Guide to the Human Genome
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Name: FGL1 Sequence: fasta or formatted (312aa) NCBI GI: 42544189
Description:

fibrinogen-like 1 precursor

Referenced in:

Coagulation
Liver

Other entries for this name:
alt mRNA [312aa] fibrinogen-like 1 precursor
alt mRNA [312aa] fibrinogen-like 1 precursor
alt mRNA [312aa] fibrinogen-like 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         15           1
 C cysteine            1.6          5           1
 D aspartate           6.7         21           1
 E glutamate           6.7         21           2
 F phenylalanine       5.4         17           1
 G glycine             8.0         25           3
 H histidine           2.2          7           1
 I isoleucine          4.2         13           1
 K lysine              6.7         21           1
 L leucine             6.7         21           2
 M methionine          1.9          6           1
 N asparagine          7.1         22           1
 P proline             1.9          6           1
 Q glutamine           5.8         18           3
 R arginine            4.5         14           2
 S serine              6.4         20           1
 T threonine           4.5         14           2
 V valine              5.4         17           2
 W tryptophan          3.8         12           2
 Y tyrosine            5.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibrinogen-like 1 precursor 
FGL1                  1.000   fibrinogen-like 1 precursor 
FGL1                  1.000   fibrinogen-like 1 precursor 
FGL1                  1.000   fibrinogen-like 1 precursor 
FGG                   0.303   fibrinogen, gamma chain isoform gamma-B precursor [H...
FGG                   0.303   fibrinogen, gamma chain isoform gamma-A precursor [H...
FIBCD1                0.296   fibrinogen C domain containing 1 
FIBCD1                0.296   fibrinogen C domain containing 1 
ANGPTL7               0.285   angiopoietin-like 7 
ANGPTL1               0.281   angiopoietin-like 1 precursor 
ANGPTL2               0.279   angiopoietin-like 2 precursor 
FGA                   0.278   fibrinogen, alpha polypeptide isoform alpha-E preprop...
FGL2                  0.262   fibrinogen-like 2 precursor 
FGB                   0.261   fibrinogen, beta chain preproprotein 
FCN1                  0.261   ficolin 1 precursor 
ANGPT1                0.254   angiopoietin 1 
ANGPT2                0.253   angiopoietin 2 isoform c precursor 
ANGPT2                0.253   angiopoietin 2 isoform b precursor 
ANGPT2                0.253   angiopoietin 2 isoform a precursor 
MFAP4                 0.253   microfibrillar-associated protein 4 
ANGPT4                0.248   angiopoietin 4 
FCN2                  0.245   ficolin 2 isoform b precursor 
FCN2                  0.245   ficolin 2 isoform a precursor 
TNR                   0.231   tenascin R 
ANGPTL6               0.226   angiopoietin-like 6 
ANGPTL4               0.214   angiopoietin-like 4 protein isoform a precursor [Hom...
TNC                   0.214   tenascin C precursor 
FCN3                  0.209   ficolin 3 isoform 2 precursor 
FCN3                  0.209   ficolin 3 isoform 1 precursor 
TNXB                  0.207   tenascin XB isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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