Guide to the Human Genome
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Name: LOC732434 Sequence: fasta or formatted (261aa) NCBI GI: 239752557
Description:

PREDICTED: similar to Ovostatin homolog 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         16           2
 C cysteine            2.3          6           1
 D aspartate           5.0         13           2
 E glutamate           5.4         14           1
 F phenylalanine       7.7         20           2
 G glycine             2.7          7           1
 H histidine           2.3          6           1
 I isoleucine          3.8         10           1
 K lysine              4.2         11           1
 L leucine            11.5         30           3
 M methionine          1.5          4           2
 N asparagine          6.1         16           1
 P proline             4.6         12           1
 Q glutamine           4.6         12           2
 R arginine            3.1          8           1
 S serine             12.3         32           3
 T threonine           5.0         13           2
 V valine              6.9         18           2
 W tryptophan          1.1          3           1
 Y tyrosine            3.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Ovostatin homolog 2 
LOC100133592          0.897   PREDICTED: similar to ovostatin-2 
OVOS                  0.883   PREDICTED: ovostatin 
OVOS2                 0.869   PREDICTED: ovostatin 2 
LOC732435             0.726   PREDICTED: similar to Ovostatin homolog 2 
LOC732435             0.445   PREDICTED: similar to Ovostatin homolog 2 
PZP                   0.268   pregnancy-zone protein 
A2M                   0.258   alpha-2-macroglobulin precursor 
A2ML1                 0.207   alpha-2-macroglobulin-like 1 
CPAMD8                0.058   C3 and PZP-like, alpha-2-macroglobulin domain conta...
CD109                 0.044   CD109 antigen isoform 3 precursor 
CD109                 0.044   CD109 antigen isoform 2 precursor 
CD109                 0.044   CD109 antigen isoform 1 precursor 
C3                    0.020   complement component 3 precursor 
LOC100133511          0.020   PREDICTED: similar to complement component C3, part...
ACRC                  0.010   ACRC protein 
DYM                   0.010   dymeclin 
SEPN1                 0.006   selenoprotein N, 1 isoform 2 precursor 
SEPN1                 0.006   selenoprotein N, 1 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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