C1orf38 6367

Name: C1orf38	Sequence: fasta or formatted (643aa)		NCBI GI: 157738677
Description: basement membrane-induced gene isoform 3		Not currently referenced in the text
Other entries for this name: alt prot {260aa} basement membrane-induced gene isoform 1 alt prot {123aa} basement membrane-induced gene isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 32 1 C cysteine 2.2 14 2 D aspartate 4.5 29 3 E glutamate 8.7 56 4 F phenylalanine 3.6 23 1 G glycine 6.1 39 2 H histidine 2.5 16 1 I isoleucine 3.4 22 1 K lysine 4.8 31 1 L leucine 11.8 76 3 M methionine 1.7 11 1 N asparagine 0.9 6 1 P proline 9.0 58 3 Q glutamine 5.6 36 2 R arginine 6.4 41 3 S serine 7.5 48 2 T threonine 5.4 35 2 V valine 7.8 50 2 W tryptophan 1.1 7 1 Y tyrosine 2.0 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 basement membrane-induced gene isoform 3 C1orf38 0.323 basement membrane-induced gene isoform 1 THEMIS 0.198 thymocyte selection pathway associated C1orf38 0.106 basement membrane-induced gene isoform 2 SERTAD3 0.006 RPA-binding trans-activator SERTAD3 0.006 RPA-binding trans-activator TRERF1 0.005 transcriptional regulating factor 1 LOC727768 0.005 PREDICTED: similar to tektin 4 ZFHX3 0.005 AT-binding transcription factor 1 G3BP2 0.005 Ras-GTPase activating protein SH3 domain-binding pro... G3BP2 0.005 Ras-GTPase activating protein SH3 domain-binding pro... AEBP2 0.005 AE binding protein 2 isoform b AEBP2 0.005 AE binding protein 2 isoform a NEK5 0.005 NIMA-related kinase 5 TTN 0.005 titin isoform N2-A ARHGEF5 0.005 rho guanine nucleotide exchange factor 5 KIAA0182 0.005 genetic suppressor element 1 isoform 2 KIAA0182 0.005 genetic suppressor element 1 isoform 1 GATAD2B 0.005 GATA zinc finger domain containing 2B ZNF227 0.004 zinc finger protein 227 BRD2 0.004 bromodomain containing 2 BRD2 0.004 bromodomain containing 2 PPARGC1B 0.004 peroxisome proliferator-activated receptor gamma, co... TNRC18 0.004 trinucleotide repeat containing 18 DLAT 0.004 dihydrolipoamide S-acetyltransferase CDH17 0.004 cadherin 17 precursor CDH17 0.004 cadherin 17 precursor BRD3 0.004 bromodomain containing protein 3 RNF25 0.004 ring finger protein 25 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.