GPKOW 6431

Name: GPKOW	Sequence: fasta or formatted (476aa)		NCBI GI: 15811782
Description: G patch domain and KOW motifs		Referenced in: RNA-binding Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 36 2 C cysteine 0.8 4 1 D aspartate 6.5 31 3 E glutamate 8.2 39 2 F phenylalanine 1.3 6 1 G glycine 9.0 43 2 H histidine 1.5 7 1 I isoleucine 2.3 11 2 K lysine 5.0 24 2 L leucine 8.8 42 2 M methionine 2.3 11 1 N asparagine 2.9 14 1 P proline 8.0 38 2 Q glutamine 5.3 25 2 R arginine 8.4 40 3 S serine 5.9 28 2 T threonine 5.0 24 1 V valine 8.2 39 3 W tryptophan 0.6 3 1 Y tyrosine 2.3 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 G patch domain and KOW motifs GPATCH2 0.024 G patch domain containing 2 KIN 0.021 HsKin17 protein RBM10 0.017 RNA binding motif protein 10 isoform 1 RBM10 0.017 RNA binding motif protein 10 isoform 2 RBM5 0.016 RNA binding motif protein 5 KLHDC7B 0.012 kelch domain containing 7B STOX2 0.012 storkhead box 2 TTN 0.011 titin isoform N2-A DNMT3A 0.011 DNA cytosine methyltransferase 3 alpha isoform a [Ho... DNMT3A 0.011 DNA cytosine methyltransferase 3 alpha isoform a [Ho... SF4 0.010 splicing factor 4 CABIN1 0.010 calcineurin binding protein 1 ZNF142 0.010 zinc finger protein 142 PCLO 0.010 piccolo isoform 2 PCLO 0.010 piccolo isoform 1 LMTK3 0.010 lemur tyrosine kinase 3 SPEG 0.010 SPEG complex locus IL27 0.009 interleukin 27 TFIP11 0.009 tuftelin interacting protein 11 TFIP11 0.009 tuftelin interacting protein 11 MED1 0.009 mediator complex subunit 1 PHF23 0.009 PHD finger protein 23 SFRS14 0.009 splicing factor, arginine/serine-rich 14 SFRS14 0.009 splicing factor, arginine/serine-rich 14 AGGF1 0.009 angiogenic factor VG5Q GPATCH1 0.009 G patch domain containing 1 SLC12A1 0.008 sodium potassium chloride cotransporter 2 BCOR 0.008 BCL-6 interacting corepressor isoform a BCOR 0.008 BCL-6 interacting corepressor isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.