Guide to the Human Genome
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Name: ANGPTL1 Sequence: fasta or formatted (491aa) NCBI GI: 4757752
Description:

angiopoietin-like 1 precursor

Referenced in:

Cardiovascular System

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         17           1
 C cysteine            1.6          8           1
 D aspartate           5.7         28           1
 E glutamate           6.1         30           2
 F phenylalanine       3.5         17           2
 G glycine             7.3         36           2
 H histidine           2.2         11           1
 I isoleucine          5.3         26           2
 K lysine              6.7         33           2
 L leucine             9.2         45           2
 M methionine          3.5         17           2
 N asparagine          6.3         31           2
 P proline             4.7         23           3
 Q glutamine           5.3         26           2
 R arginine            5.9         29           2
 S serine              5.7         28           2
 T threonine           5.3         26           2
 V valine              5.5         27           2
 W tryptophan          2.2         11           2
 Y tyrosine            4.5         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   angiopoietin-like 1 precursor 
ANGPTL2               0.556   angiopoietin-like 2 precursor 
ANGPTL6               0.362   angiopoietin-like 6 
ANGPT2                0.194   angiopoietin 2 isoform b precursor 
ANGPT1                0.194   angiopoietin 1 
ANGPT2                0.194   angiopoietin 2 isoform a precursor 
ANGPT2                0.187   angiopoietin 2 isoform c precursor 
FIBCD1                0.183   fibrinogen C domain containing 1 
FIBCD1                0.183   fibrinogen C domain containing 1 
ANGPTL7               0.183   angiopoietin-like 7 
FGL1                  0.180   fibrinogen-like 1 precursor 
FGL1                  0.180   fibrinogen-like 1 precursor 
FGL1                  0.180   fibrinogen-like 1 precursor 
FGL1                  0.180   fibrinogen-like 1 precursor 
ANGPT4                0.180   angiopoietin 4 
FGA                   0.171   fibrinogen, alpha polypeptide isoform alpha-E preprop...
MFAP4                 0.169   microfibrillar-associated protein 4 
FCN2                  0.162   ficolin 2 isoform b precursor 
FCN2                  0.162   ficolin 2 isoform a precursor 
TNR                   0.162   tenascin R 
FCN3                  0.158   ficolin 3 isoform 1 precursor 
FGB                   0.157   fibrinogen, beta chain preproprotein 
FCN3                  0.155   ficolin 3 isoform 2 precursor 
FGG                   0.154   fibrinogen, gamma chain isoform gamma-B precursor [H...
FGG                   0.154   fibrinogen, gamma chain isoform gamma-A precursor [H...
FGL2                  0.149   fibrinogen-like 2 precursor 
FCN1                  0.149   ficolin 1 precursor 
ANGPTL3               0.146   angiopoietin-like 3 precursor 
TNN                   0.146   tenascin N 
TNXB                  0.142   tenascin XB isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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