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Search of human proteins with 15811782
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15811782 G patch domain and KOW motifs [Homo sapiens]
(476 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15811782 G patch domain and KOW motifs [Homo sapiens] 956 0.0
gi|8922313 G patch domain containing 2 [Homo sapiens] 47 4e-05
gi|13124883 HsKin17 protein [Homo sapiens] 45 1e-04
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens] 41 0.003
gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens] 41 0.003
gi|5032031 RNA binding motif protein 5 [Homo sapiens] 40 0.005
gi|206597556 kelch domain containing 7B [Homo sapiens] 36 0.087
gi|55742730 storkhead box 2 [Homo sapiens] 36 0.087
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.11
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 35 0.19
gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 35 0.19
gi|33469964 splicing factor 4 [Homo sapiens] 34 0.25
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 34 0.25
gi|157676340 zinc finger protein 142 [Homo sapiens] 34 0.33
gi|150170670 piccolo isoform 2 [Homo sapiens] 34 0.33
gi|150378539 piccolo isoform 1 [Homo sapiens] 34 0.33
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 34 0.33
gi|157785645 SPEG complex locus [Homo sapiens] 34 0.33
gi|28416913 interleukin 27 [Homo sapiens] 33 0.57
gi|56788356 tuftelin interacting protein 11 [Homo sapiens] 33 0.57
gi|8393259 tuftelin interacting protein 11 [Homo sapiens] 33 0.57
gi|28559039 mediator complex subunit 1 [Homo sapiens] 33 0.57
gi|116268091 PHD finger protein 23 [Homo sapiens] 33 0.74
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 33 0.74
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 33 0.74
gi|39725952 angiogenic factor VG5Q [Homo sapiens] 33 0.74
gi|21361684 G patch domain containing 1 [Homo sapiens] 33 0.74
gi|134254459 sodium potassium chloride cotransporter 2 [Homo sap... 32 0.97
gi|183396783 BCL-6 interacting corepressor isoform a [Homo sapiens] 32 0.97
gi|183396785 BCL-6 interacting corepressor isoform b [Homo sapiens] 32 0.97
>gi|15811782 G patch domain and KOW motifs [Homo sapiens]
Length = 476
Score = 956 bits (2471), Expect = 0.0
Identities = 476/476 (100%), Positives = 476/476 (100%)
Query: 1 MADSKEGVLPLTAASTAPISFGFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSV 60
MADSKEGVLPLTAASTAPISFGFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSV
Sbjct: 1 MADSKEGVLPLTAASTAPISFGFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSV 60
Query: 61 KPQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERE 120
KPQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERE
Sbjct: 61 KPQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERE 120
Query: 121 NAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPG 180
NAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPG
Sbjct: 121 NAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPG 180
Query: 181 EGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPRPDEEQEKDKEDQPQG 240
EGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPRPDEEQEKDKEDQPQG
Sbjct: 181 EGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPRPDEEQEKDKEDQPQG 240
Query: 241 LVPGGAVVVLSGPHRGLYGKVEGLDPDNVRAMVRLAVGSRVVTVSEYYLRPVSQQEFDKN 300
LVPGGAVVVLSGPHRGLYGKVEGLDPDNVRAMVRLAVGSRVVTVSEYYLRPVSQQEFDKN
Sbjct: 241 LVPGGAVVVLSGPHRGLYGKVEGLDPDNVRAMVRLAVGSRVVTVSEYYLRPVSQQEFDKN 300
Query: 301 TLDLRQQNGTASSRKTLWNQELYIQQDNSERKRKHLPDRQDGPAAKSEKAAPRSQHWLHR 360
TLDLRQQNGTASSRKTLWNQELYIQQDNSERKRKHLPDRQDGPAAKSEKAAPRSQHWLHR
Sbjct: 301 TLDLRQQNGTASSRKTLWNQELYIQQDNSERKRKHLPDRQDGPAAKSEKAAPRSQHWLHR 360
Query: 361 DLRVRFVDNMYKGGQYYNTKMIIEDVLSPDTCVCRTDEGRVLEGLREDMLETLVPKAEGD 420
DLRVRFVDNMYKGGQYYNTKMIIEDVLSPDTCVCRTDEGRVLEGLREDMLETLVPKAEGD
Sbjct: 361 DLRVRFVDNMYKGGQYYNTKMIIEDVLSPDTCVCRTDEGRVLEGLREDMLETLVPKAEGD 420
Query: 421 RVMVVLGPQTGRVGHLLSRDRARSRALVQLPRENQVVELHYDAICQYMGPSDTDDD 476
RVMVVLGPQTGRVGHLLSRDRARSRALVQLPRENQVVELHYDAICQYMGPSDTDDD
Sbjct: 421 RVMVVLGPQTGRVGHLLSRDRARSRALVQLPRENQVVELHYDAICQYMGPSDTDDD 476
>gi|8922313 G patch domain containing 2 [Homo sapiens]
Length = 528
Score = 47.0 bits (110), Expect = 4e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPT 218
G ML+ MGW PG G+GR + +P RPKGLGLG L ++ + T T
Sbjct: 471 GNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKSTSATTT 521
>gi|13124883 HsKin17 protein [Homo sapiens]
Length = 393
Score = 45.1 bits (105), Expect = 1e-04
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 309 GTASSRKTLWNQELYIQQDNSERKRKHLPDRQDGPAAKSEKAAPRSQHWLHRDLRVRFVD 368
G+++S K + + Q ++K+ L + + + +K R+ +WL ++ V+ +
Sbjct: 234 GSSASVKRKESSQSSTQSKEKKKKKSALDEIME--IEEEKKRTARTDYWLQPEIIVKIIT 291
Query: 369 NMYKGGQYYNTKMIIEDVLSPDTCVCR-TDEGRVLEGLREDMLETLVPKAEGDRVMVVLG 427
G +Y+ K I+++V+ T V + D G L+ L + LET++P A G R++V+ G
Sbjct: 292 KKL-GEKYHKKKAIVKEVIDKYTAVVKMIDSGDKLK-LDQTHLETVIP-APGKRILVLNG 348
Query: 428 PQTGRVGHLLS 438
G G L S
Sbjct: 349 GYRGNEGTLES 359
>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
Length = 930
Score = 40.8 bits (94), Expect = 0.003
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 155 EEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGA 207
E+ + + + G ML+ MGWK G G+GR +V P R +G GLGA
Sbjct: 849 EQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 901
>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
Length = 852
Score = 40.8 bits (94), Expect = 0.003
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 155 EEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGA 207
E+ + + + G ML+ MGWK G G+GR +V P R +G GLGA
Sbjct: 771 EQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 823
>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
Length = 815
Score = 40.0 bits (92), Expect = 0.005
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 155 EEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGA 207
E+ + + G ML+ MGW+ G G+GR + P +R KG GLGA
Sbjct: 734 EQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGA 786
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 35.8 bits (81), Expect = 0.087
Identities = 47/190 (24%), Positives = 72/190 (37%), Gaps = 22/190 (11%)
Query: 22 GFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPKELVIPLIQNGHRRQ 81
G + + S PSP+ L+ EG +S+ P L + G +
Sbjct: 55 GLVEAGGQPQPRSSETNGSPSPDPPPGLRG-EGTREKSLDP------LPQAAMPRGPAQP 107
Query: 82 PPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEE--RENAGVDPTLAIPMIQKGCTP 139
P RPPGP+ + A V Q K E S E+ R A DP P
Sbjct: 108 PAQRPPGPAASSSARRSQPVPQLRKRSRCEIAPSSEQEVRPAASGDPQGEAP-------- 159
Query: 140 SGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLR 199
GEG R+ + E+ EA + + + R GW EG + ++ ++P +
Sbjct: 160 -GEGGSPAGRSGALTEKQE-EARKLMVF---LQRPGGWGVVEGPRKPSSRALEPATAAAL 214
Query: 200 PKGLGLGANL 209
+ L LG+ L
Sbjct: 215 RRRLDLGSCL 224
>gi|55742730 storkhead box 2 [Homo sapiens]
Length = 926
Score = 35.8 bits (81), Expect = 0.087
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 40 GPSPEEKDFLKTVEGRELQSVKPQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADG 99
G + E+ D L EG + S ++ P P+ GH+ + P P G +G +A+G
Sbjct: 618 GKNKEDHDTLTLAEGVKKLSPSDRQVPHSSREPV---GHKEESPKGPGGGPAASGGVAEG 674
Query: 100 VVSQAVKELIAESKKSLEERENAGVDPTLAIPM 132
+ + + + SL++R+ TL P+
Sbjct: 675 IANGRLVQHHGAEPSSLDKRKEIFSKDTLFKPL 707
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.4 bits (80), Expect = 0.11
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 30/131 (22%)
Query: 41 PSPEEKDFLKTVEGRELQSVKPQEAPKELV----IPLIQNGHRRQPPARPPGPSTDTGAL 96
P PE+K + EL VK E PKE+V +PL+ PPA+ P
Sbjct: 10700 PVPEKKAPAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEAPPAKVP--------- 10750
Query: 97 ADGVVSQAVKELIAESKKSLEERENAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEE 156
+ KE++ E K ++ ++ P +P + K + E A VPE
Sbjct: 10751 ------EVPKEVVPEKKVAVPKKPEV---PPAKVPEVPK------KPVLEEKPAVPVPER 10795
Query: 157 ANYEAVPVEAY 167
A E+ P E Y
Sbjct: 10796 A--ESPPPEVY 10804
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 34.7 bits (78), Expect = 0.19
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 22 GFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPK---ELVIPLIQNGH 78
G T +SA R D DG EE++ + E R+ S ++ + + P +++G
Sbjct: 10 GDTSSSAAEREEDRKDG-----EEQEEPRGKEERQEPSTTARKVGRPGRKRKHPPVESGD 64
Query: 79 RRQPPA---RPPGPSTDTGA---LADGVVS-----QAVKELIAESKKSLEERENAGVDPT 127
+ PA + P + D+GA L +G + Q + A +K E G T
Sbjct: 65 TPKDPAVISKSPSMAQDSGASELLPNGDLEKRSEPQPEEGSPAGGQKGGAPAEGEGAAET 124
Query: 128 L--AIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWK 178
L A ++ GC EG + A +E N E++ +E + G+GW+
Sbjct: 125 LPEASRAVENGCCTPKEGRGAPAEAGKEQKETNIESMKMEGSRGRLRGGLGWE 177
>gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 34.7 bits (78), Expect = 0.19
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 21/173 (12%)
Query: 22 GFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPK---ELVIPLIQNGH 78
G T +SA R D DG EE++ + E R+ S ++ + + P +++G
Sbjct: 10 GDTSSSAAEREEDRKDG-----EEQEEPRGKEERQEPSTTARKVGRPGRKRKHPPVESGD 64
Query: 79 RRQPPA---RPPGPSTDTGA---LADGVVS-----QAVKELIAESKKSLEERENAGVDPT 127
+ PA + P + D+GA L +G + Q + A +K E G T
Sbjct: 65 TPKDPAVISKSPSMAQDSGASELLPNGDLEKRSEPQPEEGSPAGGQKGGAPAEGEGAAET 124
Query: 128 L--AIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWK 178
L A ++ GC EG + A +E N E++ +E + G+GW+
Sbjct: 125 LPEASRAVENGCCTPKEGRGAPAEAGKEQKETNIESMKMEGSRGRLRGGLGWE 177
>gi|33469964 splicing factor 4 [Homo sapiens]
Length = 645
Score = 34.3 bits (77), Expect = 0.25
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 154 PEEANYEA--VPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGANLTE 211
P+ + Y+ + VE G ML MGWK GEG+G + Q +K VN G +
Sbjct: 550 PDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLG-SEGQGIKNPVNK--------GTTTVD 600
Query: 212 AQALTPTGPSRMPRPDEEQE 231
P+ + + D+E E
Sbjct: 601 GAGFGIDRPAELSKEDDEYE 620
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 34.3 bits (77), Expect = 0.25
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 54 GRELQSVKPQEAPKELVIPLIQNGHRRQP-------PARPPGPSTDTGALADGVVSQAVK 106
GR + P+ P EL + + R+QP PA P P+T TG A G + +
Sbjct: 1782 GRPARDRGPESRPTELSLEELSISARQQPTPLTPAQPAPAPAPATTTGTRAGGHPEEPLS 1841
Query: 107 ELIAESKKSLEEREN 121
L + +K LE+ E+
Sbjct: 1842 RL-SRKRKLLEDTES 1855
>gi|157676340 zinc finger protein 142 [Homo sapiens]
Length = 1687
Score = 33.9 bits (76), Expect = 0.33
Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 81 QPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERENA------GVDPTLAIPMIQ 134
Q ARP GP + G + D + QA+ E+ E +E A G P+ A + +
Sbjct: 632 QLSARPEGPGHEPGTVVDPSLDQALPEMSEEVNTGRQEGSEAPHGGDLGGSPSPA-EVEE 690
Query: 135 KGCTPSGEG------ADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIG 184
CT E + +EP E V E A E P+ G L G EGIG
Sbjct: 691 GSCTLHLEALGVELESVTEPPLEEVTETAPMEFRPLGLEGPDGLEGPELSSFEGIG 746
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 33.9 bits (76), Expect = 0.33
Identities = 50/190 (26%), Positives = 72/190 (37%), Gaps = 26/190 (13%)
Query: 61 KPQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERE 120
KP P L PL Q +PP +PPG +T A G ++ +E S +
Sbjct: 330 KPPAQPSGLTKPLAQQPGTVKPPVQPPG-TTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP 388
Query: 121 NAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPG 180
A P P + G TP+ + ++P + V P GL P
Sbjct: 389 KALAQP----PGV--GKTPAQQPGPAKPPTQQVGTPKPLAQQP----GLQ-------SPA 431
Query: 181 EGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPT-GPSRMP---RPDEEQEKDKED 236
+ G T V +P + + G G T AQ PT PS++P +P +Q +
Sbjct: 432 KAPGPTKTPVQQPGPGKIPAQQAGPGK--TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKP 489
Query: 237 QPQGLVPGGA 246
PQ PG A
Sbjct: 490 PPQ--QPGSA 497
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 33.9 bits (76), Expect = 0.33
Identities = 50/190 (26%), Positives = 72/190 (37%), Gaps = 26/190 (13%)
Query: 61 KPQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERE 120
KP P L PL Q +PP +PPG +T A G ++ +E S +
Sbjct: 330 KPPAQPSGLTKPLAQQPGTVKPPVQPPG-TTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP 388
Query: 121 NAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPG 180
A P P + G TP+ + ++P + V P GL P
Sbjct: 389 KALAQP----PGV--GKTPAQQPGPAKPPTQQVGTPKPLAQQP----GLQ-------SPA 431
Query: 181 EGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPT-GPSRMP---RPDEEQEKDKED 236
+ G T V +P + + G G T AQ PT PS++P +P +Q +
Sbjct: 432 KAPGPTKTPVQQPGPGKIPAQQAGPGK--TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKP 489
Query: 237 QPQGLVPGGA 246
PQ PG A
Sbjct: 490 PPQ--QPGSA 497
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 33.9 bits (76), Expect = 0.33
Identities = 36/131 (27%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 38 GAGPSPEEKDFLKTVEGR--ELQSVKPQEAPKELVIPLI----QNGHRRQPPARPPGPST 91
G PE+ L+ G +L P AP E + PL+ R PP PP P
Sbjct: 728 GCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPPP 787
Query: 92 DTGALADGVVSQAVKELIAESKKSLEERENAGVDP-----TLAIPMIQKGCTPSGEGADS 146
A AD S +A L + G P P +G P G A+
Sbjct: 788 PPRAPADPAASPDPPSAVASPGSGL---SSPGPKPGDSGYETETPFSPEGAFPGGGAAEE 844
Query: 147 E--PRAETVPE 155
E PR PE
Sbjct: 845 EGVPRPRAPPE 855
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.9 bits (76), Expect = 0.33
Identities = 50/217 (23%), Positives = 77/217 (35%), Gaps = 21/217 (9%)
Query: 39 AGPSPEEKDFLKTVEGRELQSVKPQEAPKELVIPLIQNGHRRQPPARPPGPSTD---TGA 95
AG SP + + G +S P+ P+EL L + P R P P G
Sbjct: 2001 AGASPRRGELRR---GSSAESALPRAGPRELGRGLHKAASVELPQRRSPSPGATRLARGG 2057
Query: 96 LADGVVSQAVKELIAESKKSLEERENAGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPE 155
L +G +Q ++ L ++ L G L P+++ + G D E
Sbjct: 2058 LGEGEYAQRLQAL---RQRLLRGGPEDGKVSGLRGPLLE---SLGGRARDPRMARAASSE 2111
Query: 156 EANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFN-----QVVKPRVNSLRPKGLGLGANLT 210
A + P+E GL E GR ++ R+ + R + + L+
Sbjct: 2112 AAPHHQPPLENRGLQKSSSFSQGEAEPRGRHRRAGAPLEIPVARLGARRLQESPSLSALS 2171
Query: 211 EAQALTPTGPS----RMPRPDEEQEKDKEDQPQGLVP 243
EAQ +P PS P+ E D PQ P
Sbjct: 2172 EAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAP 2208
>gi|28416913 interleukin 27 [Homo sapiens]
Length = 243
Score = 33.1 bits (74), Expect = 0.57
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 223 MPRPDEEQEKDKEDQPQGLVPGGAVVVLSGP 253
+P +EE+E+++E++ +GL+PG L GP
Sbjct: 162 LPEEEEEEEEEEEEERKGLLPGALGSALQGP 192
>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 0.57
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLG-LGANLTEAQALTPTGPSRMPRP 226
G +L+ MG+ PG G+G+ ++ P + + + KG G +GA +E T P
Sbjct: 153 GQKLLQKMGYVPGRGLGKNAQGIINP-IEAKQRKGKGAVGAYGSER---TTQSMQDFPVV 208
Query: 227 DEEQEKDKEDQPQ 239
D E+E ++E Q +
Sbjct: 209 DSEEEAEEEFQKE 221
>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 0.57
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLG-LGANLTEAQALTPTGPSRMPRP 226
G +L+ MG+ PG G+G+ ++ P + + + KG G +GA +E T P
Sbjct: 153 GQKLLQKMGYVPGRGLGKNAQGIINP-IEAKQRKGKGAVGAYGSER---TTQSMQDFPVV 208
Query: 227 DEEQEKDKEDQPQ 239
D E+E ++E Q +
Sbjct: 209 DSEEEAEEEFQKE 221
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 33.1 bits (74), Expect = 0.57
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 2 ADSKEGVLPLTAASTAPISFGFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVK 61
+ EG +S+ S G + +S + + SG G SP K L + G +K
Sbjct: 1116 SSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSS--GSSSTKMK 1173
Query: 62 PQEAPKELVIPLIQNGHRRQPPARPPGPS 90
PQ P L+ P + + +RPPG S
Sbjct: 1174 PQGKPSSLMNPSLSKPNISPSHSRPPGGS 1202
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 32.7 bits (73), Expect = 0.74
Identities = 56/240 (23%), Positives = 90/240 (37%), Gaps = 48/240 (20%)
Query: 41 PSPEEKDFLKTVEGRELQSVKPQE------APKEL-----VIPLIQNGHRRQPPARP--P 87
PS EE D+ + L+ + AP +L + ++ RR A P P
Sbjct: 50 PSKEESDWPASGSSSPLRGESAADSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPTQP 109
Query: 88 GPSTDTGALADGVVSQAVKELIAESKKSLEERENAGVDPTLAIPMIQKGCT--------- 138
GP T + S + E + + K SL + + P +A P+ T
Sbjct: 110 GPPRSTFSRLQAPDSATLLEKM-KLKDSLFDLDG----PKVASPLSPTSLTHTSRPPAAL 164
Query: 139 ---PSGEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRV 195
P +G S P + + N + P G +LR PG+G R+ ++ K +
Sbjct: 165 TPVPLSQGDLSHPPRKK--DRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRS--RIKKSKK 220
Query: 196 NSLRPKGLGLGANLTEAQALTPTGPSRMPRPD------EEQEKDKEDQPQGLVPGGAVVV 249
L+ G L P GP + P D EE+E+++E++ V GG V
Sbjct: 221 RKLKKAERG--------DRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGGEAPV 272
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 32.7 bits (73), Expect = 0.74
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGAN 208
G ML+ MGWK G G+G + +P +G GLGA+
Sbjct: 1015 GFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGAD 1055
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 32.7 bits (73), Expect = 0.74
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGAN 208
G ML+ MGWK G G+G + +P +G GLGA+
Sbjct: 1015 GFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGAD 1055
>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
Length = 714
Score = 32.7 bits (73), Expect = 0.74
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLG 206
G ML MGWK GEG+G+ + P LR GLG
Sbjct: 623 GRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLG 661
>gi|21361684 G patch domain containing 1 [Homo sapiens]
Length = 931
Score = 32.7 bits (73), Expect = 0.74
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPRPD 227
G +LR MGWK G+G+G + +PR P G L + G PD
Sbjct: 156 GFELLRKMGWKEGQGVGPRVKR--RPRRQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPD 213
Query: 228 EEQEKDKEDQPQGLVPGGAVVVLS----GPHRGLYG 259
K+ P P V L+ PH+ L+G
Sbjct: 214 NVTFAPKDVTPVDFTPKDNVHGLAYKGLDPHQALFG 249
>gi|134254459 sodium potassium chloride cotransporter 2 [Homo
sapiens]
Length = 1099
Score = 32.3 bits (72), Expect = 0.97
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 185 RTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPR----PDEEQEKDKEDQPQG 240
R + P+VN RP L + L + A+TP+ R+ P +EQ ++KED G
Sbjct: 116 RNTGSISGPKVN--RPSLLEIHEQLAKNVAVTPSSADRVANGDGIPGDEQAENKEDDQAG 173
Query: 241 LVPGGAV 247
+V G V
Sbjct: 174 VVKFGWV 180
>gi|183396783 BCL-6 interacting corepressor isoform a [Homo sapiens]
Length = 1721
Score = 32.3 bits (72), Expect = 0.97
Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 42/191 (21%)
Query: 62 PQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEEREN 121
P EAP++ +P+ + RQP + PP AD V S
Sbjct: 1091 PFEAPEDKDLPVEKYFVERQPVSEPP---------ADQVASDMPH--------------- 1126
Query: 122 AGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAV---------PVEAYGLAML 172
PTL + +K SG+ + +E AE VPE+ +A P + L L
Sbjct: 1127 ---SPTLRVDRKRK---VSGDSSHTETTAEEVPEDPLLKAKRRRVSKGLHPKKQRHLLHL 1180
Query: 173 RGMGWKP--GEGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPRPDEEQ 230
R W+ G+ Q K + +P+ + G N+TE + ++ R E+
Sbjct: 1181 RER-WEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSEE 1239
Query: 231 EKDKEDQPQGL 241
D QGL
Sbjct: 1240 SLKPSDNEQGL 1250
>gi|183396785 BCL-6 interacting corepressor isoform b [Homo sapiens]
Length = 1703
Score = 32.3 bits (72), Expect = 0.97
Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 42/191 (21%)
Query: 62 PQEAPKELVIPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEEREN 121
P EAP++ +P+ + RQP + PP AD V S
Sbjct: 1073 PFEAPEDKDLPVEKYFVERQPVSEPP---------ADQVASDMPH--------------- 1108
Query: 122 AGVDPTLAIPMIQKGCTPSGEGADSEPRAETVPEEANYEAV---------PVEAYGLAML 172
PTL + +K SG+ + +E AE VPE+ +A P + L L
Sbjct: 1109 ---SPTLRVDRKRK---VSGDSSHTETTAEEVPEDPLLKAKRRRVSKGLHPKKQRHLLHL 1162
Query: 173 RGMGWKP--GEGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPTGPSRMPRPDEEQ 230
R W+ G+ Q K + +P+ + G N+TE + ++ R E+
Sbjct: 1163 RER-WEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSEE 1221
Query: 231 EKDKEDQPQGL 241
D QGL
Sbjct: 1222 SLKPSDNEQGL 1232
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,826,734
Number of Sequences: 37866
Number of extensions: 1080399
Number of successful extensions: 3688
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 3613
Number of HSP's gapped (non-prelim): 157
length of query: 476
length of database: 18,247,518
effective HSP length: 106
effective length of query: 370
effective length of database: 14,233,722
effective search space: 5266477140
effective search space used: 5266477140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.