Guide to the Human Genome
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Name: OGDHL Sequence: fasta or formatted (1010aa) NCBI GI: 221316661
Description:

oxoglutarate dehydrogenase-like isoform a

Referenced in:

Amino Acid Catabolism
TCA Cycle

Other entries for this name:
alt prot [953aa] oxoglutarate dehydrogenase-like isoform b
alt prot [801aa] oxoglutarate dehydrogenase-like isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         73           3
 C cysteine            1.5         15           1
 D aspartate           5.7         58           2
 E glutamate           6.8         69           3
 F phenylalanine       5.1         52           2
 G glycine             5.9         60           4
 H histidine           3.5         35           2
 I isoleucine          5.0         51           2
 K lysine              4.7         47           2
 L leucine             8.4         85           3
 M methionine          2.7         27           1
 N asparagine          3.4         34           2
 P proline             5.4         55           2
 Q glutamine           4.4         44           1
 R arginine            6.4         65           3
 S serine              7.2         73           2
 T threonine           4.9         49           3
 V valine              7.1         72           3
 W tryptophan          1.5         15           1
 Y tyrosine            3.1         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxoglutarate dehydrogenase-like isoform a 
OGDHL                 0.928   oxoglutarate dehydrogenase-like isoform b 
OGDHL                 0.796   oxoglutarate dehydrogenase-like isoform c 
OGDH                  0.781   oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...
DHTKD1                0.274   dehydrogenase E1 and transketolase domain containing...
OGDH                  0.256   oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...
RASGRF1               0.004   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.004   Ras protein-specific guanine nucleotide-releasing fa...
LOC100290951          0.003   PREDICTED: hypothetical protein XP_002346501 
CCDC87                0.003   coiled-coil domain containing 87 
HMCN2                 0.003   PREDICTED: hemicentin 2 
HMCN2                 0.003   PREDICTED: hemicentin 2 
HMCN2                 0.003   PREDICTED: hemicentin 2 
EPHB2                 0.003   ephrin receptor EphB2 isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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