANAKSR-RPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIK 199
           H+  P     +    + R R K KRE+E+ R    G +E     + E G+ +   R + +
Sbjct: 24  HISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKERE 83

Query: 200 DKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKK 259
            + KER +++ R++KK K   E K+     +   K  KE+ + N +  + K+ K++KKK+
Sbjct: 84  KQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKR 143

Query: 260 HKENEKRK 267
            KE ++ K
Sbjct: 144 RKERKREK 151



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 156 KSRRPKEKREKERR-RHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKK 214
           + ++ KE+REKERR R      RE     R E  + K     + ++K +   K K+R KK
Sbjct: 82  REKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKK 141

Query: 215 KHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPK 270
           K +   + +KE G+ +   K  K++ +    +   K+ KK++++K +   K++R K
Sbjct: 142 KRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKK 197



 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 31/136 (22%), Positives = 67/136 (49%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K RR ++K +K+R R   G         R+E        R++ + K +++ + KER+++K
Sbjct: 92  KERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            +   E K++  + +   K  +   K   ++ + K+ +++KK++ KE  K+K  K   K+
Sbjct: 152 ERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKT 211

Query: 276 IQTICSGLLTDVEDQA 291
            +   S +   + + A
Sbjct: 212 DRQTDSQVFRPLRESA 227


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 7/122 (5%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           +S R KE+RE+E+R+      R+     +E+ GE K   R++ K + ++ +KE E ++K+
Sbjct: 56  ESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKR 115

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKK-KHKENEKRKRPKMYSK 274
            K   + KKE G      K GKE+ +      + +K +++KK+ + KE E+++R K   K
Sbjct: 116 KK---KEKKERGRTS---KEGKERERKEERKREERKERERKKEEREKERERKERKKRERK 169

Query: 275 SI 276
            +
Sbjct: 170 QV 171



 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 7/119 (5%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           +  R K KRE+E+ R    G +E  G  ++E  E K   R+K   + +E++K K++EKK+
Sbjct: 63  RREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKE 122

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSK 274
               ++  KE        +  +E+ +   ++ + KK +++K+++ KE +KR+R ++  K
Sbjct: 123 RGRTSKEGKER-------ERKEERKREERKERERKKEEREKERERKERKKRERKQVGEK 174



 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 3/124 (2%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K    KEKR+K+ ++    G     G  RE   E K   R + + K +ER+KE+ER+++K
Sbjct: 107 KEGEEKEKRKKKEKKER--GRTSKEGKERERKEERKREERKERERKKEEREKERERKERK 164

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKR-KRPKMYSK 274
            +   ++ ++  E K   +  ++K + N ++ + ++ +K+++++ KE +K+ +R K   K
Sbjct: 165 KRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQK 224

Query: 275 SIQT 278
             QT
Sbjct: 225 DRQT 228



 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 5/116 (4%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K  R KE+RE+++RR      +E     + +  E K   R   + K +ER +E++RE++K
Sbjct: 87  KGERKKEERERKKRRREKEN-KEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERK 145

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNI-EDLQIKKVKKKKKKKHKENEKRKRPK 270
            +   E KKE  E +   K  K++ +  + E  + +K K++K++K +E  +++R K
Sbjct: 146 ER---ERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKK 198



 Score = 50.4 bits (119), Expect = 7e-06
 Identities = 30/116 (25%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 156 KSRRPKEKRE-KERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKK 214
           K RR KE +E +E+ +      +E G  S+E  G+ +    ++ +++ KER+++KE  +K
Sbjct: 99  KRRREKENKEGEEKEKRKKKEKKERGRTSKE--GKERERKEERKREERKERERKKEEREK 156

Query: 215 KHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPK 270
           + +     K+E  +V    +  KEK +   +  +  + ++KK+++ KE  +RK+ +
Sbjct: 157 ERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKER 212



 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           + ++ +E   K+ RR      RE     + E G+         K+K  ER KE ERE+KK
Sbjct: 50  EGKKERESERKKERREREKRKREREKERKRERGK---------KEKKGERKKE-ERERKK 99

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPK 270
            +   E K+   + K   K  KE+ +T+ E  + ++ +++K+++ KE E++K  +
Sbjct: 100 RRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEER 154



 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 16/123 (13%)

Query: 152 SANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKER 211
           S   K R  KE+R++E R+      RE     RE+  E K   + + K   ++ ++ KE+
Sbjct: 127 SKEGKERERKEERKREERKE-----RERKKEEREKERERKERKKRERKQVGEKEEERKEK 181

Query: 212 EKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKM 271
           E+K+ K     +KE           ++K +   E  + KK +KKK+++ KE +K ++   
Sbjct: 182 ERKERKKRERNRKE-----------RKKERERKERRERKKERKKKEERKKERQKDRQTNW 230

Query: 272 YSK 274
             K
Sbjct: 231 REK 233



 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           + R+ +E++E+ER++      RE     + E  +V     ++ K+K ++  K++ER +K+
Sbjct: 137 EERKREERKERERKKEEREKERERKERKKRERKQVGEKEEER-KEKERKERKKRERNRKE 195

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIK-KVKKKKKKKHKENEK 265
            K   E +KE  E K   K  +E+ K   +D Q   + K++ K++ KE +K
Sbjct: 196 RKKERE-RKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245



 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)

Query: 162 EKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNE 221
           E RE+ER        R+ G   RE   + +   R+K K   +ER+KE++RE+ K +   E
Sbjct: 37  EIREREREIE----TRKEGKKERESERKKERREREKRK---REREKERKRERGKKEKKGE 89

Query: 222 IKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPK 270
            KKE  E K   K  +EK     E+    K K+KKK+K +     K  K
Sbjct: 90  RKKEERERK---KRRREKENKEGEE----KEKRKKKEKKERGRTSKEGK 131



 Score = 41.6 bits (96), Expect = 0.003
 Identities = 22/80 (27%), Positives = 47/80 (58%)

Query: 195 RDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKK 254
           R++  +  KE  KE+E E+KK +   E +K   E +   + GK++ K   +  + ++ K+
Sbjct: 41  REREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKR 100

Query: 255 KKKKKHKENEKRKRPKMYSK 274
           +++K++KE E++++ K   K
Sbjct: 101 RREKENKEGEEKEKRKKKEK 120



 Score = 38.5 bits (88), Expect = 0.026
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 177 REAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSG 236
           RE    +R+E  + +   R K + + ++R +E+E+E+K+ +   E K E  + +   K  
Sbjct: 41  REREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKK- 99

Query: 237 KEKPKTNIEDLQIKKVKKKKKKKH----KENEKRKR 268
           + + K N E  + +K KKK+KK+     KE ++R+R
Sbjct: 100 RRREKENKEGEEKEKRKKKEKKERGRTSKEGKERER 135


>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
           [Homo sapiens]
          Length = 624

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           +S+ P +KR K R R        +    ++   ++K   R K KD+ KER++EKEREK+K
Sbjct: 350 RSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEK 409

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            +  N+ + +  E     +  KEK +    + + +K + K+K+K ++ EK +R K  SK 
Sbjct: 410 ERGKNKDRDKEREKD--REKDKEKDREREREKEHEKDRDKEKEKEQDKEK-EREKDRSKE 466

Query: 276 I 276
           I
Sbjct: 467 I 467



 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 19/120 (15%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K R  ++ REKER R       E      +E G+ K   RDK ++K +E+DKEK+RE+++
Sbjct: 387 KERVKEKDREKERER-------EKEREKEKERGKNKD--RDKEREKDREKDKEKDRERER 437

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            K   E +K+  +        KEK +   ++ +  + K+  +K+ K+ + R  P+ Y+ S
Sbjct: 438 EK---EHEKDRDK-------EKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNAS 487



 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 18/122 (14%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEV-----------KPLPRDKIKDKIKE 204
           K R  + +REKER +    G  +     RE++ E            K   +D+ K+K KE
Sbjct: 393 KDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKE 452

Query: 205 RDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENE 264
           +DKEKEREK + K ++E +K++       K  +  P++     + +   ++++++   + 
Sbjct: 453 QDKEKEREKDRSKEIDEKRKKD-------KKSRTPPRSYNASRRSRSSSRERRRRRSRSS 505

Query: 265 KR 266
            R
Sbjct: 506 SR 507



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 7/127 (5%)

Query: 152 SANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKER 211
           +A+ +SR    +R + R R      R +    R+ +    P  R+K KDK +E++++   
Sbjct: 485 NASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK-KDKKREKERDHIS 543

Query: 212 EKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKK-HKENEKRKRPK 270
           E+++ +    ++K + +     + GKEK + N   L+ K+  K+      KE + +  P+
Sbjct: 544 ERRERERSTSMRKSSND-----RDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 598

Query: 271 MYSKSIQ 277
                IQ
Sbjct: 599 TEENKIQ 605



 Score = 40.8 bits (94), Expect = 0.005
 Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 19/117 (16%)

Query: 151 ASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKE 210
           +S+ + SRR + + +   R H    +R+                R + K   K+R K +E
Sbjct: 318 SSSKSHSRRKRSQSKHRSRSHNRSRSRQKD--------------RRRSKSPHKKRSKSRE 363

Query: 211 REKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRK 267
           R K + +  +  K+++   KI     KEK +   +D + ++ ++K+++K KE  K K
Sbjct: 364 RRKSRSRSHSRDKRKDTREKI-----KEKERVKEKDREKEREREKEREKEKERGKNK 415


>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
           [Homo sapiens]
          Length = 508

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           +S+ P +KR K R R        +    ++   ++K   R K KD+ KER++EKEREK+K
Sbjct: 234 RSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEK 293

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            +  N+ + +  E     +  KEK +    + + +K + K+K+K ++ EK +R K  SK 
Sbjct: 294 ERGKNKDRDKEREKD--REKDKEKDREREREKEHEKDRDKEKEKEQDKEK-EREKDRSKE 350

Query: 276 I 276
           I
Sbjct: 351 I 351



 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 19/120 (15%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K R  ++ REKER R       E      +E G+ K   RDK ++K +E+DKEK+RE+++
Sbjct: 271 KERVKEKDREKERER-------EKEREKEKERGKNKD--RDKEREKDREKDKEKDRERER 321

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            K   E +K+  +        KEK +   ++ +  + K+  +K+ K+ + R  P+ Y+ S
Sbjct: 322 EK---EHEKDRDK-------EKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNAS 371



 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 18/122 (14%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEV-----------KPLPRDKIKDKIKE 204
           K R  + +REKER +    G  +     RE++ E            K   +D+ K+K KE
Sbjct: 277 KDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKE 336

Query: 205 RDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENE 264
           +DKEKEREK + K ++E +K++       K  +  P++     + +   ++++++   + 
Sbjct: 337 QDKEKEREKDRSKEIDEKRKKD-------KKSRTPPRSYNASRRSRSSSRERRRRRSRSS 389

Query: 265 KR 266
            R
Sbjct: 390 SR 391



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 7/127 (5%)

Query: 152 SANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKER 211
           +A+ +SR    +R + R R      R +    R+ +    P  R+K KDK +E++++   
Sbjct: 369 NASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK-KDKKREKERDHIS 427

Query: 212 EKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKK-HKENEKRKRPK 270
           E+++ +    ++K + +     + GKEK + N   L+ K+  K+      KE + +  P+
Sbjct: 428 ERRERERSTSMRKSSND-----RDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 482

Query: 271 MYSKSIQ 277
                IQ
Sbjct: 483 TEENKIQ 489



 Score = 40.8 bits (94), Expect = 0.005
 Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 19/117 (16%)

Query: 151 ASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKE 210
           +S+ + SRR + + +   R H    +R+                R + K   K+R K +E
Sbjct: 202 SSSKSHSRRKRSQSKHRSRSHNRSRSRQKD--------------RRRSKSPHKKRSKSRE 247

Query: 211 REKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRK 267
           R K + +  +  K+++   KI     KEK +   +D + ++ ++K+++K KE  K K
Sbjct: 248 RRKSRSRSHSRDKRKDTREKI-----KEKERVKEKDREKEREREKEREKEKERGKNK 299


>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
           sapiens]
          Length = 929

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 44/293 (15%)

Query: 16  PTATVSEKEPFGKLQLSSRDPP---GSLSA----KKVRTEEKKAPRRVNGEGGSGGNSRQ 68
           P+AT+SEK     +Q+     P   G L++    KK    +K     ++         R+
Sbjct: 344 PSATLSEKISKETIQVKQIQTPPDAGKLNSENQPKKAVVADKTIEASIDAVIARACAERE 403

Query: 69  LQPPAAPSPQS-----YGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSAS------ 117
             P    S        + SP   S  P    P  S+S ++F+ S  T +P S        
Sbjct: 404 PDPFEFSSGSESEGDIFTSPKRIS-GPECTTPKASTSANNFTKSGSTPLPLSGGTSSSDN 462

Query: 118 -----ASLSQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASA------NAKSRRPKEKREK 166
                AS+ + V +  L  P+ +     ++  P+ +             K++ P     K
Sbjct: 463 SWTMDASIDEVVRKAKLGTPSNMPPNFPYISSPSVSPPTPEPLHKVYEEKTKLPSSVEVK 522

Query: 167 ERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREK-------KKHKVM 219
           ++ +  L    +     R+   E     +DK KDK KE+DK KE+EK        K+   
Sbjct: 523 KKLKKELKTKMKKKEKQRDRERE-----KDKNKDKSKEKDKVKEKEKDKETGRETKYPWK 577

Query: 220 NEIKKENGE-VKILLKSGKE-KPKTNIEDLQIKKVKKKKKKKHKENEKRKRPK 270
             +K+E  +  K  +K  ++  PK  ++D  ++K K+K K K K+ EK K+ K
Sbjct: 578 EFLKEEEADPYKFKIKEFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDK 630



 Score = 40.4 bits (93), Expect = 0.007
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 14/69 (20%)

Query: 203 KERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKE 262
           +E++K KE+EKKK K   + KKE           KEK K   ++ + +K K++++K+ KE
Sbjct: 691 EEKEKVKEKEKKKDKKEKKKKKE-----------KEKEK---KEKEREKEKREREKREKE 736

Query: 263 NEKRKRPKM 271
            EK K  K+
Sbjct: 737 KEKHKHEKI 745



 Score = 38.5 bits (88), Expect = 0.026
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 10/70 (14%)

Query: 193 LPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKV 252
           LP    ++K K ++KEK+++KK+ K   E +KE  E +      +EK K   E    K+ 
Sbjct: 685 LPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKE------REKEKRERE----KRE 734

Query: 253 KKKKKKKHKE 262
           K+K+K KH++
Sbjct: 735 KEKEKHKHEK 744



 Score = 35.8 bits (81), Expect = 0.17
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 38/119 (31%)

Query: 194 PRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKE-KPKTNIEDLQI--- 249
           P+ K+KD +  ++KEK ++KKK +   +  K+  E + +   G+E K K     L +   
Sbjct: 600 PKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPK 659

Query: 250 ----------------------------------KKVKKKKKKKHKENEKRKRPKMYSK 274
                                             +KVK+K+KKK K+ +K+K+ K   K
Sbjct: 660 ELALPLFSPATASRVPAMLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEK 718



 Score = 35.4 bits (80), Expect = 0.22
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 8/68 (11%)

Query: 185 EENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNI 244
           EE  +VK   ++K KDK KE+ K+KE+EK+K +   E +K   E     K  KEK K   
Sbjct: 691 EEKEKVKE--KEKKKDK-KEKKKKKEKEKEKKEKEREKEKRERE-----KREKEKEKHKH 742

Query: 245 EDLQIKKV 252
           E ++++ V
Sbjct: 743 EKIKVEPV 750



 Score = 32.3 bits (72), Expect = 1.9
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 15/102 (14%)

Query: 127 KLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPK----------EKREKERRRHGLGGA 176
           K+  P   L   P  L LP  + A ++   +  P           E++EK + +      
Sbjct: 646 KMKAPAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLPEKLFEEKEKVKEKEKKKDK 705

Query: 177 REAGGASREENGEVKPLPRDKIKDKIKERDK-EKEREKKKHK 217
           +E     +E+  E K   R+K K   +ER+K EKE+EK KH+
Sbjct: 706 KEKK-KKKEKEKEKKEKEREKEK---REREKREKEKEKHKHE 743


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 123

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K ++ K++ E+           E  G  +E+  E +     K K K  E+ KEKE E+KK
Sbjct: 2   KKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            K   + KKE  E +   +  +E+ K   E  + ++ KKKKK++ KE E+ K+ K   K+
Sbjct: 62  RKRKRKKKKEEEE-REEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKT 120



 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 6/119 (5%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           ++   +E  E E      G  +E     R+E  E K   ++  K K KE +++K + K+K
Sbjct: 9   ETEETEETEETEEEEEKEGKRKEKRKEKRKEK-EKKKKTKETEKRKEKEEEEKKRKRKRK 67

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSK 274
            K   E ++E  E     +  +EK +   E+ + +K KKK+++K +E EK+K+ +  +K
Sbjct: 68  KKKEEEEREEEEE-----EEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTK 121



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 12/106 (11%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K +R ++++EKE+++      +E      +E  E K   + K K + +ER++E+E E+++
Sbjct: 30  KEKRKEKRKEKEKKKK----TKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEE 85

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
            +   E +KE G      +  K+K +   E+ + KK K+++K K K
Sbjct: 86  KE---EEEKEEGR-----RRKKKKKRRRKEEEEEKKKKRRRKTKKK 123



 Score = 39.7 bits (91), Expect = 0.012
 Identities = 24/77 (31%), Positives = 40/77 (51%)

Query: 191 KPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIK 250
           K   + K + +  E  +E E E++K     E +KE  + K   K  KE  K   ++ + K
Sbjct: 1   KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEK 60

Query: 251 KVKKKKKKKHKENEKRK 267
           K K+K+KKK +E E+ +
Sbjct: 61  KRKRKRKKKKEEEEREE 77



 Score = 35.4 bits (80), Expect = 0.22
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 208 EKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRK 267
           +K+++KKK     E  +E  E +   K GK K K      + K+ +K+KKKK KE EKRK
Sbjct: 1   KKKKKKKKETEETEETEETEEEE--EKEGKRKEKR-----KEKRKEKEKKKKTKETEKRK 53

Query: 268 RPKMYSK 274
             +   K
Sbjct: 54  EKEEEEK 60



 Score = 34.7 bits (78), Expect = 0.38
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)

Query: 207 KEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKK-----KKKKKHK 261
           K+K+++KK+ +   E ++   E +   K GK K K   +  + +K KK     K+K+K +
Sbjct: 1   KKKKKKKKETEETEETEETEEEEE---KEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEE 57

Query: 262 ENEKRKRPKMYSK 274
           E +KRKR +   K
Sbjct: 58  EEKKRKRKRKKKK 70


>gi|125656165 THO complex 2 [Homo sapiens]
          Length = 1593

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 12/131 (9%)

Query: 145  PAAAAAASANAKSRRPKEKREKERRRH--GLGGAREAGGAS---REENGEVKPLPRDKIK 199
            P++++  SA+       E+ +K R R   G+    +A   +      NG         +K
Sbjct: 1208 PSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGSNSNKAVK 1267

Query: 200  DKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTN--IEDLQIKKVKKKKK 257
            +  KE+ KEKE+EKK+     +      E ++L K GKEKPK     +D + ++ K++  
Sbjct: 1268 ENDKEKGKEKEKEKKE-----KTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTP 1322

Query: 258  KKHKENEKRKR 268
            K  KE EK K+
Sbjct: 1323 KSDKEKEKFKK 1333



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 15/126 (11%)

Query: 150  AASANAKSR-RPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKE 208
            A   N K + + KEK +KE+       AR  G   +E+  E +P   +K ++  KER  +
Sbjct: 1265 AVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARET-KERTPK 1323

Query: 209  KEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKR 268
             ++EK+K K     K+E        K+  EK KT + + + K  ++++++K    E+   
Sbjct: 1324 SDKEKEKFK-----KEE--------KAKDEKFKTTVPNAESKSTQEREREKEPSRERDIA 1370

Query: 269  PKMYSK 274
             +M SK
Sbjct: 1371 KEMKSK 1376



 Score = 37.7 bits (86), Expect = 0.045
 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 23/187 (12%)

Query: 95   PSPSSSRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASAN 154
            PSPS S S+   S      SSA   ++         PP L  ++   +       +   +
Sbjct: 1416 PSPSHS-STVKDSLIELKESSAKLYINH-------TPPPLSKSKEREMDKKDLDKSRERS 1467

Query: 155  AKSRRPKEKREKERRRHGLGGAREAGG----ASREENGEVKPLPRDKIKDKIK-----ER 205
             +  +  EK  KER+R      RE         +EENG +  + + K +   +     E+
Sbjct: 1468 REREKKDEKDRKERKRDHSNNDREVPPDLTKRRKEENGTMG-VSKHKSESPCESPYPNEK 1526

Query: 206  DKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVK-----KKKKKKH 260
            DKEK + K   K       ++ ++  +   GK++ + + E ++ K+ +     K++KK H
Sbjct: 1527 DKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHH 1586

Query: 261  KENEKRK 267
            K ++K +
Sbjct: 1587 KSSDKHR 1593



 Score = 33.1 bits (74), Expect = 1.1
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 21/122 (17%)

Query: 156  KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKER-----DKEKE 210
            +SR  ++K EK+R+              R+ +   + +P D  K + +E       K K 
Sbjct: 1466 RSREREKKDEKDRKER-----------KRDHSNNDREVPPDLTKRRKEENGTMGVSKHKS 1514

Query: 211  REKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKK--KKKKKHKENEKRKR 268
                +    NE  KE  + K    SGKEK   + +  ++ K+    KK+ +H + +  K+
Sbjct: 1515 ESPCESPYPNEKDKEKNKSK---SSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKK 1571

Query: 269  PK 270
             K
Sbjct: 1572 EK 1573



 Score = 32.3 bits (72), Expect = 1.9
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 40/164 (24%)

Query: 145  PAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVK------------- 191
            P + +  S   +S  P+ +RE++RR+     +       ++   E+K             
Sbjct: 1386 PVSGSLKSPVPRSDIPEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYINHTPP 1445

Query: 192  PLPRDKI-----KDKIKERDKEKEREKKKHKVMNEIKK-------------------ENG 227
            PL + K      KD  K R++ +EREKK  K   E K+                   ENG
Sbjct: 1446 PLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRRKEENG 1505

Query: 228  EV---KILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKR 268
             +   K   +S  E P  N +D +  K K   K+K  ++ K ++
Sbjct: 1506 TMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEK 1549



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 21/170 (12%)

Query: 156  KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
            K R PK  +EKE+        ++   A  E+     P    K   + +ER+KE  RE+  
Sbjct: 1318 KERTPKSDKEKEK-------FKKEEKAKDEKFKTTVPNAESKSTQE-REREKEPSRERDI 1369

Query: 216  HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
             K M    KEN      +K G++ P +    L+    +    +  +E ++RK     S S
Sbjct: 1370 AKEMK--SKEN------VKGGEKTPVSG--SLKSPVPRSDIPEPEREQKRRKIDTHPSPS 1419

Query: 276  IQTICSGLLTDVEDQAAKGILNDN---IKDYVGKNLDTKNYDSKIPENSE 322
              +     L ++++ +AK  +N     +     + +D K+ D     + E
Sbjct: 1420 HSSTVKDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSRE 1469


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 31/141 (21%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           KS+R +E+RE+ERR       RE     RE+  E +   + K+K+  KERD  K++EK K
Sbjct: 561 KSKRDEEERERERREKERERERE-----REKEKE-REREKQKLKESEKERDSAKDKEKGK 614

Query: 216 H--------KVMNEIKKE-------NGEVKILLKSGKEKPKTNIEDLQIKKVKKKKK--- 257
           H        +++ ++K E         E+K+LL   +  PK   + +Q+   +KK K   
Sbjct: 615 HDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAEL 674

Query: 258 -------KKHKENEKRKRPKM 271
                  K  ++ EK++  KM
Sbjct: 675 EDLRQRLKDLEDKEKKENKKM 695


>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 33/250 (13%)

Query: 31  LSSRDPPGSLSAKKVRTEEKKA----PRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASW 86
           L +R+  G +  +K RT  +      P++ + E    G SR             GS +S 
Sbjct: 469 LEAREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRSRS------------GSSSSG 516

Query: 87  SFAPLSAAPSPSS--SRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLL------HAQ 138
           S +  S   S SS  S SS+S S+G++  SS S+S  +         PT+        + 
Sbjct: 517 SSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSY 576

Query: 139 PHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKI 198
              + + +  A      + R  +   E+ERRR+           SR  +       R + 
Sbjct: 577 SRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRS 636

Query: 199 KDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKK 258
           +D+ K  D+        HK   E K++           K++   +I+  + KK K+++++
Sbjct: 637 RDRRKIDDQRGNLSGNSHKHKGEAKEQ---------ERKKERSRSIDKDRKKKDKERERE 687

Query: 259 KHKENEKRKR 268
           + K  EK+KR
Sbjct: 688 QDKRKEKQKR 697



 Score = 38.1 bits (87), Expect = 0.035
 Identities = 55/268 (20%), Positives = 96/268 (35%), Gaps = 40/268 (14%)

Query: 40  LSAKKVRTEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSS 99
           L  KK   E++K  R  +G   SG +S   +  +  S  S  S +S S +  +++ S S 
Sbjct: 493 LEPKKEHKEKEKQGRSRSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSP 552

Query: 100 SRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLLHAQ------PHHLLLPAAAAAASA 153
            R     S   +    A  S S+   R++ +       +       +   +        +
Sbjct: 553 KRKK-RHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRS 611

Query: 154 NAKSRRPKEKREKERRRHGLGGAREA------------GGASREENGEVKPLPRDKIK-- 199
            ++ RR    R ++RR +    +R               G S +  GE K   R K +  
Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSR 671

Query: 200 -----------------DKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKT 242
                            DK KE+ K +E++ K     + +K++    +   +SG    K 
Sbjct: 672 SIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKI 731

Query: 243 NIEDLQ--IKKVKKKKKKKHKENEKRKR 268
              D +   KK   K  KKH  ++   R
Sbjct: 732 IRHDSRQDSKKSTTKDSKKHSGSDSSGR 759


>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 33/250 (13%)

Query: 31  LSSRDPPGSLSAKKVRTEEKKA----PRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASW 86
           L +R+  G +  +K RT  +      P++ + E    G SR             GS +S 
Sbjct: 469 LEAREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRSRS------------GSSSSG 516

Query: 87  SFAPLSAAPSPSS--SRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLL------HAQ 138
           S +  S   S SS  S SS+S S+G++  SS S+S  +         PT+        + 
Sbjct: 517 SSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSY 576

Query: 139 PHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKI 198
              + + +  A      + R  +   E+ERRR+           SR  +       R + 
Sbjct: 577 SRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRS 636

Query: 199 KDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKK 258
           +D+ K  D+        HK   E K++           K++   +I+  + KK K+++++
Sbjct: 637 RDRRKIDDQRGNLSGNSHKHKGEAKEQ---------ERKKERSRSIDKDRKKKDKERERE 687

Query: 259 KHKENEKRKR 268
           + K  EK+KR
Sbjct: 688 QDKRKEKQKR 697



 Score = 38.1 bits (87), Expect = 0.035
 Identities = 55/268 (20%), Positives = 96/268 (35%), Gaps = 40/268 (14%)

Query: 40  LSAKKVRTEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSS 99
           L  KK   E++K  R  +G   SG +S   +  +  S  S  S +S S +  +++ S S 
Sbjct: 493 LEPKKEHKEKEKQGRSRSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSP 552

Query: 100 SRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLLHAQ------PHHLLLPAAAAAASA 153
            R     S   +    A  S S+   R++ +       +       +   +        +
Sbjct: 553 KRKK-RHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRS 611

Query: 154 NAKSRRPKEKREKERRRHGLGGAREA------------GGASREENGEVKPLPRDKIK-- 199
            ++ RR    R ++RR +    +R               G S +  GE K   R K +  
Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSR 671

Query: 200 -----------------DKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKT 242
                            DK KE+ K +E++ K     + +K++    +   +SG    K 
Sbjct: 672 SIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKI 731

Query: 243 NIEDLQ--IKKVKKKKKKKHKENEKRKR 268
              D +   KK   K  KKH  ++   R
Sbjct: 732 IRHDSRQDSKKSTTKDSKKHSGSDSSGR 759


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 3/202 (1%)

Query: 157  SRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKH 216
            S   +E+RE+E  R       E      EE GE K + +++ + K K+++K+KE  ++K 
Sbjct: 2244 SSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKE 2303

Query: 217  KVMNEIKKENGEVKILLKSGKEKPKTNI---EDLQIKKVKKKKKKKHKENEKRKRPKMYS 273
            +V  E ++   E +    S +E+ + +    E++  +K   KK+K+ K  E+R++     
Sbjct: 2304 EVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKSLRGR 2363

Query: 274  KSIQTICSGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRV 333
            + + +I  G+          G+L   +K  +   L+ K          +  +   K   V
Sbjct: 2364 ERVLSILRGVPHGKGRAIRLGVLKSPLKKLMSTALEMKEKTPVPVPEKQISWEDKKATVV 2423

Query: 334  QNNLKRLDTLEFKQLIHIEHQP 355
            +   K L T++ ++ +  +++P
Sbjct: 2424 EIPRKFLGTMDKEREVMGKYEP 2445



 Score = 38.9 bits (89), Expect = 0.020
 Identities = 26/108 (24%), Positives = 57/108 (52%), Gaps = 1/108 (0%)

Query: 158  RRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHK 217
            R+ KE +  ++ +       +   +    + E++ L  +  K +    ++E+ERE+++ +
Sbjct: 2198 RKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEER 2257

Query: 218  VMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEK 265
               E+++E  E K   + G+EK     E+ + KK K+KKK++ +E E+
Sbjct: 2258 EEEEVREEEEERK-EEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEE 2304


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 14/135 (10%)

Query: 145 PAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKE 204
           P  A  A   A   +PK  +EK          ++      E+  E K  P+ ++  K  +
Sbjct: 615 PVKAEVAEKQATDVKPKAAKEKT--------VKKETKVKPEDKKEEKEKPKKEVAKKEDK 666

Query: 205 RDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENE 264
              +KE + KK +V  E+KKE      + K  K++PK  ++     K  KK+ KK ++ E
Sbjct: 667 TPIKKEEKPKKEEVKKEVKKE------IKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKE 720

Query: 265 KRKRPKMYSKSIQTI 279
            +K  K   K I+ +
Sbjct: 721 VKKEEKEPKKEIKKL 735



 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 8/128 (6%)

Query: 145 PAAAAAASANAKSR-RPKEKRE-KERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKI 202
           P AA   +   +++ +P++K+E KE+ +  +    +     +EE  + + + ++  K+  
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689

Query: 203 KERDKEKEREKKKHKVMNEIKKE-NGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           KE  KE ++E KK     E+KKE   E K  +K  +++PK      +IKK+ K  KK   
Sbjct: 690 KEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKK-----EIKKLPKDAKKSST 744

Query: 262 ENEKRKRP 269
              + K+P
Sbjct: 745 PLSEAKKP 752



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 163 KREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEI 222
           K++K  +        E    S+EE   VK    +K    +K +  +++  KK+ KV  E 
Sbjct: 589 KKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPED 648

Query: 223 KKENGEVKILLKSGKEKPKTNI--EDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQTIC 280
           KKE  E K   +  K++ KT I  E+   K+  KK+ KK  + E++K PK   K      
Sbjct: 649 KKEEKE-KPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKK----- 702

Query: 281 SGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLK 338
                    +  K +  +  K+   +  + K    K+P++++     L E +    LK
Sbjct: 703 ----ETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALK 756



 Score = 37.0 bits (84), Expect = 0.077
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 15/93 (16%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDK-----------IKE 204
           K   PKE +++ ++       +E     +E   E+K LP+D  K             +K 
Sbjct: 702 KETPPKEVKKEVKKEE----KKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKP 757

Query: 205 RDKEKEREKKKHKVMNEIKKENGEVKILLKSGK 237
           +  +KE   KK  V     KE G++K++ K GK
Sbjct: 758 KVPKKEESVKKDSVAAGKPKEKGKIKVIKKEGK 790



 Score = 34.7 bits (78), Expect = 0.38
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 153 ANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKE-R 211
           A  + + P +K EK ++       +      +E   E K  P+ ++K +   ++ +KE +
Sbjct: 661 AKKEDKTPIKKEEKPKKEEVKKEVK------KEIKKEEKKEPKKEVKKETPPKEVKKEVK 714

Query: 212 EKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKR 266
           +++K +V  E K+   E+K L K  K K  T + + +     K K  K +E+ K+
Sbjct: 715 KEEKKEVKKEEKEPKKEIKKLPKDAK-KSSTPLSEAKKPAALKPKVPKKEESVKK 768


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 53/338 (15%)

Query: 28  KLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWS 87
           +L  S  D  GS S K+  +E++       G   S  N  + +     + +S    +S  
Sbjct: 331 QLNFSDDDEQGSNSPKENNSEDQ-------GSKASENNENKKETDEVSNTKS----SSQI 379

Query: 88  FAPLSAAPSPSSSRSSFSFSAGTAV---PSSASASLSQPVPRKLLVP------PTLLHAQ 138
            A  S A  P     SF+   GT+    P     +   P P +  VP      P+     
Sbjct: 380 PAQPSVAKVPYGKGPSFNQERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVA 439

Query: 139 PHHLLLP------AAAAAASANAKSRRPKEKREKERRRH--------------GLGGARE 178
               +        +  +AA   A+ RR +E+R  E +R               G+   + 
Sbjct: 440 DEDEIWKQRRRQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQP 499

Query: 179 AGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKE 238
           +    RE   E K   R+K  +K +E+++EKEREK + +   + K+   E +   +  KE
Sbjct: 500 SPEEIRERERE-KEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKE 558

Query: 239 KPKTNIEDLQIKKVKKKKKKKHKENEK-----RKRPKMYSKSIQTICSGLLTDVEDQAAK 293
           + +   ++L+ +K K+K+ +K KE EK     ++R K+  K I+     L   VE Q ++
Sbjct: 559 RKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEK-IEPREPNLEPMVEKQESE 617

Query: 294 GILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKEP 331
              N   +    +       DS   E    P V   EP
Sbjct: 618 NSCNKEEEPVFTRQ------DSNRSEKEATPVVHETEP 649



 Score = 37.4 bits (85), Expect = 0.059
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 27   GKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEGGS--GGNSRQLQPPAAPSPQSYG--- 81
            G  ++ S+     L  ++ R +E++  +  N +  +  G +     PP     Q+ G   
Sbjct: 1680 GFTEVVSKKQQKRLQDEERRKKEEQVIQVWNKKNANEKGRSQTSKLPPRFAKKQATGIQQ 1739

Query: 82   SPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSAS---ASLSQPVPRKLLVPPTLLHAQ 138
            + +S S  PL++AP P S+ +S   S    +P++ +   AS S PVP   L P     + 
Sbjct: 1740 AQSSASVPPLASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSA 1799

Query: 139  PHHLLLPAAAAAASANAKSRRP 160
            P     P A  +ASA+  +  P
Sbjct: 1800 PVP-ASPLAPVSASASVSASVP 1820



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 23/114 (20%)

Query: 69   LQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVP--------------S 114
            L P +A +  S   PAS S A ++++ +P+S+ +     A  + P              +
Sbjct: 1806 LAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILA 1865

Query: 115  SASASLSQPVP--------RKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRP 160
            SA AS S P P          ++  PT+  + P    +P A A+ASA A +  P
Sbjct: 1866 SALASTSAPTPAPAASSPAAPVITAPTIPASAP-TASVPLAPASASAPAPAPTP 1918


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 31/241 (12%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           KSR  + +RE+ER R             RE   E     R++ +++ +ER++E+EREK K
Sbjct: 387 KSRDRERERERERERE------------RERERE-----REREREREREREREREREKDK 429

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKT------NIEDLQIKKVKKKKKKKHKENEKRKRP 269
            +   E +++  E + L +  +EK         N E  + KK ++ +K+  +E E+R+  
Sbjct: 430 KRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREM 489

Query: 270 KMYSKSIQTICSGLLTDVED------QAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEF 323
              +K ++        D +D       A +  L D  K+      D K    ++ E  + 
Sbjct: 490 AKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQ- 548

Query: 324 PFVSLKEPRVQNNLKRLD-TLEFKQLIHIEHQPNGGASVIHAYSNELSHLSPMEMERFAE 382
             ++   P     L+R++   E ++   I+ +P            E     PME E   E
Sbjct: 549 RLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPE 608

Query: 383 E 383
           +
Sbjct: 609 Q 609



 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 24/113 (21%), Positives = 59/113 (52%), Gaps = 1/113 (0%)

Query: 156 KSRRPKEK-REKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKK 214
           K RR +E+ RE+ER R      RE      +E    +   RD+ +D+ KERD++++RE+ 
Sbjct: 307 KERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERD 366

Query: 215 KHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRK 267
           + +        N +     +  +++ +    + + ++ +++++++ +E E+ +
Sbjct: 367 RDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERER 419



 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 24/113 (21%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 159 RPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKV 218
           R +E+RE+ER R      RE       E    +   RD+ K++ ++RD+E++R++ + + 
Sbjct: 318 RERERRERERERER---EREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERS 374

Query: 219 MNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEK-RKRPK 270
            +  K  +   +      +E+ +    + + ++ +++++++ +E E+ R+R K
Sbjct: 375 SDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREK 427



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/107 (18%), Positives = 57/107 (53%)

Query: 161 KEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMN 220
           +EK +KE+ R  +   R      RE   E +   R++ +++ +E++KE+ERE+++ +  +
Sbjct: 293 EEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRD 352

Query: 221 EIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRK 267
             K+ + +        +++ +++  +    + ++K + + +E E+ +
Sbjct: 353 RTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERER 399



 Score = 40.4 bits (93), Expect = 0.007
 Identities = 24/122 (19%), Positives = 61/122 (50%), Gaps = 5/122 (4%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           + R  +  R+++R R      R+       +  + +   R+K +D+ +ER++E+ERE+++
Sbjct: 351 RDRTKERDRDRDRERD-----RDRDRERSSDRNKDRSRSREKSRDRERERERERERERER 405

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKS 275
            +     ++   E +   +  K+K +   ED +    ++K ++K +E E   + ++ +  
Sbjct: 406 EREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWE 465

Query: 276 IQ 277
           I+
Sbjct: 466 IR 467



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 6/130 (4%)

Query: 147 AAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENG--EVKPLPRDKIK---DK 201
           A +  S +   ++ KEK+E   RR  +         ++E+    E++   RD I     K
Sbjct: 224 APSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISK 283

Query: 202 IKERDKEKEREK-KKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKH 260
            ++  K+ E EK KK K   EI+KE  E +   +  +E+ +   E  + ++ +K+K+++ 
Sbjct: 284 FRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERER 343

Query: 261 KENEKRKRPK 270
           +    R R +
Sbjct: 344 ERERDRDRDR 353


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 39/266 (14%)

Query: 5   PSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEGGSGG 64
           P P H +    P+   +   P G+++   R      S      E+K   +R         
Sbjct: 484 PGPGHTLPPKPPSPRGTTASPKGRVR---RKEEAKESPSAAGPEDKSQSKR------RAS 534

Query: 65  NSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASLSQPV 124
           N ++   PA+P+P    SP     AP      P+ +            P+ A+   S P 
Sbjct: 535 NEKESAAPASPAPSPAPSPTP---APPQKEQPPAET------------PTDAAVLTSPPA 579

Query: 125 PRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASR 184
           P   + P     ++P         A      K R+ +E+RE+E +   L   R+     R
Sbjct: 580 PAPPVTP-----SKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDK--RMR 632

Query: 185 EENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNI 244
           EE    +   R + + + + R++++ REK         + E  E + L K  +E    + 
Sbjct: 633 EEQLAREAEARAEREAEARRREEQEAREK--------AQAEQEEQERLQKQKEEAEARSR 684

Query: 245 EDLQIKKVKKKKKKKHKENEKRKRPK 270
           E+ + ++++++K  + +E E+++R K
Sbjct: 685 EEAERQRLEREKHFQQQEQERQERRK 710



 Score = 32.3 bits (72), Expect = 1.9
 Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 31/250 (12%)

Query: 50  KKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAG 109
           +  PR   G G       +  P   PSP+   SP     + L     P +          
Sbjct: 2   ESGPRAELGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPPDTP--------- 52

Query: 110 TAVPSSASASLSQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERR 169
              P+  +A+ S+ +P +   P   +  +P     P    + S+ AKSR P       R 
Sbjct: 53  ---PAMKNATSSKQLPLEPESPSGQVGPRP----APPQEESPSSEAKSRGPTPPAMGPR- 104

Query: 170 RHGLGGAREAGGASREENGEVKPLPRDKIKDKIK---ERDK-EKEREKKKHKVMNEIK-- 223
                 AR    +S+     V        K ++K   ER K  KER +++ K +   K  
Sbjct: 105 -----DARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAV 159

Query: 224 --KENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEK-RKRPKMYSKSIQTIC 280
             ++  + K L +   ++ +  +E+ ++K  +++   + ++ +K  K  + Y  +IQ   
Sbjct: 160 WLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSV 219

Query: 281 SGLLTDVEDQ 290
                ++  Q
Sbjct: 220 KKTWAEIRQQ 229


>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
          Length = 600

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 15/160 (9%)

Query: 149 AAASANAKSRRPKEKREKERRRHGLGGAREAG-----GASREENGEV-KPLPRDKIKDKI 202
           A      + R    K+E+E++    G  R  G        REE  EV K    +K+K + 
Sbjct: 172 AGKDGRGEERAVATKKEEEKK----GSDRNTGLSRDKDKKREEMKEVAKKEDDEKVKGER 227

Query: 203 KERDKEKEREKKKHKVMN-EIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           +  D  KE EK K    N ++KKE+ +VK     G     T  +D ++KK +   +K+ K
Sbjct: 228 RNTDTRKEGEKMKRAGGNTDMKKEDEKVK----RGTGNTDTKKDDEKVKKNEPLHEKEAK 283

Query: 262 ENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNIK 301
           ++ K K P+  + S  T  S     VE++AA  I ++ ++
Sbjct: 284 DDSKTKTPEKQTPSGPTKPSEGPAKVEEEAAPSIFDEPLE 323


>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
          Length = 237

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 17/138 (12%)

Query: 146 AAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKER 205
           +++++ S +   ++ K +++K+ R H          +S     E +   +D +K K K +
Sbjct: 105 SSSSSDSEDEDKKQGKRRKKKKNRSHK---------SSESSMSETESDSKDSLKKKKKSK 155

Query: 206 D-KEKERE----KKKHKVMNEIKKENGEV---KILLKSGKEKPKTNIEDLQIKKVKKKKK 257
           D  EKE++     KK K+ +E K  + E       ++  + K K + E+ +    K KKK
Sbjct: 156 DGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKK 215

Query: 258 KKHKENEKRKRPKMYSKS 275
           KKHK++ K+K+ K  S S
Sbjct: 216 KKHKKHSKKKKKKAASSS 233



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)

Query: 203 KERDKEKEREKKKHKVMNEIK-KENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           +E  ++ E++KK  K + E + K N   K  L+  +EK  +  E    K+ +KKK+KK  
Sbjct: 32  EEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKS 91

Query: 262 ENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENS 321
                      S S  +  S   +D ED+  K       K    KN   K+ +S + E  
Sbjct: 92  GRYSS------SSSSSSDSSSSSSDSEDEDKKQGKRRKKK----KNRSHKSSESSMSETE 141

Query: 322 EFPFVSLKEPRVQNN----LKRLDTLEFKQLIHIEHQPNGGASV 361
                SLK+ +   +     K +  L  K+ ++ E +P    S+
Sbjct: 142 SDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESL 185


>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
          Length = 247

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 17/138 (12%)

Query: 146 AAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKER 205
           +++++ S +   ++ K +++K+ R H          +S     E +   +D +K K K +
Sbjct: 115 SSSSSDSEDEDKKQGKRRKKKKNRSHK---------SSESSMSETESDSKDSLKKKKKSK 165

Query: 206 D-KEKERE----KKKHKVMNEIKKENGEV---KILLKSGKEKPKTNIEDLQIKKVKKKKK 257
           D  EKE++     KK K+ +E K  + E       ++  + K K + E+ +    K KKK
Sbjct: 166 DGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKK 225

Query: 258 KKHKENEKRKRPKMYSKS 275
           KKHK++ K+K+ K  S S
Sbjct: 226 KKHKKHSKKKKKKAASSS 243



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)

Query: 203 KERDKEKEREKKKHKVMNEIK-KENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           +E  ++ E++KK  K + E + K N   K  L+  +EK  +  E    K+ +KKK+KK  
Sbjct: 42  EEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKKKEKKKS 101

Query: 262 ENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENS 321
                      S S  +  S   +D ED+  K       K    KN   K+ +S + E  
Sbjct: 102 GRYSS------SSSSSSDSSSSSSDSEDEDKKQGKRRKKK----KNRSHKSSESSMSETE 151

Query: 322 EFPFVSLKEPRVQNN----LKRLDTLEFKQLIHIEHQPNGGASV 361
                SLK+ +   +     K +  L  K+ ++ E +P    S+
Sbjct: 152 SDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESL 195


>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing B [Homo sapiens]
          Length = 546

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 27/230 (11%)

Query: 43  KKVRTEEKKAPRRVNGEGGSGGNS--RQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSS 100
           K +  + K  PR++  +G  G     R ++   + SP+   SP          +P  S S
Sbjct: 227 KNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRR--------SPRRSRS 278

Query: 101 RSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRP 160
           RS      G+   SS    L +   R+ L        +                ++SR  
Sbjct: 279 RSHHREGHGS---SSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRER 335

Query: 161 KEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMN 220
              R + R R G    R+      +EN   +   RD  K++  ER+KE+ER +++ K   
Sbjct: 336 HRSRSRSRDRKG--DRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKE-- 391

Query: 221 EIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKK--KKKKKHKENEKRKR 268
             ++  GEV+      ++K K + +D + +  K+  KK+KKH  +  R+R
Sbjct: 392 --QRSRGEVE------EKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRER 433



 Score = 40.8 bits (94), Expect = 0.005
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 23/170 (13%)

Query: 125 PRKLLVP---PTLLHAQPHHLLLPAAAAAASANAKSRRPKEK---------REKERRR-- 170
           PR+ L P   P    ++ HH        ++S + +  R KE+         REKERRR  
Sbjct: 263 PRRSLSPRRSPRRSRSRSHHR---EGHGSSSFDRELEREKERQRLEREAKEREKERRRSR 319

Query: 171 ---HGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENG 227
               GL   R             +    D+ +D+ +ER+KE ER +++ +  ++ +    
Sbjct: 320 SIDRGLERRRSRSRERHRSRSRSRDRKGDR-RDRDREREKENERGRRRDRDYDKERGNER 378

Query: 228 EVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKR--KRPKMYSKS 275
           E +      + K + +  +++ KK K+ K  +   ++KR  K+ K +S+S
Sbjct: 379 EKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRS 428



 Score = 33.9 bits (76), Expect = 0.65
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 17/109 (15%)

Query: 163 KREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREK-KKHKVMNE 221
           +REKER R     +RE     R   GEV+     + KD  + RD +++ +K KKH     
Sbjct: 377 EREKERER-----SRERSKEQRSR-GEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRS 430

Query: 222 IKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPK 270
            ++++        +GK            +   K+K  KHK   K K  K
Sbjct: 431 RERKHRSRSRSRNAGKRS----------RSRSKEKSSKHKNESKEKSNK 469



 Score = 32.7 bits (73), Expect = 1.5
 Identities = 21/126 (16%), Positives = 55/126 (43%), Gaps = 2/126 (1%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK 215
           K ++    R +ER+      +R AG  SR  + E     +++ K+K  +R +   + +  
Sbjct: 421 KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTD 480

Query: 216 HKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKK--KKKHKENEKRKRPKMYS 273
               ++ ++ +   +   K  + K +++  D    K +  K  +++ +  E+  + K + 
Sbjct: 481 SVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHK 540

Query: 274 KSIQTI 279
              +T+
Sbjct: 541 NKDETV 546


>gi|48255931 hepatoma-derived growth factor-related protein 2
           isoform 1 [Homo sapiens]
          Length = 671

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 52/310 (16%)

Query: 47  TEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSF 106
           T EKKA  R    G  GG  ++  P A+ S     S          A P P +   S S 
Sbjct: 205 TPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSD--------GAKPEPVAMARSASS 256

Query: 107 SAGTAVPSSASASLSQPVPR------KLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRP 160
           S+ ++  S +  S+ +P PR      K L  P     +P     P+++++ S + +  R 
Sbjct: 257 SSSSSSSSDSDVSVKKP-PRGRKPAEKPLPKPRGRKPKPER--PPSSSSSDSDSDEVDRI 313

Query: 161 KE-KREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK---H 216
            E KR  E RR  L   R      RE+  E++ L   + ++K + R++    E ++    
Sbjct: 314 SEWKRRDEARRRELEARRR-----REQEEELRRLREQEKEEKERRRERADRGEAERGSGG 368

Query: 217 KVMNEIKKENGEVKILLKSGKEKPKTNIED------LQIKKVKKKKKKKHKENEKRKRPK 270
              +E+++++  VK   + G+ +   +  D      L+ +  K  KK +    E  ++P 
Sbjct: 369 SSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPG 428

Query: 271 MYSKSIQTICSGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKE 330
              K ++          E Q AK +  +  +    K  +  + D K+ +         KE
Sbjct: 429 QKEKRVR--------PEEKQQAKPVKVERTR----KRSEGFSMDRKVEKK--------KE 468

Query: 331 PRVQNNLKRL 340
           P V+  L++L
Sbjct: 469 PSVEEKLQKL 478



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 23/153 (15%)

Query: 145 PAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASR----EENGEVKPLPRDKIK- 199
           P +++ +   A+  R  +K  K+ +      AR+ G   +    EE  + KP+  ++ + 
Sbjct: 393 PPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRK 452

Query: 200 -------DKIKERDKEKEREKKKHKVMNEI----KKENGEVKILLKSGKEKPKTNIEDLQ 248
                  D+  E+ KE   E+K  K+ +EI    K ++ +VK  L + +E     +    
Sbjct: 453 RSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQI 512

Query: 249 IKK-------VKKKKKKKHKENEKRKRPKMYSK 274
           ++K       +KK ++ K  ++   K  ++Y++
Sbjct: 513 LQKNTDVVATLKKIRRYKANKDVMEKAAEVYTR 545


>gi|14249158 hepatoma-derived growth factor-related protein 2
           isoform 2 [Homo sapiens]
          Length = 670

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 52/310 (16%)

Query: 47  TEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSF 106
           T EKKA  R    G  GG  ++  P A+ S     S          A P P +   S S 
Sbjct: 205 TPEKKAAVRAPRRGPLGGRKKKKAPSASDSDSKADSD--------GAKPEPVAMARSASS 256

Query: 107 SAGTAVPSSASASLSQPVPR------KLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRP 160
           S+ ++  S +  S+ +P PR      K L  P     +P     P+++++ S + +  R 
Sbjct: 257 SSSSSSSSDSDVSVKKP-PRGRKPAEKPLPKPRGRKPKPER--PPSSSSSDSDSDEVDRI 313

Query: 161 KE-KREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKK---H 216
            E KR  E RR  L   R      RE+  E++ L   + ++K + R++    E ++    
Sbjct: 314 SEWKRRDEARRRELEARRR-----REQEEELRRLREQEKEEKERRRERADRGEAERGSGG 368

Query: 217 KVMNEIKKENGEVKILLKSGKEKPKTNIED------LQIKKVKKKKKKKHKENEKRKRPK 270
              +E+++++  VK   + G+ +   +  D      L+ +  K  KK +    E  ++P 
Sbjct: 369 SSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPG 428

Query: 271 MYSKSIQTICSGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKE 330
              K ++          E Q AK +  +  +    K  +  + D K+ +         KE
Sbjct: 429 QKEKRVR--------PEEKQQAKPVKVERTR----KRSEGFSMDRKVEKK--------KE 468

Query: 331 PRVQNNLKRL 340
           P V+  L++L
Sbjct: 469 PSVEEKLQKL 478



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 23/153 (15%)

Query: 145 PAAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASR----EENGEVKPLPRDKIK- 199
           P +++ +   A+  R  +K  K+ +      AR+ G   +    EE  + KP+  ++ + 
Sbjct: 393 PPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRK 452

Query: 200 -------DKIKERDKEKEREKKKHKVMNEI----KKENGEVKILLKSGKEKPKTNIEDLQ 248
                  D+  E+ KE   E+K  K+ +EI    K ++ +VK  L + +E     +    
Sbjct: 453 RSEGFSMDRKVEKKKEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQI 512

Query: 249 IKK-------VKKKKKKKHKENEKRKRPKMYSK 274
           ++K       +KK ++ K  ++   K  ++Y++
Sbjct: 513 LQKNTDVVATLKKIRRYKANKDVMEKAAEVYTR 545


>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
          Length = 248

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 38/156 (24%)

Query: 152 SANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKE------- 204
           S++ K  R K++++K  R      + ++  +S +   E K   + + K K +        
Sbjct: 86  SSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSS 145

Query: 205 ----RDKEKEREKKKHKVMNEIKKENGEVKILLKSGK-----EKPKTNI--------EDL 247
                 + KE  KKK K  +E +KE  +V+ L K  K     +KP ++         ED+
Sbjct: 146 THESESESKESVKKKKKSKDETEKEK-DVRSLSKKRKKSYPDDKPLSSESSSESDYEEDV 204

Query: 248 QIKK-------------VKKKKKKKHKENEKRKRPK 270
           Q KK             VKKKKKK+HK++ K+K+ K
Sbjct: 205 QAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKK 240



 Score = 32.0 bits (71), Expect = 2.5
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 26/114 (22%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDK--IKDKIKERDKEKEREK 213
           K ++ K++ EKE+    L   R+            K  P DK    +   E D E++ + 
Sbjct: 159 KKKKSKDETEKEKDVRSLSKKRK------------KSYPDDKPLSSESSSESDYEEDVQA 206

Query: 214 KKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRK 267
           KK +   E ++   +VK      K+K K      Q KK  KKKKKK   + K +
Sbjct: 207 KKKRRCEEREQAKEKVK------KKKKK------QHKKHSKKKKKKSGSSHKSR 248



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 29/145 (20%)

Query: 146 AAAAAASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKER 205
           +++ ++S+++ S   ++K+ K R++      + +  ++ E   E K    + +K K K +
Sbjct: 109 SSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESK----ESVKKKKKSK 164

Query: 206 DKEKEREKKKHKVMNEIKKENGEVKILL------------------------KSGKEKPK 241
           D E E+EK    +  + KK   + K L                         +  KEK K
Sbjct: 165 D-ETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVK 223

Query: 242 TNIEDLQIKKVKKKKKKKHKENEKR 266
              +    K  KKKKKK    ++ R
Sbjct: 224 KKKKKQHKKHSKKKKKKSGSSHKSR 248



 Score = 30.4 bits (67), Expect = 7.2
 Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 15/179 (8%)

Query: 163 KREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEI 222
           K++ E ++ G     E      E   +     R+K+    +   K++ER+KK+ K     
Sbjct: 45  KKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRS 104

Query: 223 KKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK--ENEKRKRPKMYSKSIQTIC 280
              +        S      ++ ED + K+ K++KKKK++  ++ +    +  S+S +++ 
Sbjct: 105 SSSSSS------SDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVK 158

Query: 281 SGLLTDVEDQAAKGILNDNIKDYVGKNLDTKNYDSKIPENSEFPFVSLKEPRVQNNLKR 339
               +  E +  K + + + K         K+Y    P +SE    S  E  VQ   KR
Sbjct: 159 KKKKSKDETEKEKDVRSLSKK-------RKKSYPDDKPLSSESSSESDYEEDVQAKKKR 210


>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
          Length = 354

 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 10/129 (7%)

Query: 41  SAKKVRTEEKKAPRRVNGEGGSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSS 100
           S  +V  + ++A  R   + GSG  SR  +  ++P  +S GS +S  F P + + S SSS
Sbjct: 80  SRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSGSESSGQFTPPAVSSSASSS 139

Query: 101 RSSFSFSAGTAV---------PSSASASLSQPVPRKLLVPPTLL-HAQPHHLLLPAAAAA 150
            S+ S SA  A          P +A++SLS P    +  P ++   + P  + +P   AA
Sbjct: 140 SSASSSSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSAPASVSVPEPLAA 199

Query: 151 ASANAKSRR 159
            S  +  +R
Sbjct: 200 PSNTSCMQR 208


>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 27/75 (36%), Positives = 43/75 (57%)

Query: 193 LPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKV 252
           LP   +  + ++++KEKE++KKK K   + KK+  + K   K  K+K K   +  + +K 
Sbjct: 94  LPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153

Query: 253 KKKKKKKHKENEKRK 267
           K+KKKKK   NE  K
Sbjct: 154 KRKKKKKKTGNEGAK 168



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 16/72 (22%)

Query: 203 KERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKE 262
           +E  KEKE+EKKK K   + KK+        K  K+K K        KK KKKKK+K K 
Sbjct: 102 REEKKEKEKEKKKKKKKKKKKKK--------KKKKKKKK--------KKKKKKKKRKRKR 145

Query: 263 NEKRKRPKMYSK 274
             KRKR K   K
Sbjct: 146 KRKRKRKKKRKK 157



 Score = 37.4 bits (85), Expect = 0.059
 Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 15/86 (17%)

Query: 180 GGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEK 239
           G   REE  E +   + K K K K++ K+K+++KKK K                K  K K
Sbjct: 98  GLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKK---------------KKKKKRK 142

Query: 240 PKTNIEDLQIKKVKKKKKKKHKENEK 265
            K   +  + KK KKKKKK   E  K
Sbjct: 143 RKRKRKRKRKKKRKKKKKKTGNEGAK 168



 Score = 34.3 bits (77), Expect = 0.50
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 233 LKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSK 274
           L   +EK +   E  + KK KKKKKKK K+ +K+K+ K   K
Sbjct: 99  LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 140



 Score = 33.1 bits (74), Expect = 1.1
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 171 HGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVK 230
           HGL    E     +E+  + K   + K K K K++ K+K+++KKK K   + K++    K
Sbjct: 97  HGLPQREEKKEKEKEKKKKKK---KKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153

Query: 231 ILLKSGKEKPKTNIEDLQI 249
              K  K+K KT  E  +I
Sbjct: 154 ---KRKKKKKKTGNEGAKI 169



 Score = 32.7 bits (73), Expect = 1.5
 Identities = 27/127 (21%), Positives = 60/127 (47%), Gaps = 9/127 (7%)

Query: 95  PSPSSSRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASAN 154
           P   S+ S+ S  + T +P S++  L   +    L+      A P  L LP         
Sbjct: 48  PCLLSTHSTHSDPSATVLPGSSTHRLKGKIFH--LISIAFCDAGPS-LHLPLHGLPQREE 104

Query: 155 AKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKK 214
            K +  ++K++K++++      ++     +++  + K   + + + + ++R ++K+R+KK
Sbjct: 105 KKEKEKEKKKKKKKKK------KKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158

Query: 215 KHKVMNE 221
           K K  NE
Sbjct: 159 KKKTGNE 165


>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
          Length = 749

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 58/282 (20%)

Query: 4   PPSP-----VHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNG 58
           PPSP     V       P     EKEP    Q  + +P     A  V+ EE     R   
Sbjct: 363 PPSPGNIRPVKREVKVEPEKKDPEKEP----QKVANEPSLKGRAPLVKVEEATVEERTPA 418

Query: 59  EGGSGGNSRQLQPPAAPSPQSYGSPASWSF---APLSAAPSPSSSRSSFSFSAGTAVPSS 115
           E   G  +  + P  A +P    +PA       A +SA  S  ++ +S   SAGT  P  
Sbjct: 419 EPEVGPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEE 478

Query: 116 ASASLSQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGG 175
           A+  L++                                 K R  +E+REKE R      
Sbjct: 479 ATRLLAE---------------------------------KRRLAREQREKEER------ 499

Query: 176 AREAGGASREENGEVKPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKS 235
                   R E  E++   R+++  ++ E    +  E+ +     + +++  +++   + 
Sbjct: 500 -------ERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQRQAEE 552

Query: 236 GKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKRPKMYSKSIQ 277
              + +   E  Q +K ++ + ++  E  +++R K + +  Q
Sbjct: 553 RALREREEAERAQRQKEEEARVREEAERVRQEREKHFQREEQ 594


>gi|56090620 NFKB activating protein-like [Homo sapiens]
          Length = 402

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 156 KSRRPKEKREKERRRHGLGGAREAGGASRE----ENGEVKPLPRDKI----KDKIKERDK 207
           K    +++R KER R G  GA E  G S +    ++ E  P+  ++     K    + + 
Sbjct: 113 KEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDEHTPVEDEEEVTHQKSSSSDSNS 172

Query: 208 EKEREKKKHKVMNEIKKENGEVKILLK------SGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           E+ R+KK  +  N+ K++N   K   +      S  E    +  D   K+VK KKKKK K
Sbjct: 173 EEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDSNSESDTNSDSDDDKKRVKAKKKKKKK 232

Query: 262 EN--EKRKRPKMYSKSIQTICSGLLTDVED 289
           ++  +K+K  K   +S  + C     D+ +
Sbjct: 233 KHKTKKKKNKKTKKESSDSSCKDSEEDLSE 262


>gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
           sapiens]
          Length = 582

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)

Query: 145 PAAAAAASANAKSRRPKEKREKERRRHGLGGAREA--GGASREENGEVKPL-PRDKIKDK 201
           P +  +   + + ++   K++K+R R       E   G   R  + + + L PR K+K K
Sbjct: 256 PTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVK-K 314

Query: 202 IKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           I ++D  KE         +E  KEN +++I   + +EK   +++D  + K K+K KKKHK
Sbjct: 315 IIQKDIIKEA--------SEASKENRDIEI--STEEEKDTGDLKDSSLLKTKRKHKKKHK 364

Query: 262 ENEK 265
           E  K
Sbjct: 365 ERHK 368



 Score = 39.7 bits (91), Expect = 0.012
 Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 191 KPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVK--ILLKSGKEKPKTNIEDLQ 248
           KP+P  ++ ++ K++ K+K R KK+  +  + K+EN +     + K  + +P +   D++
Sbjct: 207 KPIPALRVVEEKKKKKKKKGRMKKEDNI--QAKEENMDTSNTSISKMKRSRPTSEGSDIE 264

Query: 249 IKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGIL-NDNIKDYVGKN 307
             + +K+  KK     K+KR ++ + S+  + +G       + A+ +     +K  + K+
Sbjct: 265 STEPQKQCSKK-----KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKD 319

Query: 308 LDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQ 354
           +  K       EN +   +S +E +   +LK    L+ K+    +H+
Sbjct: 320 I-IKEASEASKENRDIE-ISTEEEKDTGDLKDSSLLKTKRKHKKKHK 364



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 150 AASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERD--K 207
           ++S +A+S  P+ K +K  ++  +   +EA  AS+E          +K    +K+    K
Sbjct: 298 SSSEDAESLAPRSKVKKIIQKDII---KEASEASKENRDIEISTEEEKDTGDLKDSSLLK 354

Query: 208 EKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKK 259
            K + KKKHK  +++ +E   +++L KS  E      E L ++K      KK
Sbjct: 355 TKRKHKKKHKERHKMGEEVIPLRVLSKS--EWMDLKKEYLALQKASMASLKK 404


>gi|109809741 La ribonucleoprotein domain family, member 7 [Homo
           sapiens]
          Length = 582

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)

Query: 145 PAAAAAASANAKSRRPKEKREKERRRHGLGGAREA--GGASREENGEVKPL-PRDKIKDK 201
           P +  +   + + ++   K++K+R R       E   G   R  + + + L PR K+K K
Sbjct: 256 PTSEGSDIESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVK-K 314

Query: 202 IKERDKEKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHK 261
           I ++D  KE         +E  KEN +++I   + +EK   +++D  + K K+K KKKHK
Sbjct: 315 IIQKDIIKEA--------SEASKENRDIEI--STEEEKDTGDLKDSSLLKTKRKHKKKHK 364

Query: 262 ENEK 265
           E  K
Sbjct: 365 ERHK 368



 Score = 39.7 bits (91), Expect = 0.012
 Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 191 KPLPRDKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVK--ILLKSGKEKPKTNIEDLQ 248
           KP+P  ++ ++ K++ K+K R KK+  +  + K+EN +     + K  + +P +   D++
Sbjct: 207 KPIPALRVVEEKKKKKKKKGRMKKEDNI--QAKEENMDTSNTSISKMKRSRPTSEGSDIE 264

Query: 249 IKKVKKKKKKKHKENEKRKRPKMYSKSIQTICSGLLTDVEDQAAKGIL-NDNIKDYVGKN 307
             + +K+  KK     K+KR ++ + S+  + +G       + A+ +     +K  + K+
Sbjct: 265 STEPQKQCSKK-----KKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKD 319

Query: 308 LDTKNYDSKIPENSEFPFVSLKEPRVQNNLKRLDTLEFKQLIHIEHQ 354
           +  K       EN +   +S +E +   +LK    L+ K+    +H+
Sbjct: 320 I-IKEASEASKENRDIE-ISTEEEKDTGDLKDSSLLKTKRKHKKKHK 364



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 150 AASANAKSRRPKEKREKERRRHGLGGAREAGGASREENGEVKPLPRDKIKDKIKERD--K 207
           ++S +A+S  P+ K +K  ++  +   +EA  AS+E          +K    +K+    K
Sbjct: 298 SSSEDAESLAPRSKVKKIIQKDII---KEASEASKENRDIEISTEEEKDTGDLKDSSLLK 354

Query: 208 EKEREKKKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKK 259
            K + KKKHK  +++ +E   +++L KS  E      E L ++K      KK
Sbjct: 355 TKRKHKKKHKERHKMGEEVIPLRVLSKS--EWMDLKKEYLALQKASMASLKK 404


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.130    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,416,719
Number of Sequences: 37866
Number of extensions: 1836538
Number of successful extensions: 17714
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 911
Number of HSP's that attempted gapping in prelim test: 10778
Number of HSP's gapped (non-prelim): 4746
length of query: 846
length of database: 18,247,518
effective HSP length: 111
effective length of query: 735
effective length of database: 14,044,392
effective search space: 10322628120
effective search space used: 10322628120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.